ID: uc011mxe.1_intron_5_0_chrX_148582569_r.3p
GENE: (3)
chrX:148582519-148582768-


(4)
BREAST 		(9)
CELL-LINE 		(2)
CERVIX 		(2)
HEART 		(1)
KIDNEY 		(2)
LIVER 		(2)
OTHER 		(6)
SKIN 		(1)
UTERUS

Sense strand
GCTTAGGGACCAGGAAGTCAGATGCTTAGTTCTCAAATAGAAACTAGAGAGTTTGGCTTTAGAGGGGACTTTTGTAGATGAGGAAACTGAGCCCCAAAGAAGGGAGGTTCCACTTGCCCATTTGTTTACAGAGTTTTAATTATGGGGAGTGGGGTGTTGAAAGACTCATCATGTTTTAACAACCTTTTTTTTTTTCCAAGGGATATCTTCTAACCATACCGATGATTCTCCGTATAGCTGGTCTTTTCCA
.....................................................................((((((((((((((.....(((((((.......)).)))))......))...)))))))))))).........(((..((.((((((((((..(((.......))))))))).)))).....))..)))....................................................
....................................................................69.................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784TAX577588(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343336SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR040039(GSM532924)
G531T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
...................................................................................................................................................................................CAACCTTTTTTTTTTTCTTTA..................................................2142.000.0026.0015.00-------------------1.00-------
...................................................................................................................................................................................CAACCTTTTTTTTTTTACTT...................................................204.000.00--2.002.00-------------------------
...................................................................................................................................................................................CAACCTTTTTTTTTTTCTAAG..................................................213.000.00-2.00---1.00-----------------------
........ACCAGGAAGTCAGATGCTTAGTT...........................................................................................................................................................................................................................2313.003.00----3.00------------------------
...................................................................................................................................................................................CAACCTTTTTTTTTTTCTAAT..................................................212.000.00-1.00-1.00-------------------------
.........................................................................GTAGATGAGGAAACTGAGCCCCA..........................................................................................................................................................2311.001.00-----------1.00-----------------
..........................................................TTAGAGGGGACTTTTGTAGATGAGGA......................................................................................................................................................................2611.001.00------------------------1.00----
..............................................................AGGGGACTTTTGTAGATGAGG.......................................................................................................................................................................2111.001.00-------1.00---------------------
...................................................................................................................................................................................CAACCTTTTTTTTTTTCATTA..................................................211.000.001.00----------------------------
...............................................................................................................................................................................................................TTCTAACCATACCGATGATTCTCCGTAT...............2811.001.00--------------1.00--------------
......................................................................TTTGTAGATGAGGAAACTGAGCCCCA..........................................................................................................................................................2611.001.00-----------------------1.00-----
...........................................CTAGAGAGTTTGGCTTTAGAGGGGACTTTTGT...............................................................................................................................................................................3211.001.00----------1.00------------------
...........................................................................................................................................................................................................................CGATGATTCTCCGTATAG.............1811.001.00----------------------------1.00
.........................................................................................................................................................................................................GATATCTTCTAACCATACCGATGA.........................2411.001.00--------1.00--------------------
...................................................................................................................................................................................CAACCTTTTTTTTTTTCCAACAAG...............................................241.000.00-1.00---------------------------
........................................................................................................................................................GGTGTTGAAAGACTCATCAT..............................................................................2011.001.00--------------------1.00--------
...................................................................................................................................................................................CAACCTTTTTTTTTTTCAAC...................................................201.000.00--1.00--------------------------
...................................................................................................................................................................................CAACCTTTTTTTTTTTATCT...................................................201.000.00--1.00--------------------------
............................................................................................................................................................................................................................GATGATTCTCCGTAT...............1511.001.00------1.00----------------------
.....................................................TGGCTTTAGAGGGGACTTTTG................................................................................................................................................................................2111.001.00--------------------------1.00--
.................................................................................................................................................................................AACAACCTTTTTTTTTTTCCAACTG................................................251.000.001.00----------------------------
.......................................................................................................................................................................................CTTTTTTTTTTTCCAAGGGGGAG............................................231.000.00-1.00---------------------------
.............................................................................ATGAGGAAACTGAGCCC............................................................................................................................................................1701.001.00---------------1.00-------------
....................................................................................AACTGAGCCCCAAAGAAGGG..................................................................................................................................................2011.001.00-------1.00---------------------
