ID: uc011mut.1_intron_2_0_chrX_129480666_f.3p
GENE: (3)
chrX:129483025-129483274+


(1)
BREAST
(8)
CELL-LINE
(3)
HEART
(1)
OTHER
(6)
SKIN

Sense strand
TTCAGTTCTTTTAAATTTGTTGAGGTTGGTTTTATGACCCAGAATGTTCAGTTTCTTGCTGAGTGTTTCATGAGTGCTTGAAAAAAATCATATTCTGCTGTTGTTGGGTAGAATGAGATGGGTAGTCCAAATAAGTAGGCTATCTAGATATGTATAATCTGAAAATGTTGAGAATAACTTTTTACTTTTTTTTTTTTCAGAATTGCTCCTGCGTTGCTAAGACAAGCATCATATGGCACCATTAAAATTG
..............................................................................................(((((.......))))).......(((((((((..........))))))))).....(((...((((((((....((((.(((....))).))))....))))))))..)))............................................
..............................................................................................95..............................................................................................................207.........................................
SizePerfect hitTotal NormPerfect NormSRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR189782SRR189785SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
TAX577740(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
...................................................................................................................................................................................TTTTACTTTTTTTTTTTTCAAAAG...............................................24116.000.0060.0034.0016.003.00-3.00-----------------
....................................................................................................................................................................................TTTACTTTTTTTTTTTTCAAAAG...............................................2310.000.006.003.00---1.00-----------------
...................................................................................................GTTGTTGGGTAGAATTCTG....................................................................................................................................198.000.00----------1.002.001.00-1.001.00---1.00-1.00-
.................................................................................................................................................................................CTTTTTACTTTTTTTTTTTTAAG..................................................236.000.001.00--3.00-2.00-----------------
..................................................................................................................................................................................TTTTTACTTTTTTTTTTTTCCCG.................................................235.000.001.00--2.00-2.00-----------------
.....................................................................................................................................................................................TTACTTTTTTTTTTTTCACAG................................................215.000.00-5.00---------------------
................................................................................................................................................................................ACTTTTTACTTTTTTTTTTTTCTTG.................................................253.000.00-1.00-2.00-------------------
.................................................................................................................................................................................CTTTTTACTTTTTTTTTTCTTG...................................................223.000.001.00--2.00-------------------
......................................................................................................................................................................................TACTTTTTTTTTTTTCACAG................................................202.000.001.00--------1.00-------------
.....................................................................................................................................................................................TTACTTTTTTTTTTTTCGG..................................................192.000.00------1.00---------1.00------
..................................................................................................................................................................................TTTTTACTTTTTTTTTTTATTG..................................................222.000.00--1.001.00-------------------
.....................................................................................................................................................................................TTACTTTTTTTTTTTTCAAAAG...............................................222.000.002.00----------------------
...................................................................................................................................................................................TTTTACTTTTTTTTTTTTCTTAG................................................231.000.00-1.00---------------------
...................................................................................................................................................................................TTTTACTTTTTTTTTTTTCAAAGG...............................................241.000.00-1.00---------------------
...................................................................................................................................................................................TTTTACTTTTTTTTTTTTCAAAA................................................231.000.00--1.00--------------------
.....................................................................................................................................................................................TTACTTTTTTTTTTTTCATTG................................................211.000.00-1.00---------------------
......................................................................................................................................................................................TACTTTTTTTTTTTTCAACTG...............................................211.000.001.00----------------------
......................................................................................................................................................................................TACTTTTTTTTTTTTCAAACG...............................................211.000.00-----1.00-----------------
......................................................................................................................................................................................TACTTTTTTTTTTTTCGTTG................................................201.000.00------------------1.00----
...................................................................................................................................................................................TTTTACTTTTTTTTTTTTCAAAAA...............................................241.000.00-----1.00-----------------
...................................................................................................................................................................................TTTTACTTTTTTTTTTTTCATTAG...............................................241.000.00--1.00--------------------
...............................................................................................................................................................................AACTTTTTACTTTTTTTTTTTTTTAG.................................................261.000.00----1.00------------------
...................................................................................................................................................................................TTTTACTTTTTTTTTTTTCGGT.................................................221.000.00----1.00------------------
....................................................................................................................................................................................TTTACTTTTTTTTTTTTCATTTT...............................................231.000.00------1.00----------------
................................................................................................................................................................................ACTTTTTACTTTTTTTTTAG......................................................201.000.00-----1.00-----------------
............................................................................................................................................................................AATAACTTTTTACTTTTTTTTTTTCAG...................................................271.000.00---1.00-------------------
...........................................................................................................GTAGAATGAGATGGGTAGTCCTCTG......................................................................................................................251.000.00--------------------1.00--
....................................................................................................................................................................................TTTACTTTTTTTTTTTTCGCT.................................................211.000.00----1.00------------------
................................................................................................................................................................................ACTTTTTACTTTTTTTTTTTCTTG..................................................241.000.00---1.00-------------------
................................................................................................................................................................................ACTTTTTACTTTTTTTTTTTTTTTC.................................................251.000.00----1.00------------------
.................................................................................................................................................................................CTTTTTACTTTTTTTTTTTCCAG..................................................231.000.00--------1.00--------------
.................................................................................................................................................................................CTTTTTACTTTTTTTTTTTCCG...................................................221.000.00-1.00---------------------
.....................................................................................................................................................................................TTACTTTTTTTTTTTTCATGTG...............................................221.000.00-1.00---------------------
...................................................................................................................................................................................TTTTACTTTTTTTTTTTTCATAAG...............................................241.000.001.00----------------------
....................................................................................................................................................................................TTTACTTTTTTTTTTTTCGG..................................................201.000.00----1.00------------------
......................................................................................................................................................................................TACTTTTTTTTTTTTCGGG.................................................191.000.00----1.00------------------
...............................................................................................................................................................................AACTTTTTACTTTTTTTTTTTTTTTG.................................................261.000.00-----1.00-----------------
................................................................................................................................................................................ACTTTTTACTTTTTTTTTTTTCCTCC................................................261.000.00----1.00------------------
...................................................................................................................................................................................TTTTACTTTTTTTTTTTTCGGAG................................................231.000.00------1.00----------------
...................................................................................................................................................................................TTTTACTTTTTTTTTTTTCGGC.................................................221.000.00----1.00------------------
................................................................................................................................................................................ACTTTTTACTTTTTTTTTTTTTTAG.................................................251.000.00----1.00------------------
................................................................................................................................................................................ACTTTTTACTTTTTTCGAC.......................................................191.000.00----1.00------------------
................................................................................................................................................................................ACTTTTTACTTTTTTTTTTCGTG...................................................231.000.00------1.00----------------
.................................................................................................................................................................................CTTTTTACTTTTTTTTTTGTTC...................................................221.000.00--------1.00--------------
....................................................................................................................................................................................TTTACTTTTTTTTTTTTCCTGC................................................221.000.00------1.00----------------
...............................................................................................TGCTGTTGTTGGGTAGAATACTG....................................................................................................................................231.000.00----------1.00------------
....................................................................................................................................................................................TTTACTTTTTTTTTTTTCAGGA................................................221.000.00----1.00------------------
..............................................................................................................................................................................TAACTTTTTACTTTTTTTTTTCGA....................................................241.000.00--1.00--------------------
....................................................................................................................................................................................TTTACTTTTTTTTTTTTCCTTG................................................221.000.00-----1.00-----------------
...............................................................................................TGCTGTTGTTGGGTAGAATGCTG....................................................................................................................................231.000.00-------------1.00---------
..................................................................................................................................................................................TTTTTACTTTTTTTTTTTTCAAAG................................................241.000.001.00----------------------
.....................................................................................................................................................................................TTACTTTTTTTTTTTTCGAA.................................................201.000.00----1.00------------------
...................................................................................................................................................................................TTTTACTTTTTTTTTTTTCACAG................................................231.000.00-1.00---------------------
..................................................................................................................................................................................TTTTTACTTTTTTTTTTTTCTTGG................................................241.000.00----1.00------------------
................................................................................................................................................................................ACTTTTTACTTTTTTTTTGAG.....................................................211.000.00----1.00------------------
...................................................................................................................................................................................TTTTACTTTTTTTTTTTTCACAAG...............................................241.000.00-----1.00-----------------
.................................................................................................................................................................................CTTTTTACTTTTTTTTTTTTC....................................................2120.500.50---0.50-------------------
...................................................................................................................................................ATATGTATAATCTGAAAATGTT.................................................................................2220.500.50------------0.50----------
.........................................................................................................................................................................................................................................TGGCACCATTAAAATTG1720.500.50---------0.50-------------
.............................................................................................................................TCCAAATAAGTAGGC..............................................................................................................1560.170.17----------------------0.17

