| (1) AGO1.ip OTHER.mut | (4) B-CELL | (1) BRAIN | (6) BREAST | (12) CELL-LINE | (11) CERVIX | (4) HEART | (2) LIVER | (2) OTHER | (1) RRP40.ip | (11) SKIN | (2) UTERUS | (1) XRN.ip |
| GGCTGTGGTCTGAAGTCAAGCCGAGCCTCTTGGCCTCACTGGCCTGTAATGTAAGCAGCATTTCTGAAGGAGCAGACTAGCTGAGAAGTAGGTTTCTAGGACTGAGATGAAAGGTATCTGCCTGGGGCTGGAAACTTGTGGGGGAAGTTTCTGAGGGGCAAAGAGCAGCAGGACCACATCAGCCCCTAATTCCACCCCAGGGACCGCTATCCACGCATTGGAGACATCCTGCAGAAACTGGCCCCCTTCC ...............................................................................................(((((....(((((.....))))).))))).((.((((((((.......)))))))).....((.....)).))................................................................................. ............................................................................................93...............................................................................174.......................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR191590(GSM715700) 48genomic small RNA (size selected RNA from t. (breast) | SRR060984(GSM569188) Human plasma cell [09-001]. (cell line) | SRR444061(SRX128909) Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin) | SRR444045(SRX128893) Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin) | SRR444042(SRX128890) Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR033728(GSM497073) MALT (MALT413). (B cell) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | SRR444044(SRX128892) Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin) | SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin) | SRR390724(GSM850203) small rna immunoprecipitated. (cell line) | SRR040018(GSM532903) G701N. (cervix) | GSM450606(GSM450606) miRNA sequencing raw reads from post-mortem s. (brain) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR037936(GSM510474) 293cand1. (cell line) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | TAX577588(Rovira) total RNA. (breast) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | SRR191599(GSM715709) 89genomic small RNA (size selected RNA from t. (breast) | SRR444065(SRX128913) Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line) | SRR040028(GSM532913) G026N. (cervix) | SRR189783 | SRR060985(GSM569189) Human naive B cell [09-001]. (cell line) | SRR191630(GSM715740) 70genomic small RNA (size selected RNA from t. (breast) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR444055(SRX128903) Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin) | SRR040036(GSM532921) G243N. (cervix) | SRR444049(SRX128897) Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin) | SRR015358(GSM380323) NaÌøve B Cell (Naive39). (B cell) | SRR040031(GSM532916) G013T. (cervix) | SRR040008(GSM532893) G727N. (cervix) | SRR039612(GSM531975) Human Normal Liver Tissue Sample 2. (liver) | SRR040025(GSM532910) G613T. (cervix) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line) | SRR191548(GSM715658) 101genomic small RNA (size selected RNA from . (breast) | SRR444047(SRX128895) Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin) | SRR040033(GSM532918) G603T. (cervix) | SRR444060(SRX128908) Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | SRR015365(GSM380330) Memory B cells (MM139). (B cell) | SRR040032(GSM532917) G603N. (cervix) | GSM532887(GSM532887) G761N. (cervix) | SRR040024(GSM532909) G613N. (cervix) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | SRR040035(GSM532920) G001T. (cervix) | SRR033729(GSM497074) splenic MZL (Splenic414). (B cell) | SRR191550(GSM715660) 27genomic small RNA (size selected RNA from t. (breast) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................................TGAGGGGCAAAGAGCGAGA................................................................................ | 19 | 44.00 | 0.00 | 2.00 | 3.00 | 2.00 | 1.00 | 2.00 | - | 1.00 | 2.00 | - | 2.00 | 2.00 | 1.00 | 2.00 | - | - | 1.00 | - | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | 1.00 | 1.00 | - | 1.00 | 1.00 | 1.00 | 1.00 | - | 1.00 | - | 1.00 | 1.00 | 1.00 | - | 1.00 | - | - | 1.00 | 1.00 | - | - | - | |
| .......................................................................................................................................................TGAGGGGCAAAGAGCGAG................................................................................. | 18 | 8.00 | 0.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................TGAGGGGCAAAGAGCGAGC................................................................................ | 19 | 2.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................AGCAGCAGGACCACAGGCG.................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AAGCAGCATTTCTGAAGGAGCAGACTAGCT........................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................GAGACATCCTGCAGAAACTGGCCCC..... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................AGGACTGAGATGAAACGG....................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................TCCTGCAGAAACTGGCCAAT.... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................CATTGGAGACATCCTGCAGAAACT........... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................AAAGAGCAGCAGGACTTG......................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................TGAGGGGCAAAGAGCGAGG................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................AAAGAGCAGCAGGACCACTAT...................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................TGTGGGGGAAGTTTCGC................................................................................................. | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................................TGCAGAAACTGGCCCCCT... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................TGTAATGTAAGCAGC............................................................................................................................................................................................... | 15 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 |
