ID: uc011mbg.9
GENE: SPTAN1(10)
chr9:131343001-131343250+


(1)
AGO1.ip 		(5)
AGO2.ip 		(5)
B-CELL 		(13)
BRAIN 		(19)
BREAST 		(31)
CELL-LINE 		(6)
CERVIX 		(3)
FIBROBLAST 		(7)
HEART 		(6)
HELA 		(4)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(40)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
TTCTAGATTAATTAAAACAGGCCATCCCTTTTATATTGAACATGCACATACAAGTGAATGTTGTTTTTCCCCTTTTGCAAATCGGAAAAAAGGCCTGAAGATTAGCACTAGGATTAGGAATTCCAGGATAGCTGTTCTGTCTGCCTCGGAGGCATTGGGGCTGACCTCATCTCCCTGACCATGTCTCCTATGCCCCCAAGCTGACCGTCCTTTCCGAGGAGAGAGCGGCGCTGCTGGAGCTGTGGGAGCT
...................................................................................................................................................((.(((((.(((((.....(((......)))....))).)).))))).)).....................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189782SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040018(GSM532903)
G701N. (cervix)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR038854(GSM458537)
MM653. (cell line)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR029126(GSM416755)
143B. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR189786SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189787SRR189783SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR191427(GSM715537)
153genomic small RNA (size selected RNA from . (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		TAX577739(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR040014(GSM532899)
G623N. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040033(GSM532918)
G603T. (cervix)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040032(GSM532917)
G603N. (cervix)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR029131(GSM416760)
MCF7. (cell line)		SRR038853(GSM458536)
MELB. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
.................................................................................................................................................TCGGAGGCATTGGGGCTGACC....................................................................................21155.0055.0016.002.003.001.001.003.001.001.001.002.00------2.00-2.00-1.00-----2.00---1.001.001.00---1.001.00-----1.001.00-1.00-1.00----2.00---------------------------------1.00-------1.00----------1.00---------1.00-----1.001.00-------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCT...................................................................................22126.0026.00-4.001.002.00-2.00--1.001.00--1.001.00-------1.00---------------------1.00-------1.00--------1.00-------------1.00-------------------1.00----1.00-----1.00-1.00----1.001.00-----------------1.00----1.00------
.................................................................................................................................................TCGGAGGCATTGGGGCTGA......................................................................................19124.0024.003.004.00-1.00---2.00---------2.00-------1.00--1.00---------1.00----------1.00-----1.002.00-1.00----------------1.00----------------------------------1.00------1.00------------1.00------------
..................................................................................................................................................................................CCATGTCTCCTATGCCCCCAAGT.................................................23116.002.00-3.00----1.00--1.00--1.00--1.00-------------1.00--------------1.00---------1.00--------1.00----1.00-1.00-----1.00------1.00------------------------------------------1.00----------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGAC.....................................................................................20114.0014.003.00---4.001.00-------1.00-------------1.00-----------------------------------------------------------------1.00--------------1.00----------------1.00--------------1.00--
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTA..................................................................................23114.0026.005.00--------------1.00---1.00-----1.00-----1.00--------------1.00---2.00-1.00-1.00----------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTT..................................................................................23113.0026.00-5.001.00-1.00-1.00-1.00--1.00-------------------1.00-----------------------------1.00---1.00-----------------------------------------------------------------------------
..................................................................................................................................................................................CCATGTCTCCTATGCCCCCAAGA.................................................2319.002.00-----------3.00--4.00------------------------------------------------------1.00----------------------------------1.00--------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACA....................................................................................2118.0014.002.00----1.00----------1.00-----1.00----------------------------------------------------------------------------------------1.00-------1.00---------1.00-------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACC....................................................................................2218.008.002.00-2.00------1.00----------1.00--------------------------1.00--------------------------------------------------------------------------------------1.00--------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCAA..................................................................................2317.0055.00-3.00-------1.00---------1.00---2.00-----------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTTT.................................................................................2417.0026.00---1.00---1.00---------1.00--1.001.00-1.00------------------------------------------------------------------------------------------------------------------1.00----
................................................................................................................................................CTCGGAGGCATTGGGGCTGACCT...................................................................................2315.005.00-2.00-1.00---------------------------------1.00----------------------------------------------------------1.00----------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTG.......................................................................................1814.004.00-------------1.00-1.00-------------------2.00-----------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTAT.................................................................................2414.0026.00----------3.00-----------------------------1.00------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACT....................................................................................2114.0014.00-1.00----------------------------------1.00------------1.00-----------------------------------1.00---------------------------------------------------------
...................................................................................................................................................GGAGGCATTGGGGCTGACCTCATCTCCCTGA........................................................................3114.004.00----------4.00------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTAA.................................................................................2413.0026.00---1.00--------------------------------------2.00----------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCA...................................................................................2213.0055.00--------1.00----------------------------------------------------------------1.00-----------------------------------1.00---------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGAC.....................................................................................2113.003.001.00-----------------------1.00---------------------------------------------------------------1.00------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGTTT....................................................................................2113.004.00----2.00---------------------------------------------------------------------------------------1.00--------------------------------------------------
..................................................................................................................................................................................CCATGTCTCCTATGCCCCCAAGTT................................................2413.002.00------------------------------2.00-----------------1.00----------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTTA.................................................................................2413.0026.00---1.00------------1.00--1.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACCTT..................................................................................2413.005.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------1.00--------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGAA.....................................................................................2012.0024.00----------------------------------------------------------------------------------1.00-------1.00----------------------------------------------------
