ID: hsa-mir-3680
chr16:29610450-29610636 -
Display Libraries
(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(6)
B-CELL 		(3)
BRAIN 		(16)
BREAST 		(51)
CELL-LINE 		(3)
CERVIX 		(4)
FIBROBLAST 		(7)
HEART 		(5)
HELA 		(3)
LIVER 		(1)
LUNG 		(1)
OTHER 		(2)
PLACENTA 		(1)
RRP40.ip 		(30)
SKIN 		(2)
SPLEEN 		(1)
TESTES 		(2)
THYMUS 		(2)
UTERUS 		(1)
XRN.ip
Showing top 117 reads
CAATTCTCCTGCCCCAGCTTCCTGAGTAGCTGGGATTACAGTACAGCCTCAAATTTAAGGAGGGACTCACTCACAGGATTGTGCAAATGCAAAGTTGGCTTTTGCATGACCCTGGGAGTAGGTGCCTCCTTAAATTTTGCACCCTCAGCAACTCCATCCCCTGTCACTTTGCTAGTCCCAACCCTGA
.....................................................((.((..((((.((((.(((((((((.((.......)).))))))))).)))).))))..)).))..................................................
..........................................................59.................................................................126...........................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189787SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189786SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR189782SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR139164(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR038859(GSM458542)
MM386. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR189785SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR029127(GSM416756)
A549. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038860(GSM458543)
MM426. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		TAX577740(Rovira)
total RNA. (breast)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR139215(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR139200(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR038854(GSM458537)
MM653. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR029126(GSM416755)
143B. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359192(GSM359192)
HepG2_3pM_6. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040042(GSM532927)
G428N. (cervix)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR139214(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR139187(SRX050640)
FLASHPage purified small RNA (~15-40nt) from . (lung)		TAX577590(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR139210(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		SRR191532(GSM715642)
135genomic small RNA (size selected RNA from . (breast)		SRR029124(GSM416753)
HeLa. (hela)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139202(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)		GSM359187(GSM359187)
HepG2_2pM_1. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		SRR037938(GSM510476)
293Red. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR139204(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)
...............................................................GACTCACTCACAGGATTGTGC.......................................................................................................21268.0068.0012.00-5.00-6.004.00-3.001.008.004.00-4.001.001.00---2.00---1.001.00--------------1.00---------2.00----2.00------1.00--1.00-1.00------1.00----------------1.001.00-----------1.00-----1.00--------1.00----1.00---------------------
...............................................................GACTCACTCACAGGATTGTGCA......................................................................................................22242.0042.00-2.002.001.001.001.00--3.00----1.00-1.00-3.00-----1.00---2.002.00-----1.00-----1.00----1.00---1.002.00-2.00-1.00--2.00-2.00-2.00--1.00-----1.00-------------1.00---------------------1.00-----------------1.001.001.00-----------------
....................................................................................................TTTGCATGACCCTGGGAGTAGG.................................................................22325.3325.332.670.671.330.671.330.672.002.670.67-----4.00-----------0.67-1.331.33------------0.670.67-1.33---------------------1.33-0.670.67-------------------------------------------------------------------------
................................................................ACTCACTCACAGGATTGTGCA......................................................................................................21224.0024.004.004.00--2.001.00-1.00--1.00------2.00------1.00-1.00----2.00-----1.00----------------------------1.00------------------------------------1.001.00-----------1.00---------------------------
..................................................................TCACTCACAGGATTGTGCAAAT...................................................................................................22224.0024.003.001.00-----2.00---1.001.00--2.00---1.00--2.00---------3.00-1.00--1.00---1.00----------------------1.00----1.00-----------------------------1.00-------------1.00-1.00----------------------------
................................................................ACTCACTCACAGGATTGTGC.......................................................................................................20216.0016.00--3.00-3.001.00-1.001.00-1.00-1.00-----1.00---------------1.00-------------------------1.00--1.00-----------------------------------------------1.00--------------------------------
................................................................ACTCACTCACAGGATTGTG........................................................................................................19216.0016.00------12.00-----1.00---------------------------------------------2.00--------------------------------------------------------------1.00----------------------
...............................................................GACTCACTCACAGGATTGTG........................................................................................................20215.0015.00--1.00--1.00-2.001.00-------1.00------1.00--1.00--------------------------------------------1.00--1.00------1.001.00----1.00---1.001.00---------------------------------------------------
................................................................ACTCACTCACAGGATTGTGCAA.....................................................................................................22212.0012.00-2.00-3.00--------------1.00---1.00----------------------------------------------------------------------1.001.00--------------1.001.00-----------------1.00---------------
...................................................................CACTCACAGGATTGTGCAAATG..................................................................................................2228.008.00--2.00--1.00-----------------1.00------------2.00------------1.00-----------------------1.00----------------------------------------------------------------------
...................................................................CACTCACAGGATTGTGCAAATGC.................................................................................................2328.008.00----1.00-------1.00------1.00-----------1.00--------------1.00---------1.00--------------------------1.00---------------------------------------1.00--------------------
...................................................................................................TTTTGCATGACCCTGGGAGTAGG.................................................................2336.676.67--2.000.67---2.00--------------------------------0.67--0.67------------------------------------------------------------------------------------------0.67---------
......................................................................................................TGCATGACCCTGGGAGTAGGTGC..............................................................2336.676.670.670.671.33---------------------0.67----2.00-------------------------------------0.670.67---------------------------------------------------------------------------
....................................................................................................TTTGCATGACCCTGGGAGTAG..................................................................2136.006.002.00------------------1.33----------------------------------------------------0.67-0.67---0.67------------------------------------------------------0.67----------
....................................................................................................TTTGCATGACCCTGGGAGTAGGa................................................................23A6.0025.334.00--0.67----0.67--------------------------------------------------------------------------------------------------------------------------------0.67------
