ID: hsa-mir-3122
chr1:212250905-212251077 +
Display Libraries
(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(1)
AGO2.ip 		(16)
B-CELL 		(1)
BRAIN 		(6)
BREAST 		(32)
CELL-LINE 		(1)
CERVIX 		(1)
HEART 		(1)
HELA 		(3)
LIVER 		(2)
OTHER 		(12)
SKIN 		(4)
UTERUS 		(1)
XRN.ip
Showing top 55 reads
ATCCAACTCAAAATGAAGGAGTATAACTTTGGGTTTTGTAAAAGTTAGTGACCAGCTCTGTTGGGACAAGAGGACGGTCTTCTTTTGGAAGGAAGACCATCATCTTGTCCGAAGAGAGCTGGTAGCATGTTTCAGAAATCTTCAGGTTTCACAGTTAATTTAGTGTTCCTAGA
..................................................(((((((((.((.((((((((.((.(((((((((.....))))))))).)).)))))))).)).)))))))))..................................................
..................................................51......................................................................123................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR189787SRR189782SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR038859(GSM458542)
MM386. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR038856(GSM458539)
D11. (cell line)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR343334SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)		SRR038855(GSM458538)
D10. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR343335SRR038860(GSM458543)
MM426. (cell line)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038863(GSM458546)
MM603. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038853(GSM458536)
MELB. (cell line)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
...........................................................GTTGGGACAAGAGGACGGTCTTC...........................................................................................23189.0089.0043.002.004.006.00--7.002.001.001.00-1.00--4.00-2.002.00------3.001.00---1.00-1.00-----1.00--------1.00-----1.00--------------1.00------1.00-1.00--1.001.00---
...........................................................GTTGGGACAAGAGGACGGTCT.............................................................................................21159.0059.0021.0013.003.003.001.00---1.001.00--1.00--2.00---1.00--------2.00-2.00-1.00---1.00----1.001.00-1.00-----------1.00-----1.00-1.00-------------------
...........................................................GTTGGGACAAGAGGACGGTCTT............................................................................................22146.0046.006.00-10.002.0013.001.00-----1.001.001.001.001.001.00-3.001.001.00-----------1.00--1.00--------------------------------1.00---------------
.............................................................TGGGACAAGAGGACGGTCTTCT..........................................................................................22117.0017.00---1.00-9.00-----1.00----1.001.00-------------------------1.00-----------1.00-----1.00---------------1.00------
...........................................................GTTGGGACAAGAGGACGGTC..............................................................................................20112.0012.00-7.00-------------------------------1.00-1.00-----------------1.00----1.00----------1.00--------------
..............................................................GGGACAAGAGGACGGTCTTCTT.........................................................................................22111.0011.007.00--------------------2.00---1.00---1.00------------------------------------------------------
.............................................................TGGGACAAGAGGACGGTCTT............................................................................................20110.0010.00-2.00------3.001.00----------1.00-1.00-----------2.00-------------------------------------------------
.............................................................TGGGACAAGAGGACGGTCTTC...........................................................................................2119.009.003.00------2.00-------------------1.00-----------------------------1.00-1.00-------------1.00----------
............................................................TTGGGACAAGAGGACGGTCTTC...........................................................................................2218.008.00-----3.00--1.00----2.00----1.00-----------------------------------------------1.00-----------------
...........................................................GTTGGGACAAGAGGACGGTCTTCT..........................................................................................2416.006.004.00------------2.00----------------------------------------------------------------------
...........................................................GTTGGGACAAGAGGACGGT...............................................................................................1914.004.00--1.00----------------------------------------------1.00-1.00--------1.00-----------------------
...........................................................GTTGGGACAAGAGGACGGTCTTt...........................................................................................23T4.0046.001.00----------------1.00-2.00----------------------------------------------------------------
..............................................................GGGACAAGAGGACGGTCTTCT..........................................................................................2113.003.00-------1.00--------------------------------1.00------------------------1.00------------------
..............................................................GGGACAAGAGGACGGTCTTC...........................................................................................2013.003.00-------1.00----1.00------------1.00----------------------------------------------------------
...........................................................GTTGGGACAAGAGGACGGTCTa............................................................................................22A2.0059.00-------1.00--------------------------------------------------------------1.00-------------
...........................................................GTTGGGACAAGAGGACGGTCTcc...........................................................................................23CC2.0059.00----------2.00-------------------------------------------------------------------------
............................................................TTGGGACAAGAGGACGGTCTTCctc........................................................................................25CTC2.008.00-----------------------2.00------------------------------------------------------------
.............................................................TGGGACAAGAGGACGGTCTTCTT.........................................................................................2312.002.00---------------------------2.00--------------------------------------------------------
............................................................TTGGGACAAGAGGACGGTCTT............................................................................................2112.002.00------------1.00-----------------------------------------------------------1.00-----------
.............................................................TGGGACAAGAGGACGGTCT.............................................................................................1912.002.00---------1.00------------------------------------------------------------------------1.00-
...........................................................GTTGGGACAAGAGGACGGTCc.............................................................................................21C1.0012.001.00-----------------------------------------------------------------------------------
..............................................................GGGACAAGAGGACGGTCTTCTTT........................................................................................2311.001.00-----------1.00------------------------------------------------------------------------
...........................................................GTTGGGACAAGAGGACGGTgt.............................................................................................21GT1.004.001.00-----------------------------------------------------------------------------------
.............................................................................................AGACCATCATCTTGTCCGAAGt..........................................................22T1.000.00---1.00--------------------------------------------------------------------------------
..............................................................GGGACAAGAGGACGGTCTcctt.........................................................................................22CCTT1.000.00----------1.00-------------------------------------------------------------------------
..............................................................GGGACAAGAGGACGGTCTTCg..........................................................................................21G1.003.00-----------1.00------------------------------------------------------------------------
...........................................................GTTGGGACAAGAGGACGGTgttc...........................................................................................23GTTC1.004.001.00-----------------------------------------------------------------------------------
