ID: uc011lpt.0
GENE: PAX5(6)
chr9:36840584-36840833-


(20)
B-CELL 		(2)
BRAIN 		(11)
CELL-LINE 		(1)
LIVER 		(1)
OTHER 		(2)
SKIN

Sense strand
ATGGCGAAGAGCCTCGAAATCTTATGAGCAGGTTGTGGCCCTGATGGGACTTGCCATCTGGGGAACAGACTGGGACAGAGATCTTGGTGAGAGAGGATGGTGGCCCGGACTGAGTGAGGGGAGGAAAGGACAGAAGTGGAGGAGACTGGTGGAAAGGGGACCCCGGATCTGACCTCGGTGCTCTCTCCCGTCTCTTCCAGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCCCCACCTGCA
........................................................................................................................................((((((((((....(((.((((.(((..((......))..))).)))).))).))))))))))...................................................
...................................................................................................................................132.................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR189784SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
........................................................................................................................................TGGAGGAGACTGGTGGAAAGG.............................................................................................21124.0024.001.00-3.006.006.00-2.00-1.00--1.00--1.00---1.001.00-------1.00----------
........................................................................................................................................TGGAGGAGACTGGTGGAAAG..............................................................................................20114.0014.002.00-3.002.002.00-3.00-------1.00----------------1.00------
.......................................................................................................................................GTGGAGGAGACTGGTGGAAAGGG............................................................................................23110.0010.00-8.001.00----1.00------------------------------
.......................................................................................................................................GTGGAGGAGACTGGTGGAAAGG.............................................................................................2219.009.00--4.001.001.00-----3.00---------------------------
........................................................................................................................................TGGAGGAGACTGGTGGAAAGGA............................................................................................2218.0024.001.00-1.001.001.003.001.00-------------------------------
......................................................................................................................................AGTGGAGGAGACTGGTGGAAA...............................................................................................2118.008.00-8.00------------------------------------
.......................................................................................................................................GTGGAGGAGACTGGTGGAAAGA.............................................................................................2216.004.001.00----5.00--------------------------------
.......................................................................................................................................GTGGAGGAGACTGGTGGAAAG..............................................................................................2114.004.00--1.00----1.00-2.00----------------------------
........................................................................................................................................TGGAGGAGACTGGTGGAAA...............................................................................................1914.004.001.00-----1.001.00-----1.00------------------------
.......................................................................................................................................GTGGAGGAGACTGGTGGAAA...............................................................................................2014.004.001.00-----1.00-----1.00-----------1.00-------------
........................................................................................................................................TGGAGGAGACTGGTGGAAAGGG............................................................................................2214.004.00--1.001.001.00---1.00-----------------------------
.......................................................................................................................................GTGGAGGAGACTGGTGGAAAGGT............................................................................................2313.009.00-------1.00-1.00-1.00--------------------------
........................................................................................................................................TGGAGGAGACTGGTGGAAAGA.............................................................................................2113.0014.001.00----1.001.00-------------------------------
.......................................................................................................................................GTGGAGGAGACTGGTGGAA................................................................................................1913.003.00-------1.00------------------------1.00---1.00-
.......................................................................................................................................GTGGAGGAGACTGGTGGAAAA..............................................................................................2113.004.00----------1.001.00--1.00-----------------------
........................................................................................................................................TGGAGGAGACTGGTGGAA................................................................................................1813.003.001.00----------------1.00-1.00------------------
.......................................................................................................................................GTGGAGGAGACTGGTGGAAAGGGGA..........................................................................................2512.002.00--------1.00------1.00----------------------
......................................................................................................................................AGTGGAGGAGACTGGTGGAAAGG.............................................................................................2312.002.001.00-----------1.00-------------------------
........................................................................................................................................TGGAGGAGACTGGTGGAAAGGGGA..........................................................................................2412.002.001.00--------1.00----------------------------
......................................................................................................................................AGTGGAGGAGACTGGTGGAAAG..............................................................................................2212.002.00------------------1.00-1.00-----------------
......................................................................................................................................AGTGGAGGAGACTGGTGGAAAGGT............................................................................................2412.002.00---1.001.00---------------------------------
.......................................................................................................................................GTGGAGGAGACTGGTGGAAAGGA............................................................................................2312.009.00-------1.00-----1.00------------------------
...........................................................................................................................................AGGAGACTGGTGGAAAGGGGAAAT.......................................................................................241.000.00------1.00-------------------------------
..................................................................................................................................................................................TGCTCTCTCCCGTCTCTTCCAG..................................................2211.001.00---------------1.00----------------------
.......................................................................................................................................GTGGAGGAGACTGGTGGAAAGGGAAAA........................................................................................2711.0010.001.00-------------------------------------
.......................................................................................................................................GTGGAGGAGACTGGTGGAAAGGAT...........................................................................................2411.009.00--------1.00-----------------------------
.......................................................................................................................................GTGGAGGAGACTGGTGGAATAA.............................................................................................2211.003.001.00-------------------------------------
.......................................................................................................................................GTGGAGGAGACTGGTGGAAAGGGGAA.........................................................................................2611.002.00----------------------------1.00---------
...........................................................................................................................................AGGAGACTGGTGGAAAGGGGACC........................................................................................2311.001.001.00-------------------------------------
...........................................................................................................................................AGGAGACTGGTGGAAAGGGG...........................................................................................2011.001.00-----------------------1.00--------------
......................................................................................................................................AGTGGAGGAGACTGGTGGAA................................................................................................2011.001.00---------1.00----------------------------
