ID: hsa-mir-3657
chr12:112475353-112475569 -
Display Libraries
(1)
AGO2.ip 		(3)
B-CELL 		(26)
BREAST 		(35)
CELL-LINE 		(8)
CERVIX 		(2)
FIBROBLAST 		(5)
HEART 		(3)
HELA 		(2)
KIDNEY 		(7)
LIVER 		(2)
LUNG 		(1)
OTHER 		(1)
OVARY 		(3)
PLACENTA 		(1)
RRP40.ip 		(12)
SKIN 		(2)
SPLEEN 		(3)
TESTES 		(3)
THYMUS 		(1)
UTERUS 		(1)
XRN.ip
Showing top 103 reads
TAGACATGTTGTCCTTTTTAGTGAGTTAAATCAGGAGTCACTAATGTTGTTGTGTCCCATAATTAAATAATGAAATCTGAAATCACCAATAATGGGACACTAATGTGATTAATGTTGTTGTGTCCCATTATTGGTGATTTCAGATTTCATATATGATTAAGGACATATCTACCAGATTTCTTTATAAAGGTGCCTTTTTCCCTCTGTAATAAGTAAG
..................................................((((((((((((((((((((((((((((((.....))))))..))))))))))))))))))))))))..................................................
............................................................................77................................................................143........................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR037937(GSM510475)
293cand2. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR189786SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR029127(GSM416756)
A549. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR189787SRR029130(GSM416759)
DLD2. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR040028(GSM532913)
G026N. (cervix)		SRR189785SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR139215(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR040010(GSM532895)
G529N. (cervix)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR189783SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR139204(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSE20417(GSM514985)
Colon and lung cancer pool. 		TAX577739(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR139180(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139217(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR139183(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR139202(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)		SRR139176(SRX050650)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR139167(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR139216(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR139208(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		SRR191465(GSM715575)
113genomic small RNA (size selected RNA from . (breast)		SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)		SRR040036(GSM532921)
G243N. (cervix)		SRR139200(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR191467(GSM715577)
115genomic small RNA (size selected RNA from . (breast)		SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR139178(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR029128(GSM416757)
H520. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR139164(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR139177(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR040039(GSM532924)
G531T. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR040022(GSM532907)
G575N. (cervix)		SRR139187(SRX050640)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR139211(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR139179(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR191619(GSM715729)
166genomic small RNA (size selected RNA from . (breast)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR139193(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		TAX577743(Rovira)
total RNA. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR139210(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		SRR040015(GSM532900)
G623T. (cervix)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR139199(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR139174(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
.....................................................................................................................TTGTGTCCCATTATTGGTGATT..............................................................................221285.00285.001.00-24.0041.0022.0022.0011.008.0019.007.0026.0013.0016.0010.005.008.006.008.004.001.005.002.003.001.001.00----1.001.00--2.00-1.001.00-1.002.001.001.00-----------1.00---1.00--------1.00---1.00-------------1.00-------------1.00--1.00------1.001.00---1.00------------
.................................................................................ATCACCAATAATGGGACACTA...................................................................................................................211219.00219.00104.0051.0015.005.002.00-4.006.00-12.00-1.00---5.00---3.00------3.003.00----3.00-----1.00----------------------1.00----------------------------------------------------------------
......................................................................................................................TGTGTCCCATTATTGGTGATT..............................................................................211136.00136.001.00-8.002.0014.0019.002.0018.006.0011.00-3.003.006.002.001.003.003.004.00--3.00--1.001.00-------1.00--1.00-----1.001.00--2.002.002.002.00-----1.00---1.001.00-----------1.001.00---1.00-1.00--1.00------1.00---------1.00-----1.00-----1.00----1.00---------
......................................................................................................................TGTGTCCCATTATTGGTGATTT.............................................................................22154.0054.001.00-3.002.004.004.00--4.00----2.009.00-2.00-1.00-1.001.002.001.00-1.00---2.001.003.00--3.00---------1.00-----------------1.00-----------------1.00--1.00---------1.00-1.001.00-----------------------------
.................................................................................ATCACCAATAATGGGACACTAA..................................................................................................................22147.0047.0028.006.00--1.00-3.00----5.00------1.00--1.00--------------1.00-----1.00-----------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACACTAt..................................................................................................................22T21.00219.003.00--1.003.00-3.00---------------------3.00----------------------1.00-----------1.00-1.00-----1.00---------1.00---1.00-----------1.00------1.00---------------------
......................................................................................................................TGTGTCCCATTATTGGTGATTTa............................................................................23A20.0054.002.00-----1.003.005.00--1.001.00---2.00---2.00--2.00-------------------1.00----------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACACT....................................................................................................................20119.0019.005.00-2.00-2.00-------------1.001.001.001.00-----------------------------------------------1.00------1.00-1.00---------------1.00--------------------1.00--1.00-------
....................................................................................ACCAATAATGGGACACTA...................................................................................................................18113.0013.00-6.00----6.00----------------------------------1.00------------------------------------------------------------------------------------
..................................................................................TCACCAATAATGGGACACTAAT.................................................................................................................2218.008.00--6.00--------------1.00--------1.00---------------------------------------------------------------------------------------------------
