ID: hsa-mir-1252
chr12:79812987-79813151 +
Display Libraries
(1)
AGO2.ip
(7)
B-CELL
(15)
BRAIN
(47)
BREAST
(32)
CELL-LINE
(7)
CERVIX
(3)
FIBROBLAST
(1)
HEART
(1)
HELA
(1)
KIDNEY
(8)
LIVER
(1)
OTHER
(3)
OVARY
(25)
SKIN
(1)
SPLEEN
(1)
TESTES
(4)
UTERUS
(1)
XRN.ip
Showing top 102 reads
CATCACACAGTTGTTGAGAAATTGGTAAGTTGAGAAAAAATGTGAGGTGTAGAAAGAAGGAAATTGAATTCATTTAGAAAAGAGAATTCCAAATGAGCTTAATTTCCTTTTTTCTAAATCTTAATAATCTACCTTGCTTTTCTTCTCCTTCCACTGCACCCTTTC
..................................................(((((((((((((((((.(((((((.(((.......))).))))))).)))))))))))))))))..................................................
..................................................51..............................................................115................................................
SizePerfect hitTotal NormPerfect NormSRR189782GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR191402(GSM715512)
43genomic small RNA (size selected RNA from t. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR037935(GSM510473)
293cand3. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)
SRR037931(GSM510469)
293GFP. (cell line)
SRR189784SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR189783SRR040008(GSM532893)
G727N. (cervix)
SRR038859(GSM458542)
MM386. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR040022(GSM532907)
G575N. (cervix)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR139194(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM416733(GSM416733)
HEK293. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR040030(GSM532915)
G013N. (cervix)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM532883(GSM532883)
G871N. (cervix)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR139192(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)
SRR189786SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
SRR191555(GSM715665)
195genomic small RNA (size selected RNA from . (breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR139168(SRX050648)
FLASHPage purified small RNA (~15-40nt) from . (brain)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
TAX577588(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR139195(SRX050645)
FLASHPage purified small RNA (~15-40nt) from . (ovary)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR343336SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR191466(GSM715576)
114genomic small RNA (size selected RNA from . (breast)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR139171(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)
TAX577741(Rovira)
total RNA. (breast)
SRR191503(GSM715613)
10genomic small RNA (size selected RNA from t. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191450(GSM715560)
145genomic small RNA (size selected RNA from . (breast)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191439(GSM715549)
176genomic small RNA (size selected RNA from . (breast)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR139211(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)
SRR040006(GSM532891)
G601N. (cervix)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR139204(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
GSM359203(GSM359203)
hepg2_untreated_b. (cell line)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
TAX577738(Rovira)
total RNA. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
......................................................AGAAGGAAATTGAATTCATTT..........................................................................................211927.00927.0023.0064.0044.0051.0024.0020.0053.0046.0032.0047.0039.0037.0032.0044.0043.0040.0034.0030.0026.0011.0018.0014.007.0012.0016.007.00-6.001.006.009.005.004.004.006.002.007.001.005.004.00-1.002.005.00--1.003.004.00-1.002.002.003.00-2.00----1.00-------3.00--1.00----1.001.00---1.001.00--1.00---1.001.001.00---1.00-1.00-1.00----1.00---1.00--------1.00-----1.00--1.001.00--1.00------1.00-1.00-----1.00--1.00--------------
......................................................AGAAGGAAATTGAATTCATTTA.........................................................................................221495.00495.0020.0017.0033.0023.0029.0052.0013.0016.0014.0017.0017.0012.0017.0012.0012.0013.0015.0013.0015.0013.005.008.0012.004.001.004.00-3.00-2.002.004.004.006.00-1.001.00-1.003.005.001.001.002.007.00-2.00-2.006.003.00-1.001.001.002.001.00---3.00-3.00------3.00-1.001.00---1.00-2.00-1.001.001.00---1.001.00-1.00--1.00---1.00------------1.00-1.00-------1.00-1.00-----------------------------------------
......................................................AGAAGGAAATTGAATTCATT...........................................................................................201234.00234.00-12.006.007.0030.002.0010.003.0025.007.0011.008.009.004.003.003.004.003.003.0025.0010.004.002.001.002.001.0010.00---1.002.00-1.00-1.00-1.00-1.00-------3.00--1.00-2.001.00---4.00------2.00-2.00----------------------------------1.001.00-----------1.00---------1.00------1.00----------1.00----1.00---------------
...........................................................................................AATGAGCTTAATTTCCTTTTTT....................................................22168.0068.0036.00------1.00---------------3.00--4.003.00-3.00-------2.00--2.00-------------1.00---1.002.00---3.00--------1.002.00-----------1.00---------------------1.00--------1.00---------------------------1.00------------------
........................................................AAGGAAATTGAATTCATTTAGA.......................................................................................22159.0059.002.00--2.00-1.00----1.00--1.001.00-1.001.00----2.00--1.00--9.00---2.00-1.00---2.00--5.002.00---1.00---1.00---1.00---------1.002.00----2.00---2.00---------2.00---2.00-1.00--1.00---------1.00-1.00-------1.00-1.00--1.00------1.00--------1.001.00----------1.00----------------
...........................................................................................AATGAGCTTAATTTCCTTTTT.....................................................21118.0018.008.00----------------------1.00-----------1.00-3.00-------------1.00-------2.00---------------1.00----------------------------------1.00----------------------------------------------------
......................................................AGAAGGAAATTGAATTCAT............................................................................................19118.0018.00--1.00-2.001.00--1.00--4.002.00----2.003.00--1.001.00--------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATTTAa........................................................................................23A15.00495.00--1.00-----1.001.001.003.001.001.00-1.00-1.00----1.00--1.00--1.00----------------1.00---------------------------------------------------------------------------------------------------------------------
.........................................................................................CAAATGAGCTTAATTTCCTTTT......................................................22113.0013.008.00-------------------------------1.00-1.00--1.00-------1.00------------------------------------------------------------------1.00--------------------------------------------------
........................................................AAGGAAATTGAATTCATTTAG........................................................................................21113.0013.005.00-2.001.00-2.00----------------------1.00---1.00------------------1.00---------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATTTg.........................................................................................22G12.00927.00-1.00-1.00------1.00-2.00-2.00--3.00---2.00---------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................AATGAGCTTAATTTCCTTTTTTt...................................................23T9.0068.002.00------------------------------------------------------------------3.00-----------2.00---2.00-------------------------------------------------------------------------------
