ID: uc011mzc.1_intron_4_0_chrX_153034532_f
GENE: (5)
chrX:153034482-153034666+


(2)
AGO2.ip
(8)
B-CELL
(4)
BRAIN
(4)
BREAST
(12)
CELL-LINE
(4)
CERVIX
(3)
HEART
(1)
HELA
(2)
LIVER
(3)
OTHER
(11)
SKIN
(1)
UTERUS

Sense strand
TGCTGCTGGACAGCAGTGGCAGTCACCTCTATGTCCTGACTGCCCACCAGGTGAGGGCCATCCTGGGGCTGAAGGGGCCAGCACACGCGGCCCAAGTCTCGTGCCCATTGCCTCTCTGCTCTGCTGCCCCTCCAGGTGGACCGGATACCTGTGGCAGCCTGCCCCCAGTTCCCTGACTGTGCCAG
....................................................(((((.((...((((((.((.(((((.....((((.(((....))).))))......))))))).)))))).)).))))).....................................................
..................................................51...............................................................................132...................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR343337RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189785SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR343334SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191435(GSM715545)
172genomic small RNA (size selected RNA from . (breast)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR040012(GSM532897)
G648N. (cervix)
SRR040032(GSM532917)
G603N. (cervix)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
TAX577453(Rovira)
total RNA. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR343335SRR343336SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR040016(GSM532901)
G645N. (cervix)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038860(GSM458543)
MM426. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................ATCCTGGGGCTGAAGCCG............................................................................................................186.000.00-2.002.00---2.00---------------------------------------------------
...........................................................ATCCTGGGGCTGAAGCAG............................................................................................................186.000.00----1.00-----------1.00-----1.00-------1.001.00----1.00---------------------
...........................................................ATCCTGGGGCTGAAGCAGG...........................................................................................................194.000.00-----------1.00-1.001.00--------------1.00----------------------------
..........................................................CATCCTGGGGCTGAAGCAGG...........................................................................................................2043.250.25----0.25---0.25--0.500.250.25-------------------------0.250.500.50-0.50--------------
................................................................................................................TCTCTGCTCTGCTGCCCCTCCAGAA................................................253.000.00---3.00------------------------------------------------------
...........................................................ATCCTGGGGCTGAAGAAG............................................................................................................183.000.00-----------------1.00---1.00-----------1.00------------------------
..........................................................CATCCTGGGGCTGAAGGCG............................................................................................................192.000.00------------------------1.00----------1.00----------------------
...........................................................ATCCTGGGGCTGAAGAAGG...........................................................................................................192.000.00----------1.00-1.00---------------------------------------------
..................................................GTGAGGGCCATCCTGGGG.....................................................................................................................1812.002.00-------------------1.00--------1.00-----------------------------
..........................................................CATCCTGGGGCTGAAGCAG............................................................................................................1942.000.250.25--0.75-----------------------------------0.50--------0.25--0.25------
...........................................................ATCCTGGGGCTGAAGTCG............................................................................................................182.000.00----1.00------------------1.00----------------------------------
..........................................................CATCCTGGGGCTGAAGTAG............................................................................................................1941.500.25--------0.25-----------------------------0.75--------0.25----0.25-----
....GCTGGACAGCAGTGGCAGT..................................................................................................................................................................1911.001.001.00---------------------------------------------------------
............................................................TCCTGGGGCTGAAGGAGGT..........................................................................................................191.000.00----------------------------------1.00-----------------------
.....................................................................................................................................AGGTGGACCGGATACCTGTGGCAGGC..........................261.000.001.00---------------------------------------------------------
.................................................................................................................CTCTGCTCTGCTGCCCCTCCAT..................................................221.000.00------------------1.00---------------------------------------
.....................................................................................................TGCCCATTGCCTCTCTGAGT................................................................201.000.00---------------------------1.00------------------------------
............................................................TCCTGGGGCTGAAGGGGCTAT........................................................................................................211.000.00-------------------------1.00--------------------------------
...........................................................ATCCTGGGGCTGAAGCCGG...........................................................................................................191.000.00--------------------------1.00-------------------------------
..................................................GTGAGGGCCATCCTGGGGCTGAAGGG.............................................................................................................2611.001.001.00---------------------------------------------------------
.....................GTCACCTCTATGTCCTGACTGC..............................................................................................................................................2211.001.001.00---------------------------------------------------------
...............................................................TGGGGCTGAAGGGGCCAG........................................................................................................1811.001.00-------1.00--------------------------------------------------
...TGCTGGACAGCAGTGGCAGTC.................................................................................................................................................................2111.001.001.00---------------------------------------------------------
.................................................................................................................CTCTGCTCTGCTGCCCCTC.....................................................1911.001.00-----1.00----------------------------------------------------
...........................................................ATCCTGGGGCTGAAGCCA............................................................................................................181.000.00--------1.00-------------------------------------------------
...........................................................ATCCTGGGGCTGAAGACGG...........................................................................................................191.000.00----------1.00-----------------------------------------------
...........................................................ATCCTGGGGCTGAAGGGGGGAG........................................................................................................221.000.00---------1.00------------------------------------------------
...................................................TGAGGGCCATCCTGGGGCTGAAG...............................................................................................................2311.001.00--------------------------------1.00-------------------------
......TGGACAGCAGTGGCAGGC.................................................................................................................................................................181.000.00---------------1.00------------------------------------------
...........................................................ATCCTGGGGCTGAAGAA.............................................................................................................171.000.00--------------------1.00-------------------------------------
..................................................................................................................TCTGCTCTGCTGCCCCTACGG..................................................211.000.00---------1.00------------------------------------------------
..........................................................CATCCTGGGGCTGAAGCCG............................................................................................................1940.750.25--------------------------------------------0.25--------0.250.25---
.......................................................................................................CCCATTGCCTCTCTGCT.................................................................1720.500.50------------------------------------------0.50---------------
..........................................................CATCCTGGGGCTGAAGT..............................................................................................................1740.500.25----0.25-----------------------------------0.25-----------------
..........................................................CATCCTGGGGCTGAAGACGG...........................................................................................................2040.250.25--------------------------------------------------0.25-------
..........................................................CATCCTGGGGCTGAAG...............................................................................................................1640.250.25-------------------------------------------------------0.25--
..........................................................CATCCTGGGGCTGAAGAAG............................................................................................................1940.250.25--------0.25-------------------------------------------------
..........................................................CATCCTGGGGCTGAA................................................................................................................1580.250.25--------------------------------------------0.12------------0.12
..........................................................CATCCTGGGGCTGAAGTAGG...........................................................................................................2040.250.25--------0.25-------------------------------------------------
..........................................................CATCCTGGGGCTGAAGTA.............................................................................................................1840.250.25-------------------------------------------------0.25--------
..........................................................CATCCTGGGGCTGAAGAAGG...........................................................................................................2040.250.25----------------------------------------------0.25-----------
.............................................................CCTGGGGCTGAAGGGGC...........................................................................................................1760.170.17------------0.17---------------------------------------------