...............................................................................AAATCACCAATAATGGGACACT....................................................................................................................2215.005.00--3.00---2.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTGTGTCCCATTATTGGTGATa..............................................................................22A5.002.00---5.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACACTAAcg................................................................................................................24CG4.0047.00-4.00----------------------------------------------------------------------------------------------------------------------------
....................................................................................ACCAATAATGGGACACTAA..................................................................................................................1914.004.002.00-----2.00-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................TGTGTCCCATTATTGGTGATTc.............................................................................22C3.00136.00-2.00-----------------------1.00----------------------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACACTAAa.................................................................................................................23A3.0047.00-------------------------------------1.00------------2.00---------------------------------------------------------------------------
..................................................................................TCACCAATAATGGGACACTAATGT...............................................................................................................2413.003.00------1.00----------------2.00------------------------------------------------------------------------------------------------------
......................................................................................................................TGTGTCCCATTATTGGTGATct.............................................................................22CT2.501.50-1.50----1.00-----------------------------------------------------------------------------------------------------------------------
..................................................................................TCACCAATAATGGGACACTA...................................................................................................................2012.002.001.00------------------1.00----------------------------------------------------------------------------------------------------------
.......................................................................................................................GTGTCCCATTATTGGTGATT..............................................................................2022.002.00--1.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACACTta..................................................................................................................22TA2.0019.00------------------------------------------------------1.00-------------------------------1.00---------------------------------------
............................................................................................................................................CAGATTTCATATATGATTAAGGACATA..................................................2712.002.00------------------------2.00-----------------------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACACTAc..................................................................................................................22C2.00219.00-------------------1.00------------------------------------------------------------------------1.00---------------------------------
.....................................................................................................................TTGTGTCCCATTATTGGTGAT...............................................................................2112.002.00----1.00--------1.00----------------------------------------------------------------------------------------------------------------
...........................................................................TCTGAAATCACCAATAATGGGAC.......................................................................................................................2322.002.00-----------------------------------1.00------------------------------------------------------------------------------------------
................................................................................AATCACCAATAATGGGACACTA...................................................................................................................2212.002.001.001.00----------------------------------------------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACACTAAT.................................................................................................................2312.002.001.00------------------1.00----------------------------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACACTt...................................................................................................................21T2.0019.00----------------------------------------------------------------------------------------------------1.00----------------1.00--------
.................................................................................ATCACCAATAATGGGACAC.....................................................................................................................1932.002.00----------------------------------------------------0.33------------------------------------------------------------------0.330.33-----
......................................................................................................................TGTGTCCCATTATTGGTGActta............................................................................23CTTA1.501.00-0.50----0.50------------0.50----------------------------------------------------------------------------------------------------------
......................................................................................................................TGTGTCCCATTATTGGTGAT...............................................................................2021.501.50--------------------1.00-0.50-------------------------------------------------------------------------------------------------------
......................................................................................................................TGTGTCCCATTATTGGTtat...............................................................................20TAT1.000.00-------------------------1.00----------------------------------------------------------------------------------------------------
....................................................................................................................GTTGTGTCCCATTATTGGTGATT..............................................................................2311.001.00--------------------------------------------------------------------------------------------------------------1.00---------------
......................................................................................................................TGTGTCCCATTATTGGTtatt..............................................................................21TATT1.000.00----------------1.00-------------------------------------------------------------------------------------------------------------