........................................................................................................................................TGGAGGAGACTGGTGGAAAGT.............................................................................................2111.0014.00------------1.00-------------------------
........................................................................................................................................TGGAGGAGACTGGTGGAAAGGGGAT.........................................................................................2511.002.001.00-------------------------------------
...........................................................................CAGAGATCTTGGTGAGAGAGGATGGTGGC..................................................................................................................................................2911.001.00----------------------------------1.00---
..........................................................................................................................................GAGGAGACTGGTGGAAAGGGGACCAA......................................................................................261.000.00--1.00-----------------------------------
........................................................................................................................................TGGAGGAGACTGGTGGAAAGGGGTTT........................................................................................2611.001.001.00-------------------------------------
......................................................................................................................................AGTGGAGGAGACTGGTGGAAAGGGGAC.........................................................................................2711.001.00-------1.00------------------------------
........................................................................................................................................TGGAGGAGACTGGTGGAAAAA.............................................................................................2111.004.00-------------1.00------------------------
......................................................................................................................................AGTGGAGGAGACTGGTGGAAACGG............................................................................................2411.008.00--------1.00-----------------------------
......................................................................................................................................AGTGGAGGAGACTGGTGGAAAGAA............................................................................................2411.002.00--------1.00-----------------------------
........................................................................................................................................TGGAGGAGACTGGTGGAAAGGGGAC.........................................................................................2511.001.00---------------1.00----------------------
........................................................................................................................GAGGAAAGGACAGAACTCC...............................................................................................................191.000.00-----------------------------1.00--------
.......................................................................................................................................GTGGAGGAGACTGGTGGAAAGGGGAT.........................................................................................2611.002.00---------------------------------1.00----
.......................................................................................TGAGAGAGGATGGTGTTCT................................................................................................................................................191.000.00----------------------1.00---------------
..................................................................................CTTGGTGAGAGAGGATGGAGC...................................................................................................................................................211.000.00------------------------------1.00-------
......................................................................................................................................AGTGGAGGAGACTGGTGGAT................................................................................................201.000.00--------------------1.00-----------------
.........................................................................................................................................GGAGGAGACTGGTGGAAAGGGGACC........................................................................................2511.001.00-------------1.00------------------------
.....................................................................................................................................AAGTGGAGGAGACTGGTGGAA................................................................................................2111.001.00-----------------1.00--------------------
...........................................................................................................................................AGGAGACTGGTGGAAAGGA............................................................................................191.000.001.00-------------------------------------
........................................................................................................................................TGGAGGAGACTGGTGGAAAGGGGACT........................................................................................2611.001.001.00-------------------------------------
........................................................................................................................................TGGAGGAGACTGGTGGAAAGAAA...........................................................................................2311.0014.001.00-------------------------------------
....................................................................................................TGGCCCGGACTGAGTT......................................................................................................................................161.000.00----------------1.00---------------------
.....................................................................................................................................AAGTGGAGGAGACTGGTCT..................................................................................................191.000.00-----------------------------------1.00--
.......................................................................................................................................GTGGAGGAGACTGGTGGA.................................................................................................1811.001.00-------1.00------------------------------
........................................................................................................................................TGGAGGAGACTGGTGGAAAGGGG...........................................................................................2311.001.00------------1.00-------------------------
.........................................................................................................................................................................................................................AGCGCTGCCGCCCGAGGAGCCGCCCCA......2711.001.00-----------1.00--------------------------
....................................................................................................................................................................................................CCAGGCTCCCCCTACCCGA...................................191.000.00----------------1.00---------------------
...........................................................................................................................................AGGAGACTGGTGGAACAG.............................................................................................181.000.00-----1.00--------------------------------
..................................................................................................................................................................................TGCTCTCTCCCGTCTCTTCCAGA.................................................2311.001.001.00-------------------------------------
...................................................................................................................................AGAAGTGGAGGAGACTG......................................................................................................1720.500.50-------------------------------------0.50

Antisense strand
ATGGCGAAGAGCCTCGAAATCTTATGAGCAGGTTGTGGCCCTGATGGGACTTGCCATCTGGGGAACAGACTGGGACAGAGATCTTGGTGAGAGAGGATGGTGGCCCGGACTGAGTGAGGGGAGGAAAGGACAGAAGTGGAGGAGACTGGTGGAAAGGGGACCCCGGATCTGACCTCGGTGCTCTCTCCCGTCTCTTCCAGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCCCCACCTGCA
........................................................................................................................................((((((((((....(((.((((.(((..((......))..))).)))).))).))))))))))...................................................
...................................................................................................................................132.................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR189784SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
..................................................................AGACTGGGACAGAGATCC...................................................................................................................................................................... 181.000.00---------------------1.00----------------
...................................................................................................................................................................................................................TATTATAGCGCTGCCGCATGA.................. 211.000.00--------------------------1.00-----------
..........................................................................................................................................................AGGGGACCCCGGATCTCCA............................................................................. 191.000.00-------------------------1.00------------