ID: hsa-mir-3929
chr18:33514001-33514155 -
Display Libraries
(1)
AGO1.ip 		(2)
AGO2.ip 		(5)
B-CELL 		(1)
BRAIN 		(19)
BREAST 		(36)
CELL-LINE 		(3)
CERVIX 		(4)
HELA 		(2)
LIVER 		(1)
OTHER 		(2)
OVARY 		(1)
PLACENTA 		(15)
SKIN 		(3)
TESTES 		(2)
THYMUS 		(1)
UTERUS 		(1)
XRN.ip
Showing top 209 reads
ATGCTACTCAGAACAGCACACAATTTAAAACGTATGAGTTGGCCAGGTGCAGTGGCTCACACCAGTAATCCCAGCACTTTGGGAGGCTGATGTGAGTAGACCACTTGAGCCCGGGAGTTCAAGACCAGCCTGGGCAACATGGCGAACTCCTATCT
..................................................(((((((((((.((((..((((((....)))))).)))).))))))....)))))..................................................
..................................................51....................................................105................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189786SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189787SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		TAX577453(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR029125(GSM416754)
U2OS. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR029129(GSM416758)
SW480. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029131(GSM416760)
MCF7. (cell line)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343334SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR037936(GSM510474)
293cand1. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR139195(SRX050645)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR139216(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR139208(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR139198(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR139214(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR191484(GSM715594)
12genomic small RNA (size selected RNA from t. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR139192(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR139211(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191539(GSM715649)
61genomic small RNA (size selected RNA from t. (breast)		SRR038863(GSM458546)
MM603. (cell line)		SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)		SRR038862(GSM458545)
MM472. (cell line)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR139210(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		SRR191532(GSM715642)
135genomic small RNA (size selected RNA from . (breast)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR040028(GSM532913)
G026N. (cervix)		SRR191468(GSM715578)
116genomic small RNA (size selected RNA from . (breast)		SRR040023(GSM532908)
G575T. (cervix)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189785SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR029130(GSM416759)
DLD2. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
..................................................................................GAGGCTGATGTGAGTAGACCACTTt................................................25T25.0010.0013.001.00-1.00--------8.00---------------------------------------------------------1.00----------------1.00--------------
..................................................................................GAGGCTGATGTGAGTAGACCACT..................................................23120.0020.00-1.00----4.00-------2.00-1.00-1.00--3.00---1.00-1.00-----1.00--1.002.00-------------1.00--------------------------------1.00-----------------
..................................................................................GAGGCTGATGTGAGTAGACC.....................................................20114.0014.00---2.00-1.001.00-3.00--1.00-----------1.00----2.00-------------------------1.00----1.00------------------1.00-----------------------
..................................................................................GAGGCTGATGTGAGTAGACCAC...................................................22114.0014.00---2.00-1.003.00--1.001.002.00----------------------1.00-----1.00-------------------------------1.00------1.00----------------------
..................................................................................GAGGCTGATGTGAGTAGAC......................................................19111.0011.00------1.00--1.00---------3.004.00------------1.00---------------1.00----------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTT.................................................24110.0010.00---2.00-1.001.001.00---1.00----------1.00--1.00---------2.00------------------------------------------------------------------
........................................................................................................................AAGACCAGCCTGGGCAACggtg.............22GGTG9.000.00--8.00-1.00-------------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCAt...................................................22T9.008.00-----3.00----1.001.00--1.00--1.002.00-----------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACctt................................................25CTT9.0014.00-6.00-----3.00----------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCA....................................................2118.008.00---1.00-------2.00--1.00---1.00---1.00--1.00----------------------------------------------------------------1.00-----------
.................................................................................GGAGGCTGATGTGAGTAGACC.....................................................2117.007.00-------------5.00------------------------2.00---------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTTtt...............................................26TT6.0010.005.00-------1.00---------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTct................................................25CT6.0020.001.004.00----------------------------------------------1.00-----------------------------------------------------
......................................................................................................................TCAAGACCAGCCTGGGCAACggtg.............24GGTG6.000.00--3.00-3.00-------------------------------------------------------------------------------------------------
..............................................................................TTGGGAGGCTGATGTGAGTAGA.......................................................2225.505.50---1.00-----1.00----0.50---0.50---0.50-------------------------------------------1.00---------------------------0.500.50------
..................................................................................GAGGCTGATGTGAGTAGACCACTc.................................................24C5.0020.00-3.00-----1.00---1.00------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACct.................................................24CT5.0014.00-3.00-----2.00----------------------------------------------------------------------------------------------
..............................................................................................AGTAGACCACTTGAGCCCGGGAG......................................2315.005.00---2.00-2.00----------------------------1.00-------------------------------------------------------------------