.....................................................................................................TTGCATGACCCTGGGAGTAGGT................................................................2236.006.000.67----0.67------------------2.00----------------------------------------------------0.67-1.33------------------------------------------------------------0.67---
....................................................................................................TTTGCATGACCCTGGGAGcagg.................................................................22CAGG5.000.00-4.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................TTTGCATGACCCTGGGAGTAGGT................................................................2334.674.672.67------0.67---------------------------------------------------------------------0.67---------------------------------------------------0.67--------------
......................................................................................................TGCATGACCCTGGGAGTAGG.................................................................2034.674.67-------------------0.674.00---------------------------------------------------------------------------------------------------------------------------
..................................................................TCACTCACAGGATTGTGCAAATGC.................................................................................................2424.004.00--1.00-------1.00--1.00----------------------------------------------------------------------------------1.00-----------------------------------------------
................................................................ACTCACTCACAGGATTGTGCAAA....................................................................................................2324.004.00-1.00-------------1.00---------------------------1.00----------------------------------------------------------------------1.00-----------------------------
......................................................................................................TGCATGACCCTGGGAGTAG..................................................................1934.004.00--------0.67--2.67-------------------------------------------------------------------------------------------------------------------------------0.67----
...................................................................CACTCACAGGATTGTGCAAAcgc.................................................................................................23CGC4.000.00-1.00-3.00--------------------------------------------------------------------------------------------------------------------------------------------
....................................................................ACTCACAGGATTGTGCAAATGC.................................................................................................2234.004.00--2.00-----------------------0.67-------------------1.33-------------------------------------------------------------------------------------------------
......................................................................................................TGCATGACCCTGGGAGTAGGTG...............................................................2234.004.00-----0.67----0.670.67------0.67---------------------------------------------------------------------------------------------------------------0.67-0.67-----------
.....................................................................................................TTGCATGACCCTGGGAGTAGG.................................................................2133.333.33-----0.67--------0.67----------0.67----------------0.67----------------------------0.67------------------------------------------------------------------------
...................................................................................................TTTTGCATGACCCTGGGAGcagg.................................................................23CAGG3.330.67-0.67-2.67--------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGCATGACCCTGGGAGTAGGcgc..............................................................23CGC3.334.67-2.00-1.33--------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................TTGTGCAAATGCAAAactg..........................................................................................19ACTG3.000.00-----------2.00------------------1.00-----------------------------------------------------------------------------------------------------------------
...............................................................GACTCACTCACAGGATTGTGtt......................................................................................................22TT3.0015.003.00-----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................TCACTCACAGGATTGTGCAAA....................................................................................................2123.003.00-----------------------------------1.00------1.00--------------------------------1.00--------------------------------------------------------------------
..............................................................GGACTCACTCACAGGATTGTGCA......................................................................................................2323.003.00---------------1.00-------------------1.00------------------------------------------------------------------------------------1.00-----------------------
....................................................................................................TTTGCATGACCCTGGGAGTggga................................................................23GGGA2.671.332.00---------------------------------------------------------------------------0.67-------------------------------------------------------------------
...............................................................GACTCACTCACAGGATTGTGCAt.....................................................................................................23T2.0042.00---------------------2.00--------------------------------------------------------------------------------------------------------------------------
............................GCTGGGATTACAGTAtgt.............................................................................................................................................18TGT2.000.00---------------------2.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................TTTTGCATGACCCTGGGAGTAGa.................................................................23A2.001.33--2.00---------------------------------------------------------------------------------------------------------------------------------------------
.................................................................CTCACTCACAGGATTGTGCA......................................................................................................2022.002.00-----1.00-----------------------------------------------------------------------------------------------------------------1.00------------------------
..ATTCTCCTGCCCCAGCcctg.....................................................................................................................................................................20CCTG2.000.00---------------------------------2.00--------------------------------------------------------------------------------------------------------------
..........................................................GGAGGGACTCACTCACAGGA.............................................................................................................2022.002.00-------------2.00----------------------------------------------------------------------------------------------------------------------------------
.................................................................CTCACTCACAGGATTGTGCAA.....................................................................................................2122.002.00--------1.00--------------------------------------------------------------------------------------1.00------------------------------------------------
...................................................................................................TTTTGCATGACCCTGGGAGT....................................................................2032.002.00---------2.00--------------------------------------------------------------------------------------------------------------------------------------