Antisense strand
TTCAGTTCTTTTAAATTTGTTGAGGTTGGTTTTATGACCCAGAATGTTCAGTTTCTTGCTGAGTGTTTCATGAGTGCTTGAAAAAAATCATATTCTGCTGTTGTTGGGTAGAATGAGATGGGTAGTCCAAATAAGTAGGCTATCTAGATATGTATAATCTGAAAATGTTGAGAATAACTTTTTACTTTTTTTTTTTTCAGAATTGCTCCTGCGTTGCTAAGACAAGCATCATATGGCACCATTAAAATTG
..............................................................................................(((((.......))))).......(((((((((..........))))))))).....(((...((((((((....((((.(((....))).))))....))))))))..)))............................................
..............................................................................................95..............................................................................................................207.........................................
SizePerfect hitTotal NormPerfect NormSRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR189782SRR189785SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
TAX577740(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
......................................................................TGAGTGCTTGAAAAAAACTT................................................................................................................................................................ 202.000.00-------2.00---------------
...................................GACCCAGAATGTTCAGCG..................................................................................................................................................................................................... 181.000.00--------1.00--------------
..............................................................................................CTGCTGTTGTTGGGTTACT......................................................................................................................................... 191.000.00--1.00--------------------
.............................................GTTCAGTTTCTTGCTGTAT.......................................................................................................................................................................................... 191.000.00-----------------1.00-----
......................................................................TGAGTGCTTGAAAAAAACT................................................................................................................................................................. 191.000.00-------1.00---------------
.............................................................................................................AGAATGAGATGGGTACCCA.......................................................................................................................... 191.000.00----1.00------------------
......................................................................TGAGTGCTTGAAAAAACTTG................................................................................................................................................................ 201.000.00---------1.00-------------
.................................GAACATTCTGGGTCAT......................................................................................................................................................................................................... 1630.330.330.33----------------------