...............................................................................TGGGAGGCTGATGTGAGTAGA.......................................................2125.005.00---1.50-0.50--1.500.501.00-------------------------------------------------------------------------------------------
..........................................................................................TGTGAGTAGACCACTTGAGC.............................................2014.004.00--------1.00------------------------------2.00---------------------------------------------1.00----------------
.........................................................................................................................AGACCAGCCTGGGCAACgatg.............21GATG3.500.00--0.50-3.00-------------------------------------------------------------------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCACTTGA...............................................2513.003.00----------1.00----1.00------------------------1.00-------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTctt...............................................26CTT3.0020.001.001.00-----1.00----------------------------------------------------------------------------------------------
.............................................................................................GAGTAGACCACTTGAGCCCGGG........................................2213.003.00------2.00---1.00-------------------------------------------------------------------------------------------
..................................................................................................................GAGTTCAAGACCAGCCTGGGCAACggtg.............28GGTG3.000.00--3.00---------------------------------------------------------------------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCACTTG................................................2413.003.001.00---------------2.00-------------------------------------------------------------------------------------
.............................................................................TTTGGGAGGCTGATGTGAGTAG........................................................2223.003.00---0.50------1.50---------------0.50----------------------------------------------------------------0.50----------
..................................................................................GAGGCTGATGTGAGTAGACCACTTGA...............................................2613.003.001.00--------------1.00---------------------------1.00----------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTTGt...............................................26T3.001.002.00----------------1.00------------------------------------------------------------------------------------
.............................................................................TTTGGGAGGCTGATGTGAGTAGA.......................................................2322.502.50---0.50----0.500.500.500.50------------------------------------------------------------------------------------------
..............................................................................TTGGGAGGCTGATGTGAGTAG........................................................2122.502.50---------1.000.50---------------0.50------------------------------------------------------------------0.50--------
..................................................................................GAGGCTGATGTGAGTAGACCACTTGc...............................................26C2.001.00-2.00----------------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCAat..................................................23AT2.008.00-------------------------------------------------------------1.00---------------------1.00------------------
...................................................................................AGGCTGATGTGAGTAGtt......................................................18TT2.000.00-----1.00---------------------1.00--------------------------------------------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCACTT.................................................2312.002.00-1.00--------------------------------------------------------------------------------1.00-------------------
..................................................................................GAGGCTGATGTGAGTAGACCAa...................................................22A2.008.00---1.00-------1.00------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTctat..............................................27CTAT2.0020.00-2.00----------------------------------------------------------------------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCACTTGt...............................................25T2.003.001.00--1.00--------------------------------------------------------------------------------------------------
......................................................................................................................TCAAGACCAGCCTGGGCAACggcc.............24GGCC2.000.00----2.00-------------------------------------------------------------------------------------------------
..........................................................................................TGTGAGTAGACCACTTGAGCC............................................2112.002.00--------1.00-1.00-------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACtact..................................................23TACT2.0011.002.00-----------------------------------------------------------------------------------------------------
...................................................................................................................AGTTCAAGACCAGCCTGGGCAACgatg.............27GATG2.000.00----2.00-------------------------------------------------------------------------------------------------
.................................................................................GGAGGCTGATGTGAGTAGACCAC...................................................2312.002.00------------------------2.00-----------------------------------------------------------------------------
..............................................................................TTGGGAGGCTGATGTGAGTAGt.......................................................22T2.002.50---------1.50----0.50---------------------------------------------------------------------------------------
......................................................................................CTGATGTGAGTAGACCACTT.................................................2012.002.00-----------------------2.00------------------------------------------------------------------------------
..............................................................................................AGTAGACCACTTGAGCCCGGGAGTT....................................2512.002.00---2.00--------------------------------------------------------------------------------------------------
...................................................................ATCCCAGCACTTTGGGAGGCTGATtaa.............................................................27TAA2.000.00-----------------------------1.00--1.00---------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTa.................................................24A2.0020.00------------------------------------1.00---------1.00-------------------------------------------------------