| GGCTGTGGTCTGAAGTCAAGCCGAGCCTCTTGGCCTCACTGGCCTGTAATGTAAGCAGCATTTCTGAAGGAGCAGACTAGCTGAGAAGTAGGTTTCTAGGACTGAGATGAAAGGTATCTGCCTGGGGCTGGAAACTTGTGGGGGAAGTTTCTGAGGGGCAAAGAGCAGCAGGACCACATCAGCCCCTAATTCCACCCCAGGGACCGCTATCCACGCATTGGAGACATCCTGCAGAAACTGGCCCCCTTCC ...............................................................................................(((((....(((((.....))))).))))).((.((((((((.......)))))))).....((.....)).))................................................................................. ............................................................................................93...............................................................................174.......................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR191590(GSM715700) 48genomic small RNA (size selected RNA from t. (breast) | SRR060984(GSM569188) Human plasma cell [09-001]. (cell line) | SRR444061(SRX128909) Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin) | SRR444045(SRX128893) Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin) | SRR444042(SRX128890) Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR033728(GSM497073) MALT (MALT413). (B cell) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | SRR444044(SRX128892) Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin) | SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin) | SRR390724(GSM850203) small rna immunoprecipitated. (cell line) | SRR040018(GSM532903) G701N. (cervix) | GSM450606(GSM450606) miRNA sequencing raw reads from post-mortem s. (brain) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR037936(GSM510474) 293cand1. (cell line) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | TAX577588(Rovira) total RNA. (breast) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | SRR191599(GSM715709) 89genomic small RNA (size selected RNA from t. (breast) | SRR444065(SRX128913) Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line) | SRR040028(GSM532913) G026N. (cervix) | SRR189783 | SRR060985(GSM569189) Human naive B cell [09-001]. (cell line) | SRR191630(GSM715740) 70genomic small RNA (size selected RNA from t. (breast) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR444055(SRX128903) Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin) | SRR040036(GSM532921) G243N. (cervix) | SRR444049(SRX128897) Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin) | SRR015358(GSM380323) NaÌøve B Cell (Naive39). (B cell) | SRR040031(GSM532916) G013T. (cervix) | SRR040008(GSM532893) G727N. (cervix) | SRR039612(GSM531975) Human Normal Liver Tissue Sample 2. (liver) | SRR040025(GSM532910) G613T. (cervix) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line) | SRR191548(GSM715658) 101genomic small RNA (size selected RNA from . (breast) | SRR444047(SRX128895) Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin) | SRR040033(GSM532918) G603T. (cervix) | SRR444060(SRX128908) Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | SRR015365(GSM380330) Memory B cells (MM139). (B cell) | SRR040032(GSM532917) G603N. (cervix) | GSM532887(GSM532887) G761N. (cervix) | SRR040024(GSM532909) G613N. (cervix) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR342898(SRX096794) small RNA seq of Right atrial tissue. (heart) | SRR040035(GSM532920) G001T. (cervix) | SRR033729(GSM497074) splenic MZL (Splenic414). (B cell) | SRR191550(GSM715660) 27genomic small RNA (size selected RNA from t. (breast) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................................CAGGACCACATCAGCT.................................................................. | 16 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CATCAGCCCCTAATTGGA........................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ..............................................................................................................AAGGTATCTGCCTGGGGCTGGAAACTCC................................................................................................................ | 28 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................CCCCTCAGAAACTTCCC............................................................................................ | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ....................................................................................................................................................................................................................................GGGCCAGTTTCTGCAG...... | 16 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - |