ID: hsa-mir-1260
chr14:77732511-77732683 +
Display Libraries
(1)
AGO2.ip
(5)
B-CELL
(3)
BRAIN
(43)
BREAST
(46)
CELL-LINE
(20)
CERVIX
(1)
FIBROBLAST
(5)
HEART
(1)
HELA
(14)
LIVER
(1)
LUNG
(1)
OTHER
(48)
SKIN
(1)
UTERUS
Showing top 63 reads
ACCTGAAGAAGCAGGACAGACAGAAGAGCCCCATCCTCTCCCACCTCCATACCTTTCCAGCTCATCCCACCTCTGCCACCAAAACACTCATCGCGGGGTCAGAGGGAGTGCCAAAAAAGGTAAAAAGAAACGCAAGAAAGAGGCTACTGGGGATGAGGGGACACCCAGAAGCC
..................................................((((((...((...((((...((((((.((..............)))).))))))))..))....))))))....................................................
..................................................51......................................................................123................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR040042(GSM532927)
G428N. (cervix)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR040043(GSM532928)
G428T. (cervix)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029127(GSM416756)
A549. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
GSM532877(GSM532877)
G691N. (cervix)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
GSM532875(GSM532875)
G547N. (cervix)
SRR139183(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)
SRR029124(GSM416753)
HeLa. (hela)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR029128(GSM416757)
H520. (cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577579(Rovira)
total RNA. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR040013(GSM532898)
G648T. (cervix)
SRR191529(GSM715639)
131genomic small RNA (size selected RNA from . (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR139170(SRX050649)
FLASHPage purified small RNA (~15-40nt) from . (heart)
SRR189782SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR029126(GSM416755)
143B. (cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR191457(GSM715567)
27genomic small RNA (size selected RNA from t. (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR038858(GSM458541)
MEL202. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038854(GSM458537)
MM653. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR038857(GSM458540)
D20. (cell line)
SRR040032(GSM532917)
G603N. (cervix)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577744(Rovira)
total RNA. (breast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038862(GSM458545)
MM472. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR139168(SRX050648)
FLASHPage purified small RNA (~15-40nt) from . (brain)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191514(GSM715624)
165genomic small RNA (size selected RNA from . (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR191488(GSM715598)
14genomic small RNA (size selected RNA from t. (breast)
GSM532878(GSM532878)
G691T. (cervix)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR191462(GSM715572)
1genomic small RNA (size selected RNA from to. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR191480(GSM715590)
38genomic small RNA (size selected RNA from t. (breast)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR029129(GSM416758)
SW480. (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
GSM532871(GSM532871)
G652N. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)
SRR191475(GSM715585)
18genomic small RNA (size selected RNA from t. (breast)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR040006(GSM532891)
G601N. (cervix)
SRR191525(GSM715635)
121genomic small RNA (size selected RNA from . (breast)
SRR040017(GSM532902)
G645T. (cervix)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)
SRR038860(GSM458543)
MM426. (cell line)
GSM532882(GSM532882)
G696T. (cervix)
SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR038863(GSM458546)
MM603. (cell line)
SRR191521(GSM715631)
92genomic small RNA (size selected RNA from t. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR040027(GSM532912)
G220T. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532880(GSM532880)
G659T. (cervix)
GSM532874(GSM532874)
G699T. (cervix)
TAX577742(Rovira)
total RNA. (breast)
...............................................................ATCCCACCTCTGCCACCA............................................................................................184304.75304.7576.0031.5019.0017.5015.2511.2510.509.259.007.256.255.504.503.003.751.752.251.25-3.001.252.502.001.251.25-0.501.001.750.750.250.251.251.001.500.501.500.250.251.250.251.250.251.001.251.251.251.00-0.50------------0.500.50-0.750.250.500.750.250.750.750.750.500.750.750.500.250.500.500.500.500.250.50-0.500.500.500.500.500.500.500.500.500.500.500.500.500.500.500.500.50-0.500.500.50-0.250.250.25---0.25-0.250.250.250.250.250.250.250.250.250.250.250.250.250.250.250.250.250.250.250.250.250.25-0.250.250.250.250.250.250.250.250.250.250.250.250.250.250.250.25-0.250.250.250.250.250.250.250.250.250.250.250.250.250.250.250.250.250.250.250.250.250.250.25-0.250.250.250.250.25------
...............................................................ATCCCACCTCTGCCACCAAA..........................................................................................20116.0016.00-6.00--2.001.00-1.00---------1.00--------1.00----------1.00--------------1.00----1.00-1.00----------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCAaca............................................................................................18ACA12.000.008.00-----1.00---2.00------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAA...........................................................................................19210.0010.001.002.500.501.000.50----1.00---0.50-0.50------0.50---0.50------0.50-----------------------------0.50--------------------------------------0.50---------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAAAA.........................................................................................2117.007.00-3.00-------------1.00-------------1.001.00---------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAAAt.........................................................................................21T6.0016.006.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAAAAa........................................................................................22A3.007.00-1.00--1.00---------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................CATCCCACCTCTGCCACCA............................................................................................1933.003.000.33----0.33---0.33---------------------------------------------------------0.33---------0.33----------------------------0.33---0.330.330.33-----------------------------------------------------------------------------
................................................................TCCCACCTCTGCCACCAAAAa........................................................................................21A2.000.00-1.00----------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACC.............................................................................................1791.781.78--------0.22------0.11---------------------0.11---------0.220.110.11---------------0.22----------------------------------------0.110.11------------------------------------------------------------------------------0.110.110.110.11
...............................................................ATCCCACCTCTGCCACCAAt..........................................................................................20T1.5010.00-----------0.50-------------------0.50-----------------0.50--------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAtt..........................................................................................20TT1.25304.75---0.50---------------------------------------------------------------------0.25--------------------------------------------------------------------------------0.25-----------------------0.25-----------