..................................................................................................................................................CGGAGGCATTGGGGCTGACCTC..................................................................................2212.002.00----------------------------------2.00------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACG....................................................................................2112.0014.00--------2.00--------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGAAC....................................................................................2112.0024.00---------------------1.00-----1.00-------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACCTA..................................................................................2412.005.002.00----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCATGTCTCCTATGCCCCCAAG..................................................2212.002.00------------1.00-------------1.00--------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGA......................................................................................2012.002.001.00------------------------------------------------------------------------------------------1.00---------------------------------------------------
...............................................................................................................................................CCTCGGAGGCATTGGGGCTGA......................................................................................2112.002.002.00----------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGAAAT...................................................................................2212.0024.00------2.00----------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGGAGAGAGCGGCGCTGCTGGAGCT.........2512.002.00---------------------------------------2.00-------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGAG.....................................................................................2012.0024.00---------------------------1.001.00------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................TTTCCGAGGAGAGAGCGGCGCTGCTGGAG...........2912.002.00---------------------------------------------2.00-------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACAA...................................................................................2212.0014.00---------------------------------------------------------1.00----------------------1.00--------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTCT.................................................................................242.000.001.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCAT..................................................................................2312.0055.00----------------------------------------------------------1.00--------------------------------------------------------1.00---------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGAAA....................................................................................2112.0024.00----1.00------------------------------------------------------------------------------------------------1.00-----------------------------------------
..............................................................................................................................................................................................................................GAGCGGCGCTGCTGGAGCTGTGGGAGC.2712.002.00---------------------------------2.00-------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGATTT...................................................................................2212.0024.00-------2.00---------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................TCCTTTCCGAGGAGAGAGCG.......................2011.001.00-----------------------------------------------------------1.00-----------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACTATA.................................................................................2411.0014.001.00----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................CCAAGCTGACCGTCCTG......................................171.000.00----------------------------------------------------------------1.00------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACCTTT.................................................................................2511.005.001.00----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TCCGAGGAGAGAGCGGCGCTGCTGGAGC..........2811.001.001.00----------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGAA.....................................................................................2111.002.00------------------------------------------------------------------------------1.00----------------------------------------------------------------
...................................................................................................................................................................................CATGTCTCCTATGCCCCCAAG..................................................2111.001.00-------------------------------------------------------------------1.00---------------------------------------------------------------------------
..................................................................................................................................................................................CCATGTCTCCTATGCCCCCACGT.................................................231.000.00---------------------------------------------------------------------------------1.00-------------------------------------------------------------
......................................................................................AAAAAGGCCTGAAGATGC..................................................................................................................................................181.000.00-----------------------------------------------------------------------------1.00-----------------------------------------------------------------
...........................................................................................................................................................................................................................AGAGAGCGGCGCTGCTGG.............1811.001.00----------------------------------------------------------------------------------------------------------------------------------------------1.00
.............................................................................................................................................................................................................CGTCCTTTCCGAGGAGAGAGCGGCGCTGCT...............3011.001.00-----------------------------------------------------------1.00-----------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGAAT....................................................................................2111.0024.001.00----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TTCCGAGGAGAGAGCGGCGCTGCTGG.............2611.001.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGCCC....................................................................................2111.004.00------------------1.00----------------------------------------------------------------------------------------------------------------------------
..................................................................................CGGAAAAAAGGCCTGAAGAT....................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------1.00-----------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACAT...................................................................................2311.003.00---------------------------------------------------1.00-------------------------------------------------------------------------------------------
..............................................................................................................GGATTAGGAATTCCAGGATAGCTGT...................................................................................................................2511.001.00-------------------------------------------------------------------------------------------------------------------------------------------1.00---
.................................................................................................................................................TCGGAGGCATTGGGGCTTACA....................................................................................2111.001.00-------------------------------------------------------------------------------------------------------1.00---------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTAC.................................................................................2411.0026.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTATT................................................................................2511.0026.00----------------------------------------------------1.00------------------------------------------------------------------------------------------
