hsa-mir-1288

Display Libraries
(1) AGO1.ip	(1) AGO1.ip OTHER.mut	(2) AGO2.ip	(8) B-CELL	(5) BRAIN	(8) BREAST	(37) CELL-LINE	(3) CERVIX	(3) FIBROBLAST	(6) HEART	(1) HELA	(5) LIVER	(1) OTHER	(41) SKIN	(1) THYMUS	(1) XRN.ip

CCCCCAGACAATGGAAGGGGGGCGACAGCTGTCCATGGGGGCACTGCTAAGAGGGTGTTGATCAGCAGATCAGGACTGTAACTCACCATAGTGGTGGACTGCCCTGATCTGGAGACCACTGCCTTTCGAGAATAATTCACCCTACAGAAGCTATCTGAGCATCACCAGACAGGGT
..................................................((.((..(((((((((...(((..(((((.....)))))..))))))))))))..)).))...................................................
..........................................................59..........................................................119......................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)

SRR189782

SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)

SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)

SRR037939(GSM510477)
293cand5_rep1. (cell line)

SRR037940(GSM510478)
293cand5_rep2. (cell line)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

SRR037943(GSM510481)
293DcrTN. (cell line)

SRR037937(GSM510475)
293cand2. (cell line)

SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)

SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)

SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)

SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)

SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)

SRR033724(GSM497069)
L428 cell line (L428). (B cell)

SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)

SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)

SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)

SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)

SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)

GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR038860(GSM458543)
MM426. (cell line)

SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR060168(GSM565978)
5-8F_nucleus. (cell line)

SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)

SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)

SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)

SRR037936(GSM510474)
293cand1. (cell line)

SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR139216(SRX050633)
FLASHPage purified small RNA (~15-40nt) from . (thymus)

SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)

SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)

GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)

SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)

SRR029128(GSM416757)
H520. (cell line)

SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)

DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)

SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)

SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)

SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)

SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)

SRR037944(GSM510482)
293DcrTN_cand5. (cell line)

TAX577745(Rovira)
total RNA. (breast)

SRR037933(GSM510471)
293cand4_rep2. (cell line)

SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)

RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)

GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)

SRR191427(GSM715537)
153genomic small RNA (size selected RNA from . (breast)

SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)

SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)

GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)

SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)

SRR191485(GSM715595)
123genomic small RNA (size selected RNA from . (breast)

SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)

SRR037935(GSM510473)
293cand3. (cell line)

SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)

SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)

TAX577746(Rovira)
total RNA. (breast)

SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)

SRR139167(SRX050631)
FLASHPage purified small RNA (~15-40nt) from . (heart)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)

SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)

SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)

SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)

SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR343333(GSM796036)
KSHV (HHV8). (cell line)

GSM416733(GSM416733)
HEK293. (cell line)

SRR037931(GSM510469)
293GFP. (cell line)

SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)

SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)

SRR040007(GSM532892)
G601T. (cervix)

SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)

GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)

SRR040025(GSM532910)
G613T. (cervix)

SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)

SRR038861(GSM458544)
MM466. (cell line)

SRR040014(GSM532899)
G623N. (cervix)

SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)

SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)

SRR038859(GSM458542)
MM386. (cell line)

SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)

GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)

SRR037934(GSM510472)
293cand4_rep3. (cell line)

SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)

SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)

SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)

SRR038853(GSM458536)
MELB. (cell line)

TAX577453(Rovira)
total RNA. (breast)

SRR038856(GSM458539)
D11. (cell line)

SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)

SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)

SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)

..............................................................................................TGGACTGCCCTGATCTGGAGA............................................................

187.00

44.00

7.00

3.00

4.00

6.00

4.00

3.00

1.00

3.00

4.00

2.00

3.00

2.00

1.00

3.00

2.00

3.00

1.00

2.00

1.00

2.00

1.00

2.00

1.00

2.00

1.00

..............................................................................................TGGACTGCCCTGATCTGGAG.............................................................

67.00

5.00

7.00

4.00

3.00

2.00

3.00

4.00

1.00

2.00

1.00

2.00

3.00

1.00

2.00

1.00

..............................................................................................TGGACTGCCCTGATCTGGAGt............................................................

15.00

67.00

8.00

1.00

...............................................................AGCAGATCAGGACTGTAACTCACC........................................................................................

12.00

2.00

5.00

1.00

...............................................................AGCAGATCAGGACTGTAACTCA..........................................................................................

11.00

3.00

1.00

3.00

1.00

...............................................................AGCAGATCAGGACTGTAACTC...........................................................................................

8.00

1.00

5.00

1.00

...............................................................AGCAGATCAGGACTGTAACTCACCA.......................................................................................

5.00

..............................................................................................TGGACTGCCCTGATCTGGAGAa...........................................................

5.00

187.00

1.00

...............................................................AGCAGATCAGGACTGTAACTCAC.........................................................................................

4.00

2.00

1.00

..............................................................................................TGGACTGCCCTGATCTGGAGAta..........................................................

3.00

187.00

2.00

1.00

.............................................................................................GTGGACTGCCCTGATCTGGAGA............................................................

3.00

1.00

..............................................................................................TGGACTGCCCTGATCTGGAGAat..........................................................

2.00

187.00

1.00

..............................................................................................TGGACTGCCCTGATCTGGAGAaa..........................................................

2.00

187.00

1.00

.....AGACAATGGAAGGGGtgat.......................................................................................................................................................

TGAT

2.00

0.00

2.00

...............................................................AGCAGATCAGGACTGTAAC.............................................................................................

2.00

1.00

...........................................................................................................................TTTCGAGAATAATTCACCCTACAGAA..........................

2.00

..............................................................................................TGGACTGCCCTGATCTGGAta............................................................

1.00

.............................................................................................GTGGACTGCCCTGATCTGGAGAt...........................................................

1.00

3.00

1.00

.......................................................................AGGACTGTAACTCACCATAGTGGTGGAC............................................................................

1.00

..............................................................................................TGGACTGCCCTGATCTGtagt............................................................

TAGT

1.00

0.00

1.00

..............................................................................................TGGACTGCCCTGATCTGGAGAtag.........................................................

TAG

1.00

187.00

1.00

...............................................................................................GGACTGCCCTGATCTGGAG.............................................................

1.00

...............................................................AGCAGATCAGGACTGTAACTtact........................................................................................

TACT

1.00

0.00

1.00

..............................................................................................TGGACTGCCCTGATCTGtaga............................................................

TAGA

1.00

0.00

1.00

..............................................................................................TGGACTGCCCTGATCTGGcg.............................................................

1.00

0.00

1.00

..............................................................................................TGGACTGCCCTGATCTGGA..............................................................

1.00

....................................GGGGGCACTGCTAAGggg.........................................................................................................................

GGG

1.00

0.00

1.00

..............................................................................................TGGACTGCCCTGATCTGcag.............................................................

CAG

1.00

0.00

1.00

..............................................................................................TGGACTGCCCTGATCTGaaa.............................................................

AAA

1.00

0.00

1.00

........................................................................................................................................TCACCCTACAGAAGCgcca....................

GCCA

1.00

0.00

1.00