...................................................................CACTCACAGGATTGTGCAAAT...................................................................................................2122.002.00----------1.00-----------------------------------------------------------------------------------------1.00-------------------------------------------
......................................................................................................TGCATGACCCTGGGAGcag..................................................................19CAG2.000.00---------------------------------------2.00--------------------------------------------------------------------------------------------------------
......................................................................................................TGCATGACCCTGGGAGTAGGT................................................................2132.002.00--------0.67--------------------------------0.67-----------------------------------------------------------------------------------------------------0.67
...................................................................................................TTTTGCATGACCCTGGGAGTAG..................................................................2231.331.33---0.67-----------------------------------0.67--------------------------------------------------------------------------------------------------------
......................................................................................................TGCATGACCCTGGGAGTAGGTGa..............................................................23A1.334.00---------------------------1.33--------------------------------------------------------------------------------------------------------------------
....................................................................................................TTTGCATGACCCTGGGAGT....................................................................1931.331.33--------------------------------------------1.33---------------------------------------------------------------------------------------------------
.....................................................................................................TTGCATGACCCTGGGAGTAG..................................................................2031.331.33-0.67---------0.67------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................TTTGCATGACCCTGGGAGTAGGc................................................................23C1.3325.33---1.33--------------------------------------------------------------------------------------------------------------------------------------------
....................................................................ACTCACAGGATTGTGCAAATGa.................................................................................................22A1.330.67-----------------------------------------------------------------------------------------------------------------------------------0.67------0.67-----
......................................................................................................TGCATGACCCTGGGAGTAGGTGCt.............................................................24T1.336.67---1.33--------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GACTCACTCACAGGATTGTGCAAc....................................................................................................24C1.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------
................................................................ACTCACTCACAGGATTGTGtgg.....................................................................................................22TGG1.0016.00---------------------------------------------------1.00--------------------------------------------------------------------------------------------
...............................................................GACTCACTCACAGGATTGggc.......................................................................................................21GGC1.000.00-----1.00------------------------------------------------------------------------------------------------------------------------------------------
............................GCTGGGATTACAGTAtgtt............................................................................................................................................19TGTT1.000.00-----------------------------------------------1.00------------------------------------------------------------------------------------------------
...............................................................GACTCACTCACAGGATTGcgca......................................................................................................22CGCA1.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------
..ATTCTCCTGCCCCAGCacct.....................................................................................................................................................................20ACCT1.000.00---------------------------------1.00--------------------------------------------------------------------------------------------------------------
...................................................................................................TTTTGCATGACCCTGGGAGTAt..................................................................22T1.000.00----------------------------------------------------------------------------------------1.00-------------------------------------------------------
...................................................................CACTCACAGGATTGTGCAAATGCAAAa.............................................................................................27A1.000.00--------------------------------------------------------------------1.00---------------------------------------------------------------------------
..................................................................TCACTCACAGGATTGTGCAAATGt.................................................................................................24T1.001.00-------------------------------------------------------------------------------------------------------------------------------1.00----------------
........................................................AAGGAGGGACTCACTCACAGGAT............................................................................................................2321.001.00-----1.00------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GACTCACTCACAGGATTGTGCAA.....................................................................................................2321.001.00--------------------------------------------------------1.00---------------------------------------------------------------------------------------
..................................................................TCACTCACAGGATTGTGCAAATaa.................................................................................................24AA1.0024.00-------------------------------------1.00----------------------------------------------------------------------------------------------------------
...............................................................................TGTGCAAATGCAAAGctga.........................................................................................19CTGA1.000.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------
......................TGAGTAGCTGGGATTACAGTttg..............................................................................................................................................23TTG1.000.00-----------------------------------------------------------------------------------------------------1.00------------------------------------------
..............................................................GGACTCACTCACAGGATTGTG........................................................................................................2121.001.00-------------1.00----------------------------------------------------------------------------------------------------------------------------------
....................................................................................................TTTGCATGACCCTGGGAGTAtga................................................................23TGA1.000.001.00-----------------------------------------------------------------------------------------------------------------------------------------------
.............................CTGGGATTACAGTACgac............................................................................................................................................18GAC1.000.00--------------------------------------------------------------------------------------------------1.00---------------------------------------------