........................................................................................................................AAGACCAGCCTGGGCAACgac..............21GAC2.000.00--1.00-1.00-------------------------------------------------------------------------------------------------
..........................................................................................TGTGAGTAGACCACTTGAGCCCat.........................................24AT2.002.001.00----------------------------------------1.00------------------------------------------------------------
..................................................AGTGGCTCACACCAGTAATCCCAtt................................................................................25TT2.000.002.00-----------------------------------------------------------------------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCACTTtt...............................................25TT2.002.00-----1.00-------------------------------------------------------------------1.00----------------------------
.............................................................................TTTGGGAGGCTGATGTGAGTAGAC......................................................2412.002.00--------1.00-----------------1.00---------------------------------------------------------------------------
......................................................................................CTGATGTGAGTAGACCACTTtt...............................................22TT2.002.00-----------------------------1.00--1.00---------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCtt...................................................22TT2.0014.00-----------------2.00------------------------------------------------------------------------------------
....................................................................TCCCAGCACTTTGGGAGGCTGATcgc.............................................................26CGC2.000.00----2.00-------------------------------------------------------------------------------------------------
..........................................................................................TGTGAGTAGACCACTTGAGCCC...........................................2212.002.00--------2.00---------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTTaa...............................................26AA2.0010.001.00--1.00--------------------------------------------------------------------------------------------------
...........................................................................ACTTTGGGAGGCTGATGTGAGTAGA.......................................................2521.501.50-----1.50------------------------------------------------------------------------------------------------
................................................................................GGGAGGCTGATGTGAGTAGA.......................................................2021.001.00---------0.50----------------------------------------------------------------------------------0.50---------
..................................................................................GAGGCTGATGTGAGTAGACCACcat................................................25CAT1.0014.00-1.00----------------------------------------------------------------------------------------------------
..........................................................................CACTTTGGGAGGCTGATGTGAGTAt........................................................25T1.000.00-----1.00------------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACc..................................................23C1.0014.00-------1.00----------------------------------------------------------------------------------------------
......................................TTGGCCAGGTGCAGTGGCTCACACCgtc.........................................................................................28GTC1.000.00--1.00---------------------------------------------------------------------------------------------------
...........................................................................................GTGAGTAGACCACTTGAGCCt...........................................21T1.000.00-------------------------------------------------------------------1.00----------------------------------
.............................................................................TTTGGGAGGCTGATGgttc...........................................................19GTTC1.000.00---------------------------------------------------------------------1.00--------------------------------
........................................GGCCAGGTGCAGTGGCTCgagt.............................................................................................22GAGT1.000.00----------------------------------------------------------------------------1.00-------------------------
.........................................................................................................................AGACCAGCCTGGGCAACAcgcg............22CGCG1.000.00--0.50-0.50-------------------------------------------------------------------------------------------------
........................................................................................................................AAGACCAGCCTGGGCAACAgtta............23GTTA1.000.00----1.00-------------------------------------------------------------------------------------------------
..........................................................................CACTTTGGGAGGCTGATGTGAGTAGAC......................................................2711.001.00-----1.00------------------------------------------------------------------------------------------------
...............................................................................TGGGAGGCTGATGTGAGTAGt.......................................................21T1.000.50------0.50----0.50------------------------------------------------------------------------------------------
...............................................................................TGGGAGGCTGATGTGAGTAGACC.....................................................2311.001.00---1.00--------------------------------------------------------------------------------------------------
.................................................................................GGAGGCTGATGTGAGTAGACCACTTt................................................26T1.000.001.00-----------------------------------------------------------------------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCACTaga...............................................25AGA1.001.00--------1.00---------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTTa................................................25A1.0010.001.00-----------------------------------------------------------------------------------------------------
.......................................................................................................................................AACATGGCGAACTCCcccg.19CCCG1.000.00--------------------------------------------------------1.00---------------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCAatt.................................................23ATT1.001.00--------------1.00---------------------------------------------------------------------------------------
