ID: uc011myr.1_intron_1_0_chrX_152858192_r.3p
GENE: (4)
chrX:152858142-152858391-


(1)
AGO2.ip
(2)
BRAIN
(6)
BREAST
(9)
CELL-LINE
(4)
CERVIX
(2)
HEART
(1)
LIVER
(1)
OTHER
(7)
SKIN
(1)
XRN.ip

Sense strand
TCAGCAAGTGCGAAGGCCCTAGATGGGGTTTGCTGGAAGGCAGGGTGGGATCGGCAGGAGATGGGGCCAGCAGAAGGCCTTGGGGCTTCTTCCTGAGGGACATGGAAGCTGCTGGAGGGTTGGAGCAGGTGCTGATATGATTATGTCAGCATGAGGAGAGCAGCTGGTGGGCCTAAAGGCTGACACACGTGTCTTTGCAGTACCTGCTCCACTACCTGGTTTCCCTCCAGAACTGGCTGAACCGCCACAG
................................................................................................((((((((..(((((((.....((....))..((((((((((....))))))))))......))))))).((.((((....)))).))...)))))))).......................................................
................................................................................................97.....................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
TAX577746(Rovira)
total RNA. (breast)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR189782SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................ATGGAAGCTGCTGGA......................................................................................................................................15026.0026.0014.00-4.004.004.00---------------------------
.....................................................................................................ATGGAAGCTGCTGGAGCC...................................................................................................................................186.000.00---------1.00---1.00-1.00-1.001.001.00------------
................................................................................................................................................................................AGGCTGACACACGTGTCTTTGCAGA.................................................255.000.00-5.00------------------------------
.....................................................................................................ATGGAAGCTGCTGGAGCCAG.................................................................................................................................202.000.00-----2.00--------------------------
...........................................................................................................GCTGCTGGAGGGTTGTGG.............................................................................................................................182.000.00-------1.00-----------------1.00------
.....................................................................................................ATGGAAGCTGCTGGACCC...................................................................................................................................1802.0026.00---------1.00----1.00-----------------
.....................................................................................................ATGGAAGCTGCTGGATC....................................................................................................................................1702.0026.00------2.00-------------------------
.....................................................................................................ATGGAAGCTGCTGGAGTC...................................................................................................................................181.000.00---------------------1.00----------
...........................................................................................................................................................................................................................TTTCCCTCCAGAACTGGCTGAAC........2311.001.00------------------------1.00-------
................................CTGGAAGGCAGGGTGGTTT.......................................................................................................................................................................................................191.000.00--------1.00-----------------------
................................................................................................................TGGAGGGTTGGAGCAGTGC.......................................................................................................................191.000.00----------1.00---------------------
...........................................................................................................GCTGCTGGAGGGTTGTGTT............................................................................................................................191.000.00-------1.00------------------------
...........................................................................................CCTGAGGGACATGGAGTG.............................................................................................................................................181.000.00--------------------------1.00-----
.........................................................................................................................................................AGGAGAGCAGCTGGTGGAAG.............................................................................201.000.00-----------1.00--------------------
.......................................................AGGAGATGGGGCCAGCTGGG...............................................................................................................................................................................201.000.00----------1.00---------------------
..............................TGCTGGAAGGCAGGGAGAG.........................................................................................................................................................................................................191.000.00--------------------1.00-----------
................................................................................................................................................................................................................................CTCCAGAACTGGCTGAACCGC.....2111.001.00-----------------------1.00--------
...........................................................................................................................................................................................................................TTTCCCTCCAGAACTGGCTGAACC.......2411.001.00------------1.00-------------------
.....................................................................................................ATGGAAGCTGCTGGATCC...................................................................................................................................1801.0026.00----------------------1.00---------
......................................................................................................TGGAAGCTGCTGGAGCCAG.................................................................................................................................191.000.00-----1.00--------------------------
...........................................................................................................GCTGCTGGAGGGTTGTGGT............................................................................................................................191.000.00-----------1.00--------------------
...............................................................GGGCCAGCAGAAGGC............................................................................................................................................................................1580.620.62----------------------------0.38-0.120.12
....................................................................................................CATGGAAGCTGCTGGAACCA..................................................................................................................................2070.430.43---------------------------0.29-0.14--
....................................................................................................CATGGAAGCTGCTGGA......................................................................................................................................1670.430.43---------------------------0.43----

Antisense strand
TCAGCAAGTGCGAAGGCCCTAGATGGGGTTTGCTGGAAGGCAGGGTGGGATCGGCAGGAGATGGGGCCAGCAGAAGGCCTTGGGGCTTCTTCCTGAGGGACATGGAAGCTGCTGGAGGGTTGGAGCAGGTGCTGATATGATTATGTCAGCATGAGGAGAGCAGCTGGTGGGCCTAAAGGCTGACACACGTGTCTTTGCAGTACCTGCTCCACTACCTGGTTTCCCTCCAGAACTGGCTGAACCGCCACAG
................................................................................................((((((((..(((((((.....((....))..((((((((((....))))))))))......))))))).((.((((....)))).))...)))))))).......................................................
................................................................................................97.....................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
TAX577746(Rovira)
total RNA. (breast)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR189782SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
......................................GGCAGGGTGGGATCGACCA................................................................................................................................................................................................. 191.000.00--------1.00-----------------------
....................................................................................................................................TGATATGATTATGTCATAAC.................................................................................................. 201.000.00----------------1.00---------------