...................................................................................................................................................................ACCTCATCTCCCTGACCATCTC.................................................................221.000.00-----------------------------------------1.00-----------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTAAT................................................................................2511.0026.001.00----------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTTG......................................................................................1911.001.00-----------------1.00-----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACCA...................................................................................2311.008.001.00----------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTAAA................................................................................2511.0026.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------
......................................................................................AAAAAGGCCTGAAGATTCC.................................................................................................................................................191.000.00----------------------------------------------------------------------------------------------------1.00------------------------------------------
...........................................................................................................................................................................................................................AGAGAGCGGCGCTGCTGGAGCTGTG......2511.001.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCT........................................................................................1711.001.00------1.00----------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACG....................................................................................2211.003.00------------------------------------------------------------------------1.00----------------------------------------------------------------------
..................................................................................................................................................CGGAGGCATTGGGGCTGA......................................................................................1811.001.00------------------------------------------------------------------------------------1.00----------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACAGAA.................................................................................2411.0014.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................ACCATGTCTCCTATGCCCCCAAT..................................................2311.001.00----------------------------------------1.00------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGAGCGGCGCTGCTGG.............1621.001.00-------------------------------------------------------------------------------------------------------------------------------1.00---------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACCTAT.................................................................................2511.005.00-------------------------1.00---------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGGCCC...................................................................................2211.004.00-----------------------------------------1.00-----------------------------------------------------------------------------------------------------
.................................................................................................................................................................................ACCATGTCTCCTATGCCCCCAAG..................................................2311.001.00--------------------------------------------------------------1.00--------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTAAC................................................................................2511.0026.00-------------------------------------------------------------------------------------------------------------------------------------1.00---------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACT....................................................................................2211.003.00------------1.00----------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGAT.....................................................................................2111.002.00------------------------------------------------------------------------------------------------------------------------------------1.00----------
.................................................................................................................................................TCGGAGGCATTGGGGCTGATCTA..................................................................................2311.0024.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................TGCAAATCGGAAAAAAGGCCTGAAGATT...................................................................................................................................................2811.001.00---------------------------------------------------------1.00-------------------------------------------------------------------------------------
.......TTAATTAAAACAGGCGTCG................................................................................................................................................................................................................................191.000.00--------------------------------1.00--------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGAGGCATTGGGGCTGACCT...................................................................................2011.001.00------------------------1.00----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................TCCTTTCCGAGGAGAGAGCGGCGCTGCTGGAGC..........3311.001.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGACCTCTT................................................................................261.000.00-----------------------------------------------1.00-----------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACTA...................................................................................2211.0014.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................GCTGTTCTGTCTGCCTCGGAGGCATTG.............................................................................................2711.001.00----------------------------------------------------------------------------------------------------------------------1.00------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTTC.................................................................................2411.0026.00------------------------------------------------------------1.00----------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GAGAGAGCGGCGCTGCTGGA............2011.001.00-----------------------------------------------------------------------1.00-----------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGT......................................................................................201.000.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................GCGGCGCTGCTGGAGCTGTG......2011.001.00---------------------------------------------------------------------------------------------------------------------------------------1.00-------
.................................................................................................................................................................................................CCCCAAGCTGACCGTCCTTTC....................................2111.001.00------------------------------------------------------------------1.00----------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTCA.................................................................................2411.001.00---------------------------------------------------------------------------------------------------------------------------------------------1.00-
................................................................................................................................................CTCGGAGGCATTGGGGCTAA......................................................................................201.000.00----------------------------1.00------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CCGAGGAGAGAGCGGCGCTGCTGG.............2411.001.00----------------------1.00------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................CCTTTCCGAGGAGAGAGCGGCGCTG.................2511.001.00------------1.00----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................CGGAGGCATTGGGGCTGAT.....................................................................................1911.001.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGACCTTTT................................................................................2511.0026.00------------------------1.00----------------------------------------------------------------------------------------------------------------------