.......................................................................................................................CAAGACCAGCCTGGGCAACATGtat...........25TAT1.000.001.00-----------------------------------------------------------------------------------------------------
.................................................................................GGAGGCTGATGTGAGTAGACCAa...................................................23A1.000.00-------------------------------1.00----------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTctc...............................................26CTC1.0020.00-------1.00----------------------------------------------------------------------------------------------
.................................................................................................AGACCACTTGAGCCCGGGAGgcgg..................................24GCGG1.000.00--1.00---------------------------------------------------------------------------------------------------
..........................................................................................TGTGAGTAGACCACTTGAGCCCGGGAG......................................2711.001.00---1.00--------------------------------------------------------------------------------------------------
................................................................................GGGAGGCTGATGTGAGTAtt.......................................................20TT1.000.00---------1.00--------------------------------------------------------------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCACT..................................................2211.001.00----------------------------------------------------1.00-------------------------------------------------
.............................................................................TTTGGGAGGCTGATGTGAGTAGt.......................................................23T1.003.00--------0.500.50--------------------------------------------------------------------------------------------
..................................................................................................................................TGGGCAACATGGCGAACTCCTt...22T1.000.00------------------------------------------1.00-----------------------------------------------------------
.......................................................................................TGATGTGAGTAGACCACT..................................................1821.001.00-------------------------------1.00----------------------------------------------------------------------
.................................................................................GGAGGCTGATGTGAGTAGAat.....................................................21AT1.000.00---1.00--------------------------------------------------------------------------------------------------
...................................................................................AGGCTGATGTGAGTAGAC......................................................1811.001.00--------1.00---------------------------------------------------------------------------------------------
...........................................................................ACTTTGGGAGGCTGATGctgt...........................................................21CTGT1.000.00----1.00-------------------------------------------------------------------------------------------------
..............................................................................................AGTAGACCACTTGAGCCCGGGAGT.....................................2411.001.00---1.00--------------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCccct.................................................24CCCT1.0014.00-------1.00----------------------------------------------------------------------------------------------
..............................................................................TTGGGAGGCTGATGTGAGTAGACCAa...................................................26A1.000.00----------------------1.00-------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACcta................................................25CTA1.0014.00-1.00----------------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTTtttt.............................................28TTTT1.0010.00---1.00--------------------------------------------------------------------------------------------------
...................................................................................................................AGTTCAAGACCAGCCTGGGCAACggtg.............27GGTG1.000.00----1.00-------------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACgt....................................................21GT1.0011.00--------1.00---------------------------------------------------------------------------------------------
...........................................................................................GTGAGTAGACCACTTGAGCCCGG.........................................2311.001.00------1.00-----------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACcttt...............................................26CTTT1.0014.00-------1.00----------------------------------------------------------------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCACTa.................................................23A1.001.00-----1.00------------------------------------------------------------------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCACTcg................................................24CG1.001.00-------1.00----------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTTG................................................2511.001.00----------------1.00-------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTag................................................25AG1.0020.001.00-----------------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACttat..................................................23TTAT1.0011.001.00-----------------------------------------------------------------------------------------------------
..........................................................................................TGTGAGTAGACCACTTGAGCCCGat........................................25AT1.000.00----------1.00-------------------------------------------------------------------------------------------
........................................................................................................................AAGACCAGCCTGGGCAACctac.............22CTAC1.000.00----1.00-------------------------------------------------------------------------------------------------
...............................................................................TGGGAGGCTGATGTGAGTAGACaaa...................................................25AAA1.001.00---1.00--------------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTTc................................................25C1.0010.00-1.00----------------------------------------------------------------------------------------------------