..............................................................CATCCCACCTCTGCCACCc............................................................................................19C1.000.00------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACtaga..........................................................................................20TAGA1.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAAAg.........................................................................................21G1.0016.00--------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAca..........................................................................................20CA1.00304.75-0.75------------------------------0.25-------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................TCATCCCACCTCTGCCACta............................................................................................20TA1.000.00-------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................TCCCACCTCTGCCACCAAga.........................................................................................20GA1.000.00------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCAtcaa...........................................................................................19TCAA1.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................TCCCACCTCTGCCACCAAAgt........................................................................................21GT1.000.00-------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACaatt..........................................................................................20AATT1.000.00---------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------
.............................................................TCATCCCACCTCTGCCACCA............................................................................................2021.001.00--0.50----------0.50--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAta..........................................................................................20TA1.00304.750.25----------------0.25------------0.50---------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................CGGGGTCAGAGGGAGggca.............................................................19GGCA1.000.00-------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAAAga........................................................................................22GA1.0016.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAAAAt........................................................................................22T1.007.00-----------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCAtta............................................................................................18TTA1.000.00------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCAacaa...........................................................................................19ACAA1.000.00--------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................TCATCCCACCTCTGCCACCc............................................................................................20C1.000.00----------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAAga.........................................................................................21GA1.0010.00-----------------0.50--------------------------------------------0.50-------------------------------------------------------------------------------------------------------------------------------
..........GCAGGACAGACAGAAGAG.................................................................................................................................................1830.670.67------------------------------------------------------------------0.67---------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAAg..........................................................................................20G0.5010.000.50---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................CCACCTCTGCCACCAttt.........................................................................................18TTT0.500.00---------------------------------------------------------------------0.50------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAtaa.........................................................................................21TAA0.50304.75----------------------------------------------------------------------------------0.25-------------------------------0.25---------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAAta.........................................................................................21TA0.5010.00-0.50--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAAcc.........................................................................................21CC0.5010.00------------------------------------------------------------------------------------0.50---------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAAgga........................................................................................22GGA0.5010.00--------------------0.50-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAAca.........................................................................................21CA0.5010.00-------0.50--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAgt..........................................................................................20GT0.25304.75-0.25--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAttaa........................................................................................22TTAA0.25304.75-------------------------------------------0.25--------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAcca.........................................................................................21CCA0.25304.75-----------------------------------------------------------------------------------------------------------------------------------------0.25----------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAgta.........................................................................................21GTA0.25304.75-0.25--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAtctt........................................................................................22TCTT0.25304.75-------0.25--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAtat.........................................................................................21TAT0.25304.750.25---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCAttgt........................................................................................22TTGT0.25304.750.25---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............AGGACAGACAGAAGAGC................................................................................................................................................1750.200.20----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------0.20-----
...............................................................ATCCCACCTCTGCCACCgtga.........................................................................................21GTGA0.111.78-0.11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCg............................................................................................18G0.111.78----------------------------------------------------------------------------0.11-----------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCct...........................................................................................19CT0.111.78------------------------------------------------------------------------------------------------------------0.11---------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCgta..........................................................................................20GTA0.111.78----0.11-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATCCCACCTCTGCCACCgt...........................................................................................19GT0.111.78----0.11-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......GAAGCAGGACAGACAG......................................................................................................................................................16100.100.10-------------------------------------------------------------------------------------------------------------0.10--------------------------------------------------------------------------------
ACCTGAAGAAGCAGGACAGACAGAAGAGCCCCATCCTCTCCCACCTCCATACCTTTCCAGCTCATCCCACCTCTGCCACCAAAACACTCATCGCGGGGTCAGAGGGAGTGCCAAAAAAGGTAAAAAGAAACGCAAGAAAGAGGCTACTGGGGATGAGGGGACACCCAGAAGCC
..................................................((((((...((...((((...((((((.((..............)))).))))))))..))....))))))....................................................