...........................................................GTTGGGACAAGAGGACGGcctt............................................................................................22CCTT1.000.00----------1.00-------------------------------------------------------------------------
...........................................................GTTGGGACAAGAGGACGGTCTTCTTctga.....................................................................................29CTGA1.000.00-----------------------1.00------------------------------------------------------------
..........................................................................................................GTCCGAAGAGAGCTGGTAGC...............................................2011.001.00-----------------------------------------------------------------------1.00------------
...........................................................GTTGGGACAAGAGGACGGcct.............................................................................................21CCT1.000.00----------1.00-------------------------------------------------------------------------
..........................................................TGTTGGGACAAGAGGACGGTC..............................................................................................2111.001.00---------------1.00--------------------------------------------------------------------
...........................................................GTTGGGACAAGAGGACGGTCTTat..........................................................................................24AT1.0046.001.00-----------------------------------------------------------------------------------
............................................................TTGGGACAAGAGGACGGTCTTt...........................................................................................22T1.002.00-------------------------------1.00----------------------------------------------------
...........................................................GTTGGGACAAGAGGACGttct.............................................................................................21TTCT1.000.00---------------------------------------1.00--------------------------------------------
...........................................................GTTGGGACAAGAGGACGGTa..............................................................................................20A1.004.00------------------------------------------------------1.00-----------------------------
...........................................................GTTGGGACAAGAGGACGGcca.............................................................................................21CCA1.000.00------------------------------------------------------------------------------1.00-----
...........................................................GTTGGGACAAGAGGACGGTCa.............................................................................................21A1.0012.00---------1.00--------------------------------------------------------------------------
....................................................................................................CATCTTGTCCGAAGAGAGCTGGTAG................................................2511.001.00---------------------------------------------1.00--------------------------------------
...........................................................GTTGGGACAAGAGGACGGgctt............................................................................................22GCTT1.000.00--1.00---------------------------------------------------------------------------------
.............................................................TGGGACAAGAGGACGGgctt............................................................................................20GCTT1.000.00------------------------------------1.00-----------------------------------------------
..........................................................TGTTGGGACAAGAGGACGGTCTTaa..........................................................................................25AA1.000.00---------------------1.00--------------------------------------------------------------
..........................................................................................................GTCCGAAGAGAGCTGGgagc...............................................20GAGC1.000.00--------------------------------------1.00---------------------------------------------
...........................................................GTTGGGACAAGAGGACGGTCTTCa..........................................................................................24A1.0089.00---1.00--------------------------------------------------------------------------------
...........................................................GTTGGGACAAGAGGACGGgct.............................................................................................21GCT1.000.001.00-----------------------------------------------------------------------------------
..............................................................GGGACAAGAGGACGGTCTTCTa.........................................................................................22A1.003.00------------1.00-----------------------------------------------------------------------
..............................................................GGGACAAGAGGACGGTCTT............................................................................................1911.001.00---------------------------------------------------------------------------------1.00--
..............................................................................................................GAAGAGAGCTGGTAGaata............................................19AATA1.000.00---------------------------------------------------------------------------1.00--------
...........................................................GTTGGGACAAGAGGA...................................................................................................1570.140.14-----------------------------------------------------------------------------------0.14
ATCCAACTCAAAATGAAGGAGTATAACTTTGGGTTTTGTAAAAGTTAGTGACCAGCTCTGTTGGGACAAGAGGACGGTCTTCTTTTGGAAGGAAGACCATCATCTTGTCCGAAGAGAGCTGGTAGCATGTTTCAGAAATCTTCAGGTTTCACAGTTAATTTAGTGTTCCTAGA
..................................................(((((((((.((.((((((((.((.(((((((((.....))))))))).)).)))))))).)).)))))))))..................................................
..................................................51......................................................................123................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR189787SRR189782SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR038859(GSM458542)
MM386. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR038856(GSM458539)
D11. (cell line)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR343334SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)		SRR038855(GSM458538)
D10. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR343335SRR038860(GSM458543)
MM426. (cell line)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038863(GSM458546)
MM603. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038853(GSM458536)
MELB. (cell line)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
..............................................................................................GACCATCATCTTGTCCGAA............................................................ 1912.002.00---------------------------------1.00-------------1.00------------------------------------
.............................................................................................AGACCATCATCTTGTCCGAA............................................................ 2012.002.00--------------------------1.00---------------------1.00-----------------------------------
............................................................................................AAGACCATCATCTTGTCCGA............................................................. 2012.002.00--------------------------2.00---------------------------------------------------------
.......................................................................................................CTTGTCCGAAGAGAGCTGGTA................................................. 2112.002.00----------------------2.00-------------------------------------------------------------
..............................................cggcACCAGCTCTGTTGGG............................................................................................................ 19cggc1.000.00--------------------------------------------------1.00---------------------------------
...............................................................................................ACCATCATCTTGTCCGAA............................................................ 1811.001.00---------------------------------------------------------------1.00--------------------
............................................................................................AAGACCATCATCTTGTCCGAA............................................................ 2111.001.00--------------------1.00---------------------------------------------------------------