...........................................................................ACTTTGGGAGGCTGATGTGAGTAGttt.....................................................27TTT1.000.50--------------------------------------------1.00---------------------------------------------------------
........................................................................................................................AAGACCAGCCTGGGCAACAcgcg............23CGCG1.000.00----1.00-------------------------------------------------------------------------------------------------
.................................................................................GGAGGCTGATGTGAGagtg.......................................................19AGTG1.000.00-----------------------------------------------------1.00------------------------------------------------
..........................................................................CACTTTGGGAGGCTGATGTGAGTAGt.......................................................26T1.000.00-----1.00------------------------------------------------------------------------------------------------
.........................................................................................ATGTGAGTAGACCACTTGAGCCCGG.........................................2511.001.00------1.00-----------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACt.....................................................20T1.0011.00--------------------------------------------------1.00---------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTat................................................25AT1.0020.00-----1.00------------------------------------------------------------------------------------------------
..................................................................................................................GAGTTCAAGACCAGCCTGGGCAACgcga.............28GCGA1.000.00----------------------------------------------------------1.00-------------------------------------------
......................................................................................................................TCAAGACCAGCCTGGGCAACgac..............23GAC1.000.00----1.00-------------------------------------------------------------------------------------------------
........................................................................................................................AAGACCAGCCTGGGCAACgatg.............22GATG1.000.00----1.00-------------------------------------------------------------------------------------------------
............................................................................CTTTGGGAGGCTGATGTGAGTAGAat.....................................................26AT1.000.00---------------1.00--------------------------------------------------------------------------------------
......................................................................................................................TCAAGACCAGCCTGGcatt..................19CATT1.000.00----------------------------------------------------------------------------------------1.00-------------
...................................................................................AGGCTGATGTGAGTAGACCACTTaa...............................................25AA1.002.00-----------------------------------------1.00------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTcg................................................25CG1.0020.00-------1.00----------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGtttt....................................................21TTTT1.000.00------------------------------1.00-----------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACctaa...............................................26CTAA1.0014.00-1.00----------------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCAta..................................................23TA1.008.00---1.00--------------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACctc................................................25CTC1.0014.00-1.00----------------------------------------------------------------------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCACTTGc...............................................25C1.003.00-1.00----------------------------------------------------------------------------------------------------
.......TCAGAACAGCACACAAcagg................................................................................................................................20CAGG1.000.00----------------------------------------------------------------1.00-------------------------------------
...............................................................................TGGGAGGCTGATGTGAGTAct.......................................................21CT1.000.00---------1.00--------------------------------------------------------------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCACTTGAG..............................................2611.001.00---------------1.00--------------------------------------------------------------------------------------
..........................................................................CACTTTGGGAGGCTGATGTGAGTAGAa......................................................27A1.000.00-----1.00------------------------------------------------------------------------------------------------
...................................................................................AGGCTGATGTGAGTAGACC.....................................................1911.001.00---1.00--------------------------------------------------------------------------------------------------
.................................................................................................................................CTGGGCAACATGGCGAACTCC.....2111.001.00------1.00-----------------------------------------------------------------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCACTTGAat.............................................27AT1.003.00---------------1.00--------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTTct...............................................26CT1.0010.00-1.00----------------------------------------------------------------------------------------------------
.............................................................................TTTGGGAGGCTGATGTGAGTAGACC.....................................................2511.001.00-----------------1.00------------------------------------------------------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCACTTt................................................24T1.002.00----------------1.00-------------------------------------------------------------------------------------
.......................................................................................................CTTGAGCCCGGGAGTaata.................................19AATA1.000.00-----------------------------------------------1.00------------------------------------------------------
...............................................................................TGGGAGGCTGATGTGAGTAGAC......................................................2211.001.00---1.00--------------------------------------------------------------------------------------------------