...................................................................TAATGAAATCTGAAATCAgtgg................................................................................................................................22GTGG1.000.00---------------------------------------------------------------------------1.00--------------------------------------------------
.................................................................................ATCACCAATAATGGGACACTAATG................................................................................................................2411.001.001.00-----------------------------------------------------------------------------------------------------------------------------
................................................................................AATCACCAATAATGGGACACT....................................................................................................................2111.001.001.00-----------------------------------------------------------------------------------------------------------------------------
...........................................................................TCTGAAATCACCAATAATGGGACAC.....................................................................................................................2521.001.00----------------------------------------------------------------------------------------------------------------0.50-------------
...........................................................................................................................................................................................AGGTGCCTTTTTCCCat.............17AT1.000.001.00-----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................TCCCATTATTGGTGATTTCAGATTTCAca..................................................................29CA1.000.00---------------------------------------------1.00--------------------------------------------------------------------------------
......................................................................................................................TGTGTCCCATTATTGGTGA................................................................................1921.001.00------------------------------1.00-----------------------------------------------------------------------------------------------
......................................................................................................................TGTGTCCCATTATTGGTGATTTt............................................................................23T1.0054.00------------------------------------------------------------------------------------------------------1.00-----------------------
..............................................................................................................................................................AAGGACATATCTACCAGATT.......................................2011.001.00-------------------------------------------------------------------------------------------------------1.00----------------------
.................................................................................ATCACCAATAATGGGACACTAtc.................................................................................................................23TC1.00219.00-------------------1.00----------------------------------------------------------------------------------------------------------
.....................................................................................................................TTGTGTCCCATTATTGGTGATg..............................................................................22G1.002.00----------------------------------------1.00-------------------------------------------------------------------------------------
.....................................................................................................................TTGTGTCCCATTATTGGTGAct..............................................................................22CT1.001.00------1.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTGTGTCCCATTATTGGTGttt..............................................................................22TTT1.000.00------------------------------------------------------------------------------------------1.00-----------------------------------
.....................................................................................................................TTGTGTCCCATTATTGGTGATc..............................................................................22C1.002.00------1.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTGTGTCCCATTATTGGTGctt..............................................................................22CTT1.000.00----------------------1.00-------------------------------------------------------------------------------------------------------
....................................................................................ACCAATAATGGGACACTAATGa...............................................................................................................22A1.000.00------1.00-----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................ATTTCATATATGATTgaac.......................................................19GAAC1.000.001.00-----------------------------------------------------------------------------------------------------------------------------
....................................................................AATGAAATCTGAAATCACCAATA..............................................................................................................................2311.001.00----------------------------------------------------------------------------------------------------------1.00-------------------
.................................................................................ATCACCAATAATGGGACACTc...................................................................................................................21C1.0019.00-------------------------------------1.00----------------------------------------------------------------------------------------
.....................................................................................................................TTGTGTCCCATTATTGttaa................................................................................20TTAA1.000.00-------------------------------------------------------------------------------------------1.00----------------------------------
.................................................................................ATCACCAATAATGGGACACTAgt.................................................................................................................23GT1.00219.00---------------------------1.00--------------------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACACTtgc.................................................................................................................23TGC1.0019.00------1.00-----------------------------------------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACACTAg..................................................................................................................22G1.00219.00--------------------------------------------------------------------1.00---------------------------------------------------------
..................................................................................TCACCAATAATGGGACACTAATa................................................................................................................23A1.008.00------1.00-----------------------------------------------------------------------------------------------------------------------