............................................................................................................TAGGATTAGGAATTCCAGGATAGC......................................................................................................................2411.001.00------1.00----------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................CCTCGGAGGCATTGGGGCTGAATT...................................................................................2411.002.001.00----------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGTAA....................................................................................221.000.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------
..........................................................TGTTGTTTTTCCCCTTTTGCAAATCGG.....................................................................................................................................................................2711.001.00-------------------------------------------------------------------------------------------------------------------------1.00---------------------
.......................................................................................................................................................................................................................GAGGAGAGAGCGGCGCTGCTGG.............2211.001.00-------------------------------------------------------------------------------1.00---------------------------------------------------------------
.......................................................................................................................................................................................................................GAGGAGAGAGCGGCGCTGCTGGAGCTGTGG.....3011.001.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCATGTCTCCTATGCCCCCAAGTA................................................2411.002.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................ACCATGTCTCCTATGCCCCCAA...................................................2211.001.00-------------------------------------------------------------------------------------------------1.00---------------------------------------------
.......................................................................................................................................................................................................................GAGGAGAGAGCGGCGCTGCT...............2011.001.00-----------------------------------------------------------------------------------------------------------------------------------------1.00-----
................................................................................................................................................CTCGGAGGCATTGGGGCTGACCTAAC................................................................................2611.005.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCGGAGGCATTGGGGCTGATA....................................................................................2111.0024.00----------------------------------------------------------------------------------------------------------------------------1.00------------------
................................................................................................................................................CTCGGAGGCATTGGGGCTGCCC....................................................................................221.000.00--------------------------------------1.00--------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGAGCGGCGCTGCTGGA............1720.500.50-------------------------------------------------------------0.50---------------------------------------------------------------------------------
................................................................................................................................................................................................................................GCGGCGCTGCTGGAGC..........1640.500.50--0.50--------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................GCTGGAGCTGTGGGAGC.1750.400.40--0.40--------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................TGCTGGAGCTGTGGGA...1670.140.14--0.14--------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................TAGGATTAGGAATTC...............................................................................................................................1590.110.11--------------------------------0.11--------------------------------------------------------------------------------------------------------------

Antisense strand
TTCTAGATTAATTAAAACAGGCCATCCCTTTTATATTGAACATGCACATACAAGTGAATGTTGTTTTTCCCCTTTTGCAAATCGGAAAAAAGGCCTGAAGATTAGCACTAGGATTAGGAATTCCAGGATAGCTGTTCTGTCTGCCTCGGAGGCATTGGGGCTGACCTCATCTCCCTGACCATGTCTCCTATGCCCCCAAGCTGACCGTCCTTTCCGAGGAGAGAGCGGCGCTGCTGGAGCTGTGGGAGCT
...................................................................................................................................................((.(((((.(((((.....(((......)))....))).)).))))).)).....................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189782SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040018(GSM532903)
G701N. (cervix)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR038854(GSM458537)
MM653. (cell line)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR029126(GSM416755)
143B. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR189786SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189787SRR189783SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR191427(GSM715537)
153genomic small RNA (size selected RNA from . (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		TAX577739(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR040014(GSM532899)
G623N. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040033(GSM532918)
G603T. (cervix)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040032(GSM532917)
G603N. (cervix)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR029131(GSM416760)
MCF7. (cell line)		SRR038853(GSM458536)
MELB. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
.................................................................................................................................AGCTGTTCTGTCTGCCTCTTG.................................................................................................... 211.000.00------------------------------------------------------------------------------------------------------1.00----------------------------------------
...................................................AAGTGAATGTTGTTTTTTCT................................................................................................................................................................................... 201.000.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................TGACCTCATCTCCCTAGG....................................................................... 181.000.00----------------------1.00------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................TGGGGGCATAGGAGACATGGTC.................................................... 2211.001.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------
.............................................................TGTTTTTCCCCTTTTCGGA.......................................................................................................................................................................... 191.000.00------------------------------------------------------------------------------------------------------------------------1.00----------------------
............................................................TTGTTTTTCCCCTTTTCAG........................................................................................................................................................................... 191.000.00--------------------------------------------------------------------------------------1.00--------------------------------------------------------
...................................................................................GGAAAAAAGGCCTGAACG..................................................................................................................................................... 181.000.00--------------------------------------------------------------------------------------------------1.00--------------------------------------------
........................................................................................................................................................................................................CTGACCGTCCTTTCCAACG............................... 191.000.00-------------------------------------------------------1.00---------------------------------------------------------------------------------------
.....................................................................................AAAAAAGGCCTGAAGTAAA.................................................................................................................................................. 191.000.00------------------------------------------------------------------------------------------------------------------1.00----------------------------