.................................................................................GGAGGCTGATGTGAGTAGccc.....................................................21CCC1.000.00-------------1.00----------------------------------------------------------------------------------------
...............................................................................TGGGAGGCTGATGTGAGgagt.......................................................21GAGT1.000.00----------1.00-------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTca................................................25CA1.0020.00-------1.00----------------------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTcgag..............................................27CGAG1.0020.00-------1.00----------------------------------------------------------------------------------------------
.....................................................................................................................TTCAAGACCAGCCTGGGttta.................21TTTA1.000.00--------------------------------------------------------------------------1.00---------------------------
....................................................................................................................GTTCAAGACCAGCCTacga....................19ACGA1.000.00---------------------------------------------------------1.00--------------------------------------------
..........................................................................................TGTGAGTAGACCACTTt................................................17T1.000.00---------------------1.00--------------------------------------------------------------------------------
..................................................................................GAGGCTGATGTGAGTAGACCACTTat...............................................26AT1.0010.00---1.00--------------------------------------------------------------------------------------------------
.............................................GGTGCAGTGGCTCACACCtcat........................................................................................22TCAT1.000.00-----------------------------------------------------------------1.00------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCACTcttt..............................................26CTTT1.001.00-1.00----------------------------------------------------------------------------------------------------
...........................................................................ACTTTGGGAGGCTGATGTGAGTAGAC......................................................2611.001.00---1.00--------------------------------------------------------------------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCA....................................................2011.001.00---------1.00--------------------------------------------------------------------------------------------
..............................................................CAGTAATCCCAGCACTTTGGGAGGtct..................................................................27TCT1.000.00--------------------------------------------------------------1.00---------------------------------------
...................................................................................AGGCTGATGTGAGTAGACCACa..................................................22A1.000.00-------------------1.00----------------------------------------------------------------------------------
.......................................................CTCACACCAGTAATCCCAGCACgttt..........................................................................26GTTT1.000.00------------------------------1.00-----------------------------------------------------------------------
...................................................................ATCCCAGCACTTTGGGAGGCgtgg................................................................24GTGG0.670.00--0.67---------------------------------------------------------------------------------------------------
...........................................................................ACTTTGGGAGGCTGATGTGAGTAG........................................................2420.500.50-----0.50------------------------------------------------------------------------------------------------
..............................................................................TTGGGAGGCTGATGTGAGTAGAat.....................................................24AT0.505.50---------------0.50--------------------------------------------------------------------------------------
.........................................................................................................................AGACCAGCCTGGGCAACggga.............21GGGA0.500.00--0.50---------------------------------------------------------------------------------------------------
.........................................................................................................................AGACCAGCCTGGGCAACtgcg.............21TGCG0.500.00----0.50-------------------------------------------------------------------------------------------------
.............................................................................TTTGGGAGGCTGATGTGAGTAGta......................................................24TA0.503.00--------0.50---------------------------------------------------------------------------------------------
.........................................................................................................................AGACCAGCCTGGGCAACggct.............21GGCT0.500.00--0.50---------------------------------------------------------------------------------------------------
............................................................................................TGAGTAGACCACTTGAGC.............................................1820.500.50-------------------------------------------0.50----------------------------------------------------------
...............................................................................TGGGAGGCTGATGTGAGTAGAata....................................................24ATA0.505.00---------0.50--------------------------------------------------------------------------------------------
.............................................................................TTTGGGAGGCTGATGTGAGTAGttt.....................................................25TTT0.503.00-----------------------0.50------------------------------------------------------------------------------
...............................................................................TGGGAGGCTGATGTGAGTAGcaa.....................................................23CAA0.500.50---0.50--------------------------------------------------------------------------------------------------
...............................................................................TGGGAGGCTGATGTGAGTAGAaa.....................................................23AA0.505.00---------0.50--------------------------------------------------------------------------------------------
..................................................................................................................................TGGGCAACATGGCGAACTC......1920.500.50------------------------------------------------------------------------------------------------0.50-----