.......................................................GAAGGAAATTGAATTCATTTA.........................................................................................2116.006.002.00------------------------1.00-1.00--------------2.00------------------------------------------------------------------------------------------------------------------------
.........................................................................................CAAATGAGCTTAATTTCCTTTTT.....................................................2315.005.004.00--------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------
.......................................................GAAGGAAATTGAATTCATTTAG........................................................................................2215.005.002.00----------------------------------1.00--------------------------------------------------------------1.00-----------------------------1.00----------------------------------
.........................................................AGGAAATTGAATTCATTTA.........................................................................................1924.004.00------------------------1.000.50--1.001.50-------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATTa..........................................................................................21A4.00234.00----1.00---------1.00--2.00-------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................AATGAGCTTAATTTCCTTTT......................................................2014.004.001.00----------------------1.00-----------1.00--------------------------------------------------1.00----------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATTTAG........................................................................................2313.003.00----------------1.00-----------------------------1.00-------1.00------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATa...........................................................................................20A3.0018.00-----------2.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATTTAGA.......................................................................................2413.003.00-------------------------------------------------------------3.00-----------------------------------------------------------------------------------------------------
.......................................................GAAGGAAATTGAATTCATTTAt........................................................................................22T3.006.00---------------------------------------------3.00---------------------------------------------------------------------------------------------------------------------
...........................................................................................AATGAGCTTAATTTCCTTTctt....................................................22CTT3.002.00----------------------------------------------------------3.00--------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATgt..........................................................................................21GT3.0018.00---1.00---------1.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------
........................................................AAGGAAATTGAATTCATTT..........................................................................................1922.502.50-------------0.50-----------0.50--------1.00-------------------------------------------------------------------------------------------------------------------0.50------------
..........................................................................................................................AATAATCTACCTTGCacat........................19ACAT2.000.00--------------------------------------------------------2.00----------------------------------------------------------------------------------------------------------
.......................................................GAAGGAAATTGAATTCATTTAGA.......................................................................................2312.002.001.00------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATata.........................................................................................22ATA2.0018.00-----------1.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATTc..........................................................................................21C2.00234.00--1.00------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................ATGAGCTTAATTTCCTTTTT.....................................................2012.002.00--------------------------------------------------------------------------------1.00----------------------------------------------------1.00-----------------------------
.........................................................................................CAAATGAGCTTAATTTCCTTT.......................................................2112.002.001.00-----------------------------------------------------1.00------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATTTAaa.......................................................................................24AA2.00495.00-------------1.00-----------------1.00-----------------------------------------------------------------------------------------------------------------------------------
............................................................................................ATGAGCTTAATTTCCTTTTTT....................................................2112.002.00------------------2.00------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................AATGAGCTTAATTTCCTTT.......................................................1912.002.00---------------------------1.00------------------------------------------------------------------------------------------------------------1.00--------------------------
......................................................AGAAGGAAATTGAATTCATct..........................................................................................21CT2.0018.00----------1.00----------------------------------------1.00---------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATTg..........................................................................................21G2.00234.001.00-----------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................AAGGAAATTGAATTCATTTA.........................................................................................2021.501.50------0.50------------------------------------------------0.50---------------0.50-------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCA.............................................................................................1821.501.50---------------------------------------------------------------------------------------1.00---------------------------------------------------------------0.50-----------
......................................................AGAAGGAAATTGAATTCATgta.........................................................................................22GTA1.0018.00----------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATat..........................................................................................21AT1.0018.00-------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATTTta........................................................................................23TA1.00927.00--------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
.......................................................GAAGGAAATTGAATTCATTT..........................................................................................2011.001.00-----------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
...................................AAAAATGTGAGGTGTAGAAA..............................................................................................................2011.001.00------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATTca.........................................................................................22CA1.00234.00-----------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