..................................................................................TCACCAATAATGGGACACTAt..................................................................................................................21T1.002.00------1.00-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................TGTGTCCCATTATTGattt................................................................................19ATTT1.000.001.00-----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTGTGTCCCATTATTGGTGA................................................................................2011.001.00------------------------------------------------------------------------------------------------------------------1.00-----------
.....................................................................................................................TTGTGTCCCATTATTGGTGAa...............................................................................21A1.001.00--------------------------------------------------------1.00---------------------------------------------------------------------
..............................................................................................................................................................AAGGACATATCTACCAGA.........................................1811.001.00----------------------------------------------------------1.00-------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACACca...................................................................................................................21CA0.672.00-0.33-----------------0.33----------------------------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACtgat...................................................................................................................21TGAT0.500.00-------------------------------------0.50----------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACAttaa..................................................................................................................22TTAA0.500.00--------------------------------------------0.50---------------------------------------------------------------------------------
.........................................................................................................................................................................TACCAGATTTCTTTATA...............................1720.500.50----------------------------------------------------0.50-------------------------------------------------------------------------
......................................................................................................................TGTGTCCCATTATTGGTGATcca............................................................................23CCA0.501.50------0.50-----------------------------------------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACAtta...................................................................................................................21TTA0.500.00-0.50----------------------------------------------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACAata...................................................................................................................21ATA0.500.00-0.50----------------------------------------------------------------------------------------------------------------------------
......................................................................................................................TGTGTCCCATTATTGGTGATctag...........................................................................24CTAG0.501.50------0.50-----------------------------------------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACgtcc...................................................................................................................21GTCC0.500.00---------------------------------------------------0.50--------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACgcta...................................................................................................................21GCTA0.500.000.50-----------------------------------------------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACgcca...................................................................................................................21GCCA0.500.00----------------------------------------------------------------0.50-------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACtcta...................................................................................................................21TCTA0.500.000.50-----------------------------------------------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACAgct...................................................................................................................21GCT0.500.00---------------------------------------------------------------------------------------0.50--------------------------------------
......................................................................................................................TGTGTCCCATTATTGGTGATc..............................................................................21C0.501.50------0.50-----------------------------------------------------------------------------------------------------------------------
...........................................................................................................................CCCATTATTGGTGATTTgtgt.........................................................................21GTGT0.500.00-------------------------------------------------------------------0.50----------------------------------------------------------
......................................................................................................................TGTGTCCCATTATTGGTGAgt..............................................................................21GT0.501.00---0.50--------------------------------------------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACACgcc..................................................................................................................22GCC0.332.00--------------------------------------------------------------------------------------------------------------------------0.33---
......TGTTGTCCTTTTTAGTG..................................................................................................................................................................................................1730.330.330.33-----------------------------------------------------------------------------------------------------------------------------
.................................................................................ATCACCAATAATGGGACACcct..................................................................................................................22CCT0.332.00-------------------------------------------------------------------------------------------------------------------------0.33----
.............................................................ATTAAATAATGAAATCT...........................................................................................................................................1750.200.20-----------------------------------------------------------------------------------------------------------------------------0.20
TAGACATGTTGTCCTTTTTAGTGAGTTAAATCAGGAGTCACTAATGTTGTTGTGTCCCATAATTAAATAATGAAATCTGAAATCACCAATAATGGGACACTAATGTGATTAATGTTGTTGTGTCCCATTATTGGTGATTTCAGATTTCATATATGATTAAGGACATATCTACCAGATTTCTTTATAAAGGTGCCTTTTTCCCTCTGTAATAAGTAAG
..................................................((((((((((((((((((((((((((((((.....))))))..))))))))))))))))))))))))..................................................