..............................................................................TTGGGAGGCTGATGTGAGTAGAaaa....................................................25AAA0.505.50---0.50--------------------------------------------------------------------------------------------------
.............................................................................TTTGGGAGGCTGATGTGAGTAGtt......................................................24TT0.503.00---------0.50--------------------------------------------------------------------------------------------
.............................................................................TTTGGGAGGCTGATGTGAGTAGga......................................................24GA0.503.00----------0.50-------------------------------------------------------------------------------------------
...............................................................................TGGGAGGCTGATGTGAGTAG........................................................2020.500.50--------------------------0.50---------------------------------------------------------------------------
.................................................................TAATCCCAGCACTTTtatt.......................................................................19TATT0.330.00-------------------------------------------------------------------------------------------------0.33----
.......................................................................CAGCACTTTGGGAGGCatta................................................................20ATTA0.330.00--------------------------------------------------------------------------------------------------0.33---
....................................................................................................................................GGCAACATGGCGAACTC......1730.330.33--------------------------------------------0.33---------------------------------------------------------
.............................................................................TTTGGGAGGCTGATGTGAGT..........................................................2090.220.22---------------------------------------------------------------------------------------------------0.11-0.11
........................................................................AGCACTTTGGGAGGCTGATGTGAGT..........................................................2570.140.14-----0.14------------------------------------------------------------------------------------------------
............................................AGGTGCAGTGGCTCACACCAGTAATCCCAGC................................................................................3190.110.11----------------------------------------------------------------------------------------------------0.11-
ATGCTACTCAGAACAGCACACAATTTAAAACGTATGAGTTGGCCAGGTGCAGTGGCTCACACCAGTAATCCCAGCACTTTGGGAGGCTGATGTGAGTAGACCACTTGAGCCCGGGAGTTCAAGACCAGCCTGGGCAACATGGCGAACTCCTATCT
..................................................(((((((((((.((((..((((((....)))))).)))).))))))....)))))..................................................
..................................................51....................................................105................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189786SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189787SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		TAX577453(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR029125(GSM416754)
U2OS. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR029129(GSM416758)
SW480. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029131(GSM416760)
MCF7. (cell line)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343334SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR037936(GSM510474)
293cand1. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR139195(SRX050645)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR139216(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR139208(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR139198(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR139214(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR191484(GSM715594)
12genomic small RNA (size selected RNA from t. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR139192(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR139211(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191539(GSM715649)
61genomic small RNA (size selected RNA from t. (breast)		SRR038863(GSM458546)
MM603. (cell line)		SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)		SRR038862(GSM458545)
MM472. (cell line)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR139210(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		SRR191532(GSM715642)
135genomic small RNA (size selected RNA from . (breast)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR040028(GSM532913)
G026N. (cervix)		SRR191468(GSM715578)
116genomic small RNA (size selected RNA from . (breast)		SRR040023(GSM532908)
G575T. (cervix)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189785SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR029130(GSM416759)
DLD2. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
.............................................................................................................gcacGGAGTTCAAGACCAGCCTGGGCAA.................. 28gcac2.000.00--2.00---------------------------------------------------------------------------------------------------
....................catgTTAAAACGTATGAGT.................................................................................................................... 19catg2.000.00---------------------------------------------1.00-------------------------------1.00------------------------
.....................................................agaTCACACCAGTAATCCCA.................................................................................. 20aga1.000.00---------------------------------------------------------------------------1.00--------------------------
..........................................................ttaaCAGTAATCCCAGCACTTT........................................................................... 22ttaa1.000.00------------------------------------------1.00-----------------------------------------------------------
...........................................................gtggAGTAATCCCAGCACTTTGGGA....................................................................... 25gtgg1.000.00------------------------------------------------------------1.00-----------------------------------------
.............................................................................................................gtccGGAGTTCAAGACCAGCCTGGGCAACAT............... 31gtcc1.000.00--1.00---------------------------------------------------------------------------------------------------
...........................................................................................................................ccacGCCTGGGCAACATGGCGA.......... 22ccac1.000.00----1.00-------------------------------------------------------------------------------------------------