Antisense strand
TGCTGCTGGACAGCAGTGGCAGTCACCTCTATGTCCTGACTGCCCACCAGGTGAGGGCCATCCTGGGGCTGAAGGGGCCAGCACACGCGGCCCAAGTCTCGTGCCCATTGCCTCTCTGCTCTGCTGCCCCTCCAGGTGGACCGGATACCTGTGGCAGCCTGCCCCCAGTTCCCTGACTGTGCCAG
....................................................(((((.((...((((((.((.(((((.....((((.(((....))).))))......))))))).)))))).)).))))).....................................................
..................................................51...............................................................................132...................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR343337RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189785SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR343334SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191435(GSM715545)
172genomic small RNA (size selected RNA from . (breast)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR040012(GSM532897)
G648N. (cervix)
SRR040032(GSM532917)
G603N. (cervix)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
TAX577453(Rovira)
total RNA. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR343335SRR343336SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR040016(GSM532901)
G645N. (cervix)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038860(GSM458543)
MM426. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
......................................................................................................................................................GTGGCAGCCTGCCCCCTAG................ 194.000.00-2.002.00-------------------------------------------------------
......................TCACCTCTATGTCCTTAAG................................................................................................................................................ 191.000.00-------1.00--------------------------------------------------
.........................................................................................................................................................GCAGCCTGCCCCCAGTTTTT............ 201.000.00-------------------------------------1.00--------------------
.........................................................................................GCCCAAGTCTCGTGCCAAGC............................................................................ 201.000.00-----1.00----------------------------------------------------
......................................................................................................................CTGGAGGGGCAGCAGAG.................................................. 1730.330.33---------------------------------------------0.33------------
.............................................................................................................CAGCAGAGCAGAGAGGC........................................................... 1780.120.12--------------------------------------------------------0.12-