............................................................................77................................................................143........................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR037937(GSM510475)
293cand2. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR189786SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR029127(GSM416756)
A549. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR189787SRR029130(GSM416759)
DLD2. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR040028(GSM532913)
G026N. (cervix)		SRR189785SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR139215(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR040010(GSM532895)
G529N. (cervix)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR189783SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR139204(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSE20417(GSM514985)
Colon and lung cancer pool. 		TAX577739(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR139180(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139217(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR139183(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR139202(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)		SRR139176(SRX050650)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR139167(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR139216(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR139208(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		SRR191465(GSM715575)
113genomic small RNA (size selected RNA from . (breast)		SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)		SRR040036(GSM532921)
G243N. (cervix)		SRR139200(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR191467(GSM715577)
115genomic small RNA (size selected RNA from . (breast)		SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR139178(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR029128(GSM416757)
H520. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR139164(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)		SRR139177(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR139201(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR040039(GSM532924)
G531T. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR040022(GSM532907)
G575N. (cervix)		SRR139187(SRX050640)
FLASHPage purified small RNA (~15-40nt) from . (lung)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR139211(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR139179(SRX050638)
FLASHPage purified small RNA (~15-40nt) from . (liver)		SRR191619(GSM715729)
166genomic small RNA (size selected RNA from . (breast)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR139193(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		TAX577743(Rovira)
total RNA. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR139210(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)		SRR040015(GSM532900)
G623T. (cervix)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR139199(SRX050639)
FLASHPage purified small RNA (~15-40nt) from . (placenta)		SRR139174(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
................................................................................AATCACCAATAATGGGACAC..................................................................................................................... 2022.002.00--1.00---------------------------------------------------------------------------------------------------------------------------
....................................................................................................tcggGTGATTAATGTTGTTGT................................................................................................ 21tcgg2.000.002.00-----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................GTCCCATTATTGGTGATTTCAGA......................................................................... 2322.002.00-----------------------------------1.00------------------------------------------------------------------------------------------
.......................................................................................................................GTGTCCCATTATTGGTGAT............................................................................... 1932.002.00----------------------------------------------------0.33------------------------------------------------------------------0.330.33-----
..................................................................................TCACCAATAATGGGACACT.................................................................................................................... 1911.001.00--------------------------------------------------------------------------1.00---------------------------------------------------
.................................................................................................................................................................GACATATCTACCAGATT....................................... 1711.001.00-----------------------------------------------------------------------------------------------------------1.00------------------
.......................................................................................................................GTGTCCCATTATTGGTGATTTCAGA......................................................................... 2521.001.00----------------------------------------------------------------------------------------------------------------0.50-------------
................................................................................AATCACCAATAATGGGACACT.................................................................................................................... 2111.001.00----------------------------------------------------------------------------------------1.00-------------------------------------
....................................................................tgTGAAATCTGAAATCACCAATAATGGGA........................................................................................................................ 29tg1.000.00---------------------------------------------1.00--------------------------------------------------------------------------------
...................................................................................................CTAATGTGATTAATGTT..................................................................................................... 1711.001.001.00-----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................tgGTGTCCCATTATTGGTGAT............................................................................... 21tg0.672.00-0.33-----------------0.33----------------------------------------------------------------------------------------------------------
.....................................................................................................................tagcGTCCCATTATTGGTGAT............................................................................... 21tagc0.500.000.50-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................CATATCTACCAGATTTC..................................... 1720.500.50---------------------------------------------------------------------------------------------------------------------------0.50--
.....................................................................................................................atcaGTCCCATTATTGGTGAT............................................................................... 21atca0.500.00-------------------------------------0.50----------------------------------------------------------------------------------------
.....................................................................................................................ggacGTCCCATTATTGGTGAT............................................................................... 21ggac0.500.00---------------------------------------------------0.50--------------------------------------------------------------------------
....................................................................................................................ttaaTGTCCCATTATTGGTGAT............................................................................... 22ttaa0.500.00--------------------------------------------0.50---------------------------------------------------------------------------------
.....................................................................................................................agcTGTCCCATTATTGGTGAT............................................................................... 21agc0.500.00---------------------------------------------------------------------------------------0.50--------------------------------------
...........................................................................acacAAATCACCAATAATGGG......................................................................................................................... 21acac0.500.00-------------------------------------------------------------------0.50----------------------------------------------------------
.....................................................................................................................tagaGTCCCATTATTGGTGAT............................................................................... 21taga0.500.000.50-----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................tatTGTCCCATTATTGGTGAT............................................................................... 21tat0.500.00-0.50----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................taaTGTCCCATTATTGGTGAT............................................................................... 21taa0.500.00-0.50----------------------------------------------------------------------------------------------------------------------------
......................................................................................................................TGTGTCCCATTATTGGTGAT............................................................................... 2020.500.50----------------------------------------------------------------------------------------------------------------------------0.50-
.....................................................................................................................tggcGTCCCATTATTGGTGAT............................................................................... 21tggc0.500.00----------------------------------------------------------------0.50-------------------------------------------------------------
....................................................................................................................ggcGTGTCCCATTATTGGTGAT............................................................................... 22ggc0.332.00--------------------------------------------------------------------------------------------------------------------------0.33---
....................................................................................................................aggGTGTCCCATTATTGGTGAT............................................................................... 22agg0.332.00-------------------------------------------------------------------------------------------------------------------------0.33----