......................................................................................................gccTGAGCCCGGGAGTTCAAGACCAG........................... 26gcc1.000.00----1.00-------------------------------------------------------------------------------------------------
..........................................................................................................tcgtCCGGGAGTTCAAGACCAGCCTGGGCA................... 30tcgt1.000.00--1.00---------------------------------------------------------------------------------------------------
.............................................................................................................cgtcGGAGTTCAAGACCAGCCT........................ 22cgtc1.000.00----1.00-------------------------------------------------------------------------------------------------
.............................................................................................................................gacCCTGGGCAACATGGCGAA......... 21gac1.000.00--1.00---------------------------------------------------------------------------------------------------
...................................................................................................................acggCAAGACCAGCCTGGGCAACA................ 24acgg1.000.00---------------------------------------------------------------------------------1.00--------------------
.............................................................................................................gatcGGAGTTCAAGACCAGCCTGGGCAA.................. 28gatc1.000.00--1.00---------------------------------------------------------------------------------------------------
..................................cggGTTGGCCAGGTGCAGTGGCT.................................................................................................. 23cgg1.000.00--1.00---------------------------------------------------------------------------------------------------
...............................................................................................tagGACCACTTGAGCCCGGGAGTT.................................... 24tag1.000.00----1.00-------------------------------------------------------------------------------------------------
....................................cgccGGCCAGGTGCAGTGGCTCACA.............................................................................................. 25cgcc1.000.00--1.00---------------------------------------------------------------------------------------------------
...............................................................................................tgtGACCACTTGAGCCCGGGAGTT.................................... 24tgt1.000.00----1.00-------------------------------------------------------------------------------------------------
............................................................................................................tatCGGGAGTTCAAGACCAGCCT........................ 23tat1.000.00-------------------------------------------------------1.00----------------------------------------------
......................................................................................................gacTGAGCCCGGGAGTTCAAGACCAGCCT........................ 29gac1.000.00--1.00---------------------------------------------------------------------------------------------------
...........................................................gtggAGTAATCCCAGCACTTTGG......................................................................... 23gtgg1.000.00-----------------------------------------------------------------------1.00------------------------------
.......................................................................ggggACTTTGGGAGGCTGATG............................................................... 21gggg1.000.00--------------------------------------------------------------------------------1.00---------------------
..................................................................................................................tccaTCAAGACCAGCCTGGGC.................... 21tcca1.000.00------------------------1.00-----------------------------------------------------------------------------
...........................................................gtggAGTAATCCCAGCACTTTGGGAGGC.................................................................... 28gtgg1.000.00-----------------------------------------------------------------------------------------1.00------------
.................................................................................................................ctcGTTCAAGACCAGCCTGGG..................... 21ctc1.000.00--------------------------------------------------------------------------------------1.00---------------
...........................................................................................................ttgCCGGGAGTTCAAGACCAGCCT........................ 24ttg1.000.00--------------------------------------------------------------------1.00---------------------------------
............................................................................................................ttCCGGGAGTTCAAGACCAGCCT........................ 23tt1.000.00----------1.00-------------------------------------------------------------------------------------------
.......................................................................................................................caccACCAGCCTGGGCAACATGGC............ 24cacc1.000.00----1.00-------------------------------------------------------------------------------------------------
..........................................................................................................gacgCCGGGAGTTCAAGACCAGCCTGGG..................... 28gacg1.000.00--1.00---------------------------------------------------------------------------------------------------
.................................ggccGTTGGCCAGGTGCAGTGGCTCA................................................................................................ 26ggcc1.000.00--1.00---------------------------------------------------------------------------------------------------
.............................................................................................................atttGGAGTTCAAGACCAGCCTGGG..................... 25attt1.000.00---------------------------------------------------------------1.00--------------------------------------
............................................................................................................ggcgGGGAGTTCAAGACCAGCCTGGGCAA.................. 29ggcg1.000.00--1.00---------------------------------------------------------------------------------------------------
..........agctAGCACACAATTTAAA.............................................................................................................................. 19agct1.000.00------1.00-----------------------------------------------------------------------------------------------
......................................................................................................................cgggGACCAGCCTGGGCAA.................. 19cggg0.500.00----0.50-------------------------------------------------------------------------------------------------