..................................................................................................................................................................................ACAACCTTTTTTTTTTTCATT...................................................211.000.00--1.00--------------------------
.....................................................................................................................................................................................ACCTTTTTTTTTTTCCATACA................................................211.000.00-1.00---------------------------
...................................................................................................................................................................................CAACCTTTTTTTTTTTATAG...................................................201.000.00-1.00---------------------------
...................................................................................................................................................................................CAACCTTTTTTTTTTTATG....................................................191.000.00-1.00---------------------------
................................................................................................................................................................................................................TCTAACCATACCGATGATTCTCCGTA................2611.001.00-----------------1.00-----------
...................................................................................................................................................................................CAACCTTTTTTTTTTTCTTAA..................................................211.000.00-1.00---------------------------
...............................................................................................................................................................................TTAACAACCTTTTTTTTTG........................................................191.000.00---------1.00-------------------
...................................................................................................................................................................................................................AACCATACCGATGATTCTCCGTA................2311.001.00----------------------1.00------
........................................................................................................................................................................................TTTTTTTTTTTCCAAGGGTATA............................................221.000.00----------------1.00------------
...................................................................................................................................................................................................................AACCATACCGATGATTCTCC...................2011.001.00-------------------------1.00---
...................................................................................................................................................................................CAACCTTTTTTTTTTTCTTAG..................................................211.000.001.00----------------------------
.................................................................................................................................................................................................................CTAACCATACCGATGATTCTCCGT.................2411.001.00---------------------------1.00-
......................................................................................................................................................................................CCTTTTTTTTTTTCCACTTG................................................201.000.00-----1.00-----------------------
..............................................................................................................................................................................................................CTTCTAACCATACCGATGAT........................2011.001.00------------1.00----------------
...................................................................................................................................................................................CAACCTTTTTTTTTTTCAAG...................................................201.000.00-1.00---------------------------
.........CCAGGAAGTCAGATGCTTAGTTCTCAAAT....................................................................................................................................................................................................................2911.001.00-------------------1.00---------
...................................................................................................................................................................................CAACCTTTTTTTTTTTCACTT..................................................211.000.00--1.00--------------------------
...................................................................................................................................................................................CAACCTTTTTTTTTTTCTTTG..................................................211.000.00-1.00---------------------------
...................................................................................................................................................................................CAACCTTTTTTTTTTTCTTA...................................................201.000.001.00----------------------------
........................................................................................................................................................................................................................................TATAGCTGGTCTTTTCCTCTG211.000.00------1.00----------------------
............................................TAGAGAGTTTGGCTTTCACC..........................................................................................................................................................................................201.000.00-------------1.00---------------
...................................................................................................................................................................................CAACCTTTTTTTTTTTGTAG...................................................201.000.00-1.00---------------------------
.....................................................................................................................................................................................ACCTTTTTTTTTTTCCAAG..................................................1930.330.33---0.33-------------------------
......................................................................................................................................................................................CCTTTTTTTTTTTCCAAG..................................................1890.220.22---0.11-0.11-----------------------

Antisense strand
GCTTAGGGACCAGGAAGTCAGATGCTTAGTTCTCAAATAGAAACTAGAGAGTTTGGCTTTAGAGGGGACTTTTGTAGATGAGGAAACTGAGCCCCAAAGAAGGGAGGTTCCACTTGCCCATTTGTTTACAGAGTTTTAATTATGGGGAGTGGGGTGTTGAAAGACTCATCATGTTTTAACAACCTTTTTTTTTTTCCAAGGGATATCTTCTAACCATACCGATGATTCTCCGTATAGCTGGTCTTTTCCA
.....................................................................((((((((((((((.....(((((((.......)).)))))......))...)))))))))))).........(((..((.((((((((((..(((.......))))))))).)))).....))..)))....................................................
....................................................................69.................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784TAX577588(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343336SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR040039(GSM532924)
G531T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
..................................AAATAGAAACTAGAGCAGC..................................................................................................................................................................................................... 191.000.00------------------1.00----------