........................................................................................CCAAATGAGCTTAATTTCCTTT.......................................................2211.001.00----------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATcatt............................................................................................19CATT1.000.00-------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................CAAATGAGCTTAATTTCCTTTTTT....................................................2411.001.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATgtt.........................................................................................22GTT1.0018.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATTTAt........................................................................................23T1.00495.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................CAAATGAGCTTAATTTCCTT........................................................2011.001.00--------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................AATGAGCTTAATTTCCTTTTTg....................................................22G1.0018.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................AATGAGCTTAATTTCCTTTTTTa...................................................23A1.0068.00--------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------
........................................................AAGGAAATTGAATTCATTTAGAt......................................................................................23T1.0059.00---------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------
......................................................AGAAGGAAATTGAATTCAa............................................................................................19A1.001.50-------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TTCTCCTTCCACTGCgtt.....18GTT1.000.00----------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
...........................................................................................AATGAGCTTAATTTCCTTTTTaa...................................................23AA1.0018.00-----------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------
...........................................................................AGAAAAGAGAATTCCAggat......................................................................20GGAT1.000.00------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
........................................................AAGGAAATTGAATTCATgtag........................................................................................21GTAG1.000.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCATTaa.........................................................................................22AA1.00234.00-------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................AGCTTAATTTCCTTTTTTa...................................................19A1.000.00-------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................AATGAGCTTAATTTCCTTTTTTtt..................................................24TT1.0068.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................GAGGTGTAGAAAGAAtgc........................................................................................................18TGC1.000.00-----------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTaatt...........................................................................................20AATT1.000.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................AAATGTGAGGTGTAGgtt..............................................................................................................18GTT1.000.00------------------------------------------------------------------------------------------------------------------------------------1.00------------------------------
.................................GAAAAAATGTGAGGTGgt..................................................................................................................18GT1.000.00------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------
..........................................................................................AAATGAGCTTAATTTCCTTTTTT....................................................2311.001.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................AATGAGCTTAATTTCCTTaac.....................................................21AAC1.000.00----------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------
............................................................................................................TTTTTCTAAATCTTAATttct....................................21TTCT1.000.00-----------------------------------------------------------------------------------------------------------------------------------------------------1.00-------------
.................................................TAGAAAGAAGGAAATTGcgtg...............................................................................................21CGTG1.000.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................CAAATGAGCTTAATTTCCTTcca.....................................................23CCA1.001.00----------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------
...........................................................................................AATGAGCTTAATTTCCTTcttt....................................................22CTTT1.000.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................TTTTTCTAAATCTTAATAATtt...................................22TT1.000.00---------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
.........................................................................................CAAATGAGCTTAATTTCCTTTa......................................................22A1.002.00--------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
...........................................................................................AATGAGCTTAATTTCCTTTTat....................................................22AT1.004.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................GAAGGAAATTGAATTCATT...........................................................................................1911.001.00------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
........................................................AAGGAAATTGAATTCATTTAGAA......................................................................................2311.001.00----------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................AATTTCCTTTTTTCTAcag..............................................19CAG1.000.00---------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------
.......................................................................................................TTCCTTTTTTCTAAAcg.............................................17CG1.000.00--------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------
........................................................AAGGAAATTGAATTCATTTgga.......................................................................................22GGA1.002.50----------------------------------------------------------------------0.50---------------------------------------------------------------------------------0.50----------
......................................................AGAAGGAAATTGAATTCATTTgta.......................................................................................24GTA1.00927.00-------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................ATGTGAGGTGTAGAAtaag...........................................................................................................19TAAG0.800.10----------------------------------------------------------------------0.30-----------------------------------------------------------------------------------0.20-0.10-0.10-0.10--
......................................................AGAAGGAAATTGAATTCcttt..........................................................................................21CTTT0.800.20------------0.40--------------------------------------0.20----------------------------------------0.20----------------------------------------------------------------------