..................................................................TCACTCACAGGATTGTGCAAAcgc.................................................................................................24CGC1.003.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................TCACCTGTCACTTTGCactg...........20ACTG1.000.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GACTCACTCACAGGATTGT.........................................................................................................1921.001.00--------------------------------------------1.00---------------------------------------------------------------------------------------------------
................................................................ACTCACTCACAGGATTGcgca......................................................................................................21CGCA1.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GACTCACTCACAGGATTGTtca......................................................................................................22TCA1.001.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------
..........................TAGCTGGGATTACAGTACgc.............................................................................................................................................20GC1.000.00---------------------------------------------------------------------------------------------------------1.00--------------------------------------
..................................................................TCACTCACAGGATTGTGCAAATG..................................................................................................2321.001.00------------------------------------------------------------------1.00-----------------------------------------------------------------------------
....................................................................ACTCACAGGATTGTGCAAATa..................................................................................................21A1.000.00-------------------------------------------------------------------------------------1.00----------------------------------------------------------
......................................................................................................TGCATGACCCTGGGAGTgggt................................................................21GGGT1.000.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------
............................GCTGGGATTACAGTAtgtg............................................................................................................................................19TGTG1.000.00-----------------------------------------------1.00------------------------------------------------------------------------------------------------
..................................................................TCACTCACAGGATTGTGCAA.....................................................................................................2021.001.00--------------------------------------------------------------------------------1.00---------------------------------------------------------------
...................................................................CACTCACAGGATTGTGCAAATGt.................................................................................................23T1.008.00------------------------------------------------------1.00-----------------------------------------------------------------------------------------
......................................................................TCACAGGATTGTGCAAATGCAtt..............................................................................................23TT1.000.00----------------------------------------------------------------------------------------------------------------------1.00-------------------------
...............................................................GACTCACTCACAGGATTGTGCca.....................................................................................................23CA1.0068.00---------------------------------------------------1.00--------------------------------------------------------------------------------------------
......................................................................................................TGCATGACCCTGGGAGTtg..................................................................19TG1.000.00-----------1.00------------------------------------------------------------------------------------------------------------------------------------
...........................................................GAGGGACTCACTCACAGGA.............................................................................................................1921.001.00-----1.00------------------------------------------------------------------------------------------------------------------------------------------
...................................................................CACTCACAGGATTGTGCAAAcg..................................................................................................22CG1.000.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------
...................................................................CACTCACAGGATTGTGCAAAggc.................................................................................................23GGC1.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................TCACTCACAGGATTGTGCAAATt..................................................................................................23T1.0024.00----------------------------------------1.00-------------------------------------------------------------------------------------------------------
................................................................ACTCACTCACAGGATTGTGCAt.....................................................................................................22T1.0024.00------------------------------------1.00-----------------------------------------------------------------------------------------------------------
...................................................................CACTCACAGGATTGTGCAAgtgc.................................................................................................23GTGC1.000.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------
..........................TAGCTGGGATTACAGTAagc.............................................................................................................................................20AGC1.000.00--------------------------------------------------------------1.00---------------------------------------------------------------------------------
...............................................................GACTCACTCACAGGATTGcaca......................................................................................................22CACA1.000.00-------------------------------------------------------1.00----------------------------------------------------------------------------------------
...................................................................................................TTTTGCATGACCCTGGGAGTAGGc................................................................24C0.676.67-0.67----------------------------------------------------------------------------------------------------------------------------------------------
......................TGAGTAGCTGGGATTgaat..................................................................................................................................................19GAAT0.670.00------------------------------------------------------------------------------0.67-----------------------------------------------------------------
....................................................................................................TTTGCATGACCCTGGGAGTggg.................................................................22GGG0.671.33------0.67-----------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGCATGACCCTGGGAGTAGGTGt..............................................................23T0.674.00-------------------------------------------------------------------------0.67----------------------------------------------------------------------
.....................CTGAGTAGCTGGGATTAattc.................................................................................................................................................21ATTC0.670.00---------------------------------------------------------------------------------------------------------------------------------------------0.67--
