ID: uc011mep.1_intron_1_0_chr9_139982636_f.5p
GENE: (2)
chr9:139982586-139982835+


(1)
AGO2.ip 		(3)
B-CELL 		(1)
BRAIN 		(2)
BREAST 		(13)
CELL-LINE 		(2)
CERVIX 		(2)
HELA 		(2)
LIVER 		(13)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
GCTTTTCTGTGGACTCCTCTTCTACATCAACTTGGCTGACCATTGGAAAGGTATCAGAAACACGTGTACTTGAAAACGATATCTGTGTTGAGGGTTGATTGGGCAGAAGCAATCTTGCATTCTACCTTAAACAGCTCCAGGAGGCATATATGGCAACGAATTGGCAAGAAATCAAGATAAAGAGAAAGGTAGAGCTGTATGTAACCACCTGGCTAGAACACAGATGTTAATTTGATGCTGTCTGACTACT
..........................................................................................(((((.((....((((........))))..)).)))))..(((((((......((.....((....)).....))......((........))........)))))))....................................................
.................................................................................82....................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM339994(GSM339994)
hues6. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
......................................................................................GTTGAGGGTTGATTGCAA..................................................................................................................................................1819.000.0010.008.001.00--------------------------------------
..................................................GTATCAGAAACACGTGTACTTGAAAACGATATCTGTGTTGAGGGTTGATTGGGCAGAAGCAATCTTGCATTCTACCTTAAACAG....................................................................................................................8417.007.00---7.00-------------------------------------
......................................................................................GTTGAGGGTTGATTGAAA..................................................................................................................................................186.000.00--4.00-------2.00------------------------------
......................................................................................GTTGAGGGTTGATTGCT...................................................................................................................................................175.000.00----2.00-2.00----------1.00-----------------------
......................................................................................GTTGAGGGTTGATTGCTG..................................................................................................................................................184.000.00--1.00-----1.00----------1.00-----1.00---------------
......................................................................................GTTGAGGGTTGATTGCTAA.................................................................................................................................................193.000.00--2.00------------------1.00-------------------
......................................................................................GTTGAGGGTTGATTGCA...................................................................................................................................................173.000.00-------1.00-1.00--------------------------1.00----
......................................................................................GTTGAGGGTTGATTGCTGT.................................................................................................................................................193.000.00-----1.00-----------------------------1.00-1.00---
......................................................................................GTTGAGGGTTGATTGAA...................................................................................................................................................173.000.00-------1.00---------------1.00--------1.00--------
......................................................................................GTTGAGGGTTGATTGCTA..................................................................................................................................................182.000.00--------1.00------1.00-------------------------
......................................................................................GTTGAGGGTTGATTGAAAA.................................................................................................................................................192.000.00-----1.00---------------------1.00-------------
................CTCTTCTACATCAACTTGGCTGACCATTGGAAAG........................................................................................................................................................................................................3411.001.00------------------------------1.00----------
...........................................................................................................................................................................................................................ACAGATGTTAATTTGATG.............1811.001.00---------1.00-------------------------------
.........................................................................................................................................................................AATCAAGATAAAGAGAAAGGTAGAGCT......................................................2711.001.00---------------------------------1.00-------
..................................................................................................................................................................................AAAGAGAAAGGTAGAGCTGTATG.................................................2311.001.00-----------1.00-----------------------------
...................................................................................................................................................................................................TGTATGTAACCACCTGGCTAGAAC...............................2411.001.00----------------------1.00------------------
.........................................................................................................................................................................................AAGGTAGAGCTGTATGTA...............................................1811.001.00--------------1.00--------------------------
..............................................................................................................................................................................................................ACCTGGCTAGAACACAGATGT.......................2111.001.00------------------1.00----------------------
................................................................................................................................AAACAGCTCCAGGAGGCACAT.....................................................................................................211.000.00----------------------------1.00------------
....................................................................................................................................................................................AGAGAAAGGTAGAGCTGTA...................................................1911.001.00--------------------------1.00--------------
...................................................................ACTTGAAAACGATATCTGTGT..................................................................................................................................................................2111.001.00--------------------1.00--------------------
...........................................................................................................................................................................................................ACCACCTGGCTAGAACACAGATGTTAATTT.................3011.001.00-----------------------------1.00-----------
..........................................................................................AGGGTTGATTGGGCAGAAGCA...........................................................................................................................................2111.001.00------------1.00----------------------------
............................................GGAAAGGTATCAGAAATA............................................................................................................................................................................................181.000.00------------1.00----------------------------
.................................................................................TCTGTGTTGAGGGTTGATTGG....................................................................................................................................................2111.001.00-----------1.00-----------------------------
.........TGGACTCCTCTTCTACATCAACTTGGCTGACCA................................................................................................................................................................................................................3311.001.00-------------1.00---------------------------
......................................................................................GTTGAGGGTTGATTGGGCA.................................................................................................................................................1911.001.00----------------------------------1.00------
...........................................................ACACGTGTACTTGAAAACGATATCTGTG...................................................................................................................................................................2811.001.00------------------------1.00----------------
...............................TTGGCTGACCATTGGAAAGGT......................................................................................................................................................................................................2111.001.00----------------1.00------------------------
.................................................................................................................................................................................................................TGGCTAGAACACAGATGTTAATTTGATGC............2911.001.00-------------------------------1.00---------
.....................................................................................................................................................................................................................................ATTTGATGCTGTCTGAC....1720.500.50--------------------------------------0.50--

Antisense strand
GCTTTTCTGTGGACTCCTCTTCTACATCAACTTGGCTGACCATTGGAAAGGTATCAGAAACACGTGTACTTGAAAACGATATCTGTGTTGAGGGTTGATTGGGCAGAAGCAATCTTGCATTCTACCTTAAACAGCTCCAGGAGGCATATATGGCAACGAATTGGCAAGAAATCAAGATAAAGAGAAAGGTAGAGCTGTATGTAACCACCTGGCTAGAACACAGATGTTAATTTGATGCTGTCTGACTACT
..........................................................................................(((((.((....((((........))))..)).)))))..(((((((......((.....((....)).....))......((........))........)))))))....................................................
.................................................................................82....................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM339994(GSM339994)
hues6. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.............................................................................................................................................................................................................TGTTCTAGCCAGGTG.............................. 1590.110.11----------------------------------------0.11