ID: hsa-mir-3156-3
chr21:14778655-14778831 -
Display Libraries
(2)
AGO2.ip 		(1)
B-CELL 		(6)
BRAIN 		(28)
BREAST 		(20)
CELL-LINE 		(3)
CERVIX 		(2)
HEART 		(1)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(2)
SKIN 		(1)
UTERUS
Showing top 68 reads
TGTGCTTAGATGAGCTAAATGTTTAAAGGTTGGAGACTGCCATGAAGCTCTGCAGAAGAAAGATCTGGAAGTGGGAGACACTTTCACTATATATAGTGGCTCCCACTTCCTGATCTTTCTCTCTGTATATATAGTACTTAGAGAAATTCAACTATCAGGACTCAGTTTTTCTAGCAG
..................................................(((((((((((((((.(((((((((((.((((............)))).))))))))))).))))))))).))))))..................................................
..................................................51..........................................................................127................................................
SizePerfect hitTotal NormPerfect NormSRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191480(GSM715590)
38genomic small RNA (size selected RNA from t. (breast)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		TAX577589(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040042(GSM532927)
G428N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR038855(GSM458538)
D10. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR191466(GSM715576)
114genomic small RNA (size selected RNA from . (breast)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR191403(GSM715513)
44genomic small RNA (size selected RNA from t. (breast)		SRR040014(GSM532899)
G623N. (cervix)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		TAX577745(Rovira)
total RNA. (breast)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040008(GSM532893)
G727N. (cervix)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
..........................................................AAAGATCTGGAAGTGGGAGAC..................................................................................................21318.3318.334.332.331.00-0.330.330.67-1.670.671.670.330.670.330.33--0.33---0.33--0.33------------0.33--0.33-0.330.33----0.33---0.33--0.33-0.33-------
..........................................................AAAGATCTGGAAGTGGGAGA...................................................................................................20315.6715.673.331.333.67--0.67---0.67-1.000.330.67-0.670.33---0.330.33---0.67--------0.33-----------0.33-----------0.330.330.33----
..........................................................AAAGATCTGGAAGTGGGAGACA.................................................................................................2234.674.671.000.670.33-1.330.33--------0.33-----0.33---0.33----------------------------------------
......................................................GAAGAAAGATCTGGAAGTGGG......................................................................................................2134.004.00---4.00-------------------------------------------------------------
..........................................................AAAGATCTGGAAGTGGGAGACt.................................................................................................22T4.0018.330.330.670.33--0.670.67-0.33-----0.33-0.67------------------------------------------------
.....................................................AGAAGAAAGATCTGGAAGTGGGA.....................................................................................................2333.003.00-1.33---------0.330.33--0.33---0.33------------------0.33--------------------------
..........................................................AAAGATCTGGAAGTGGGAGACc.................................................................................................22C2.3318.331.00-0.33-0.33--------------0.33---------0.33-----------------------------------
..........................................................AAAGATCTGGAAGTGGGAGAaa.................................................................................................22AA1.3315.67-0.33-------0.33-------0.33----0.33------------------------------------------
.....................................................AGAAGAAAGATCTGGAAGTG........................................................................................................2041.001.00-0.25------------------------0.25-0.50------------------------------------
..........................................................AAAGATCTGGAAGTGGGAGACAa................................................................................................23A1.004.670.330.33------------------------------------------------------0.33--------
..........................................................AAAGATCTGGAAGTGGGAGACAtc...............................................................................................24TC1.004.67------------------1.00----------------------------------------------
..........................................................AAAGATCTGGAAGTGGGAGAa..................................................................................................21A1.0015.670.67-0.33--------------------------------------------------------------
..........................................................AAAGATCTGGAAGTGGGAGt...................................................................................................20T0.710.570.140.14---0.140.14---------------------------------------------------------0.14
..........................................................AAAGATCTGGAAGTGGGAGAat.................................................................................................22AT0.6715.67--0.33--------------------------------------0.33-----------------------
.....................................TGCCATGAAGCTCTGCAGctc.......................................................................................................................21CTC0.670.00---------------------------------------------0.33---0.33---------------
.........................................................GAAAGATCTGGAAGTGGGAGA...................................................................................................2130.670.67-----0.330.33----------------------------------------------------------
...........................................................AAGATCTGGAAGTGGGAGAC..................................................................................................2030.670.67------0.33---------------0.33------------------------------------------
..........................................................AAAGATCTGGAAGTGGGAGAtt.................................................................................................22TT0.6715.67--0.67--------------------------------------------------------------
..........................................................AAAGATCTGGAAGTGGGAG....................................................................................................1970.570.570.14-----------0.14--0.14-----------------------------------------------0.14-
........................................................................................................................CTCTGTATATATAGTAacc......................................19ACC0.500.00---------------------------0.50-------------------------------------
...........................................................AAGATCTGGAAGTGGGAGACAt................................................................................................22T0.330.33---------0.33-------------------------------------------------------
..........................................................AAAGATCTGGAAGTGGGAGACAC................................................................................................2330.330.33----0.33------------------------------------------------------------
............................................................AGATCTGGAAGTGGGAGACACT...............................................................................................2230.330.33------------------------------0.33----------------------------------
................................................TCTGCAGAAGAAAGATCTGGAAGTGG.......................................................................................................2630.330.33-----------------------0.33-----------------------------------------
.........................................................GAAAGATCTGGAAGTGGGAGACc.................................................................................................23C0.330.000.33----------------------------------------------------------------
...........................................................AAGATCTGGAAGTGGGAGA...................................................................................................1930.330.330.33----------------------------------------------------------------
..........................................................AAAGATCTGGAAGTGGGAGACAag...............................................................................................24AG0.334.67-------------------------------0.33---------------------------------
.......................................................AAGAAAGATCTGGAAGTGGGAG....................................................................................................2230.330.33----0.33------------------------------------------------------------
.....................................................AGAAGAAAGATCTGGAAGTGG.......................................................................................................2130.330.33-0.33---------------------------------------------------------------
.....................................................AGAAGAAAGATCTGGAAGTGGGAGACA.................................................................................................2730.330.33--------------0.33--------------------------------------------------
...........................................................AAGATCTGGAAGTGGGAGAa..................................................................................................20A0.330.330.33----------------------------------------------------------------
...............................................................TCTGGAAGTGGGAGAaca................................................................................................18ACA0.330.00---------------------------------------------------0.33-------------
.......................................................AAGAAAGATCTGGAAGTGGGAGAa..................................................................................................24A0.330.00----0.33------------------------------------------------------------
............................................................AGATCTGGAAGTGGGAGACAC................................................................................................2130.330.33-0.33---------------------------------------------------------------
.....................................TGCCATGAAGCTCTGtcg..........................................................................................................................18TCG0.330.00-----------------------------------0.33-----------------------------
...........................................................AAGATCTGGAAGTGGGAGACt.................................................................................................21T0.330.67-0.33---------------------------------------------------------------
..............................................................ATCTGGAAGTGGGAGACACTT..............................................................................................2130.330.33---------------------0.33-------------------------------------------
........................................................AGAAAGATCTGGAAGTGGGAGA...................................................................................................2230.330.33--------------------------0.33--------------------------------------
.....................................................AGAAGAAAGATCTGGAAGTGGGAt....................................................................................................24T0.333.00-0.33---------------------------------------------------------------
............................................................AGATCTGGAAGTGGGAGACAa................................................................................................21A0.330.33--------------------0.33--------------------------------------------
..........................................................AAAGATCTGGAAGTGGGAGAt..................................................................................................21T0.3315.670.33----------------------------------------------------------------
........................AAAGGTTGGAGACTGCtcct.....................................................................................................................................20TCCT0.330.00---------------------------------------0.33-------------------------
.......................TAAAGGTTGGAGACTGCCATGAAGCTCTG.............................................................................................................................2930.330.33-----------------------------------------------0.33-----------------
............................................................AGATCTGGAAGTGGGAGACA.................................................................................................2030.330.33-----------------0.33-----------------------------------------------
..........................................................AAAGATCTGGAAGTGGGAGACta................................................................................................23TA0.3318.33------------------------------------------------------0.33----------
.................................AGACTGCCATGAAGCaagc.............................................................................................................................19AAGC0.330.00---------------------------------0.33-------------------------------
...........................................................AAGATCTGGAAGTGGGAGACAC................................................................................................2230.330.33--------------------------------------------0.33--------------------
.........................................................GAAAGATCTGGAAGTGGGAGAat.................................................................................................23AT0.330.67-0.33---------------------------------------------------------------
..........................................TGAAGCTCTGCAGAAGcata...................................................................................................................20CATA0.330.00------------------------------------0.33----------------------------
..........................................................AAAGATCTGGAAGTGGGAGAaaaa...............................................................................................24AAAA0.3315.67-----0.33-----------------------------------------------------------
.....................................TGCCATGAAGCTCTGtagg.........................................................................................................................19TAGG0.330.00-------------0.33---------------------------------------------------
...........................................GAAGCTCTGCAGAAGAAgc...................................................................................................................19GC0.330.00--------------------------------0.33--------------------------------
...........................................................AAGATCTGGAAGTGGGAGACA.................................................................................................2130.330.33-0.33---------------------------------------------------------------
.............................................................GATCTGGAAGTGGGAGACACT...............................................................................................2130.330.33-----------------------------------------------------0.33-----------
......................................................GAAGAAAGATCTGGAAGTGGGAGAC..................................................................................................2530.330.33-------------------0.33---------------------------------------------
.....................................................AGAAGAAAGATCTGGAAGT.........................................................................................................1940.250.25-------------------------------------------------------------0.25---
.............................................................GATCTGGAAGTGGGAagcc.................................................................................................19AGCC0.200.00--------------------------------------------------------------0.20--
..........................................................AAAGATCTGGAAGTGGGAct...................................................................................................20CT0.200.00-0.20---------------------------------------------------------------
..........................................................AAAGATCTGGAAGTGGGAGgca.................................................................................................22GCA0.140.57-----0.14-----------------------------------------------------------
..........................................................AAAGATCTGGAAGTGGGAGtca.................................................................................................22TCA0.140.57----------------0.14------------------------------------------------
..........................................................AAAGATCTGGAAGTGGGAGgc..................................................................................................21GC0.140.57-----------------------------0.14-----------------------------------
..........................................................AAAGATCTGGAAGTGGG......................................................................................................1790.110.11-0.11---------------------------------------------------------------
..........................................................AAAGATCTGGAAGTGGGtgg...................................................................................................20TGG0.110.11------------------------------0.11----------------------------------
TGTGCTTAGATGAGCTAAATGTTTAAAGGTTGGAGACTGCCATGAAGCTCTGCAGAAGAAAGATCTGGAAGTGGGAGACACTTTCACTATATATAGTGGCTCCCACTTCCTGATCTTTCTCTCTGTATATATAGTACTTAGAGAAATTCAACTATCAGGACTCAGTTTTTCTAGCAG
..................................................(((((((((((((((.(((((((((((.((((............)))).))))))))))).))))))))).))))))..................................................
..................................................51..........................................................................127................................................
SizePerfect hitTotal NormPerfect NormSRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191480(GSM715590)
38genomic small RNA (size selected RNA from t. (breast)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		TAX577589(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040042(GSM532927)
G428N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR038855(GSM458538)
D10. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR191466(GSM715576)
114genomic small RNA (size selected RNA from . (breast)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR191403(GSM715513)
44genomic small RNA (size selected RNA from t. (breast)		SRR040014(GSM532899)
G623N. (cervix)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		TAX577745(Rovira)
total RNA. (breast)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040008(GSM532893)
G727N. (cervix)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
.....................................................................................................aaagCTTCCTGATCTTTCT......................................................... 19aaag2.000.00-------2.00---------------------------------------------------------
........................................................AGAAAGATCTGGAAGTGGGAG.................................................................................................... 2160.500.50-0.33-------------0.17-------------------------------------------------
..........................................................AAAGATCTGGAAGTGGGAGACA................................................................................................. 2230.330.33-----------------------0.33-----------------------------------------
.........................................................GAAAGATCTGGAAGTGGGAG.................................................................................................... 2060.330.33-0.33---------------------------------------------------------------
.......................................................AAGAAAGATCTGGAAGTGGGAG.................................................................................................... 2230.330.33--------------------------------------------------0.33--------------
..........................................................AAAGATCTGGAAGTGGGAG.................................................................................................... 1970.140.14-0.14---------------------------------------------------------------