..................................................................TCACTCACAGGATTGTGC.......................................................................................................1830.670.67----------------------------------------------------------------------------------------------------------------------------------------0.67-------
...................................................................................................TTTTGCATGACCCTGGGAG.....................................................................1930.670.67-0.67----------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TTGCATGACCCTGGGAGTAGGcg...............................................................23CG0.673.33---0.67--------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................ATGACCCTGGGAGTAGGTGC..............................................................2030.670.670.67-----------------------------------------------------------------------------------------------------------------------------------------------
.....................CTGAGTAGCTGGGATgcct...................................................................................................................................................19GCCT0.670.00---------------------------------------------------------------------------0.67--------------------------------------------------------------------
....................................................................................................TTTGCATGACCCTGGGAGTAGGTtaaa............................................................27TAAA0.674.67-----------0.67------------------------------------------------------------------------------------------------------------------------------------
....................................................................ACTCACAGGATTGTGCAAATG..................................................................................................2130.670.67----------------------------------------------------------------------------------------------------------------------------------------------0.67-
.........................................................................................................ATGACCCTGGGAGTAGG.................................................................1740.500.500.50-----------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................CCCTGGGAGTAGGTGC..............................................................1640.500.500.50-----------------------------------------------------------------------------------------------------------------------------------------------
CAATTCTCCTGCCCCAGCTTCCTGAGTAGCTGGGATTACAGTACAGCCTCAAATTTAAGGAGGGACTCACTCACAGGATTGTGCAAATGCAAAGTTGGCTTTTGCATGACCCTGGGAGTAGGTGCCTCCTTAAATTTTGCACCCTCAGCAACTCCATCCCCTGTCACTTTGCTAGTCCCAACCCTGA
.....................................................((.((..((((.((((.(((((((((.((.......)).))))))))).)))).))))..)).))..................................................
..........................................................59.................................................................126...........................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189787SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189786SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR189782SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR139164(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR038859(GSM458542)
MM386. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR189785SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR029127(GSM416756)
A549. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038860(GSM458543)
MM426. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		TAX577740(Rovira)
total RNA. (breast)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR139215(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR139200(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR038854(GSM458537)
MM653. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR029126(GSM416755)
143B. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359192(GSM359192)
HepG2_3pM_6. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040042(GSM532927)
G428N. (cervix)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR139214(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR139187(SRX050640)
FLASHPage purified small RNA (~15-40nt) from . (lung)		TAX577590(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR139210(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		SRR191532(GSM715642)
135genomic small RNA (size selected RNA from . (breast)		SRR029124(GSM416753)
HeLa. (hela)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR139202(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)		GSM359187(GSM359187)
HepG2_2pM_1. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		SRR037938(GSM510476)
293Red. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR139204(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)
cagAATTCTCCTGCCCCAG.......................................................................................................................................................................... 19cag7.000.00----------------3.00--------1.00------------2.00-------------------------------------------------------------------------1.00-------------------------------
cagAATTCTCCTGCCCCA........................................................................................................................................................................... 18cag3.000.00----------------1.00--------2.00----------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................gcacCACCTGTCACTTTGC............... 19gcac2.000.00------------------------------2.00-----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................taAACTCCATCACCTGT....................... 17ta1.000.00-----------------------------------------------------------------------------------------------------------1.00------------------------------------
......................................................................................................................................................catgCATCACCTGTCACTTT................. 20catg1.000.00-----------------------------------1.00------------------------------------------------------------------------------------------------------------
....................................................................aaTCACAGGATTGTGCAAAT................................................................................................... 20aa1.000.00-------------------------------------------------------------------------------------------------1.00----------------------------------------------
cgacTCTCCTGCCCCAGCTTCCT.................................................................................................................................................................... 23cgac1.000.00--------------------------------------------------------------1.00---------------------------------------------------------------------------------
...............................................................taaaCACTCACAGGATTGT......................................................................................................... 19taaa1.000.00-----------------------------------------1.00------------------------------------------------------------------------------------------------------
..................aacgTGAGTAGCTGGGATTACAG.................................................................................................................................................. 23aacg1.000.00-----------------------------------------------------------------1.00------------------------------------------------------------------------------
tggaTCTCCTGCCCCAGCT........................................................................................................................................................................ 19tgga1.000.00--------------------------------------------------------------------------------------1.00---------------------------------------------------------
........................................................................................GCAAAGTTGGCTTTTGCATGACCCTGGGAGTAG.................................................................. 3330.670.67---------------------------------------------------------------------------------------------------------------------------------------0.67--------