..........................................................GGAAATTGAATTCATTTA.........................................................................................1830.670.67----------------------------------------0.67--------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCAgtta.........................................................................................22GTTA0.501.50-----0.50-------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................AAGGAAATTGAATTCATTTAta.......................................................................................22TA0.501.50-------------------------------------------------------------------------------------------0.50-----------------------------------------------------------------------
.......................................ATGTGAGGTGTAGAAta.............................................................................................................17TA0.500.10---------------------------------------------------------------------------------------------0.10---------------------------------------------------------------0.10-0.10-0.100.10
......................................................AGAAGGAAATTGAATTCAg............................................................................................19G0.501.50----------0.50--------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................AAGGAAATTGAATTCATTTga........................................................................................21GA0.502.50--0.50----------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCAat...........................................................................................20AT0.501.50-------------0.50-----------------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCActta.........................................................................................22CTTA0.501.50--------------------0.50----------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCAagt..........................................................................................21AGT0.501.50---0.50---------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................AAGGAAATTGAATTCATT...........................................................................................1830.330.33------------------------------------------------------------------------0.33------------------------------------------------------------------------------------------
.....................................AAATGTGAGGTGTAGAA...............................................................................................................1740.250.25----------0.25--------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTC..............................................................................................1750.200.20------0.20------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCctt...........................................................................................20CTT0.200.20-------0.20-----------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCg.............................................................................................18G0.200.20------------0.20------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCttt...........................................................................................20TTT0.200.20--0.20----------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................AGAAGGAAATTGAATTCtttt..........................................................................................21TTTT0.200.20---0.20---------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................ATGTGAGGTGTAGAA...............................................................................................................15100.100.10----------------------------------------------------------------------0.10--------------------------------------------------------------------------------------------
CATCACACAGTTGTTGAGAAATTGGTAAGTTGAGAAAAAATGTGAGGTGTAGAAAGAAGGAAATTGAATTCATTTAGAAAAGAGAATTCCAAATGAGCTTAATTTCCTTTTTTCTAAATCTTAATAATCTACCTTGCTTTTCTTCTCCTTCCACTGCACCCTTTC
..................................................(((((((((((((((((.(((((((.(((.......))).))))))).)))))))))))))))))..................................................
..................................................51..............................................................115................................................
SizePerfect hitTotal NormPerfect NormSRR189782GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR191402(GSM715512)
43genomic small RNA (size selected RNA from t. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR037935(GSM510473)
293cand3. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)
SRR037931(GSM510469)
293GFP. (cell line)
SRR189784SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR189783SRR040008(GSM532893)
G727N. (cervix)
SRR038859(GSM458542)
MM386. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR040022(GSM532907)
G575N. (cervix)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR139194(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM416733(GSM416733)
HEK293. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR040030(GSM532915)
G013N. (cervix)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM532883(GSM532883)
G871N. (cervix)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR139192(SRX050634)
FLASHPage purified small RNA (~15-40nt) from . (ovary)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)
SRR189786SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
SRR191555(GSM715665)
195genomic small RNA (size selected RNA from . (breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR139168(SRX050648)
FLASHPage purified small RNA (~15-40nt) from . (brain)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
TAX577588(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR139195(SRX050645)
FLASHPage purified small RNA (~15-40nt) from . (ovary)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR343336SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR191466(GSM715576)
114genomic small RNA (size selected RNA from . (breast)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR139171(SRX050637)
FLASHPage purified small RNA (~15-40nt) from . (kidney)
TAX577741(Rovira)
total RNA. (breast)
SRR191503(GSM715613)
10genomic small RNA (size selected RNA from t. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191450(GSM715560)
145genomic small RNA (size selected RNA from . (breast)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191439(GSM715549)
176genomic small RNA (size selected RNA from . (breast)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR139211(SRX050635)
FLASHPage purified small RNA (~15-40nt) from . (testes)
SRR040006(GSM532891)
G601N. (cervix)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR139204(SRX050636)
FLASHPage purified small RNA (~15-40nt) from . (spleen)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
GSM359203(GSM359203)
hepg2_untreated_b. (cell line)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
TAX577738(Rovira)
total RNA. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
............................caTGAGAAAAAATGTGAG....................................................................................................................... 18ca1.000.00------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------
.................................................................................................................................................ggCTTCCACTGCACCCT... 17gg1.000.00-------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
........................................TGTGAGGTGTAGAAAG............................................................................................................. 1620.500.50---------------------------------------------------------------------------------------------------------------------------------------------------------0.50---------
..............................................................................................................................................TTCTCCTTCCACTGCAC...... 1750.200.20-----------------------------------------------------------------------------------------------------------------------------------------------------------0.20-------