..................................................51......................................................................123................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR040042(GSM532927)
G428N. (cervix)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR040043(GSM532928)
G428T. (cervix)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029127(GSM416756)
A549. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
GSM532877(GSM532877)
G691N. (cervix)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
GSM532875(GSM532875)
G547N. (cervix)
SRR139183(SRX050632)
FLASHPage purified small RNA (~15-40nt) from . (lung)
SRR029124(GSM416753)
HeLa. (hela)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR029128(GSM416757)
H520. (cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577579(Rovira)
total RNA. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR040013(GSM532898)
G648T. (cervix)
SRR191529(GSM715639)
131genomic small RNA (size selected RNA from . (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR139170(SRX050649)
FLASHPage purified small RNA (~15-40nt) from . (heart)
SRR189782SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR029126(GSM416755)
143B. (cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR191457(GSM715567)
27genomic small RNA (size selected RNA from t. (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR038858(GSM458541)
MEL202. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038854(GSM458537)
MM653. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR038857(GSM458540)
D20. (cell line)
SRR040032(GSM532917)
G603N. (cervix)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577744(Rovira)
total RNA. (breast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038862(GSM458545)
MM472. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR139168(SRX050648)
FLASHPage purified small RNA (~15-40nt) from . (brain)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191514(GSM715624)
165genomic small RNA (size selected RNA from . (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR191488(GSM715598)
14genomic small RNA (size selected RNA from t. (breast)
GSM532878(GSM532878)
G691T. (cervix)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR191462(GSM715572)
1genomic small RNA (size selected RNA from to. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR191480(GSM715590)
38genomic small RNA (size selected RNA from t. (breast)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR029129(GSM416758)
SW480. (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
GSM532871(GSM532871)
G652N. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)
SRR191475(GSM715585)
18genomic small RNA (size selected RNA from t. (breast)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR040006(GSM532891)
G601N. (cervix)
SRR191525(GSM715635)
121genomic small RNA (size selected RNA from . (breast)
SRR040017(GSM532902)
G645T. (cervix)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)
SRR038860(GSM458543)
MM426. (cell line)
GSM532882(GSM532882)
G696T. (cervix)
SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR038863(GSM458546)
MM603. (cell line)
SRR191521(GSM715631)
92genomic small RNA (size selected RNA from t. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR040027(GSM532912)
G220T. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532880(GSM532880)
G659T. (cervix)
GSM532874(GSM532874)
G699T. (cervix)
TAX577742(Rovira)
total RNA. (breast)
.............................cgCATCCTCTCCCACCTC.............................................................................................................................. 18cg2.000.00------------------2.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................tAAGAGCCCCATCCTCT...................................................................................................................................... 17t1.000.00----------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
...................ttAGAAGAGCCCCATCCTCT...................................................................................................................................... 20tt1.000.00-----------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................tatgGAGGGGACACCCAGA.... 19tatg1.000.00------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
.............................ttCATCCTCTCCCACCTCC............................................................................................................................. 19tt1.000.00--------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
..............................................................ctcCCCACCTCTGCCACCA............................................................................................ 19ctc1.000.00------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
acagGAAGAAGCAGGACAGA......................................................................................................................................................... 20acag1.000.00--------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
..........gaacGACAGACAGAAGAGC................................................................................................................................................ 19gaac1.000.00----------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
............................................................................................................ctaaAAAAAAGGTAAAAAGA............................................. 20ctaa1.000.00-------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
............................gaCCATCCTCTCCCACC................................................................................................................................ 17ga1.000.00-------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................aactAGAAGAGCCCCATCCTCT...................................................................................................................................... 22aact1.000.00---------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................AAAAGAAACGCAAGA.................................... 1570.140.14-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------0.14----