ID: uc011lnb.1_intron_0_0_chr9_19119830_r.5p
GENE: (5)
chr9:19120808-19121057-


(1)
AGO1.ip 		(3)
B-CELL 		(1)
BRAIN 		(5)
BREAST 		(12)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(2)
HELA 		(13)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(7)
SKIN 		(1)
XRN.ip

Sense strand
ACAAGACCAAAGGGGCAGTGACTGGCAGTGTGGAGAAGACCAAGTCTGTGGTCAGTGGCAGCATTAACACAGTCTTGGGGAGTCGGATGATGCAGCTCGTGAGCAGTGGCGTAGAAAATGCACTCACCAAATCAGAGCTGTTGGTAGAACAGTACCTCCCTCTCACTGAGGAAGAACTAGGTAACTGGAATTTTATCTTGAAATACTGTTTTATATTAAATCTTTCTTAAACAGCTTCATTGACATATAC
..................................................................................................(((((.....((((.....)))).))))).........((((((.....)))))).................................................................................................
..............................................................................................95..........................................................155.............................................................................................
SizePerfect hitTotal NormPerfect NormSRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040008(GSM532893)
G727N. (cervix)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR029128(GSM416757)
H520. (cell line)		GSM359193(GSM359193)
HepG2_3pM_7. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR038857(GSM458540)
D20. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038862(GSM458545)
MM472. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
...................................................................................................TGAGCAGTGGCGTAGAAAATGCA................................................................................................................................23112.0012.006.004.001.00-------1.00-----------------------------------------
.....................................................................................................................................AGAGCTGTTGGTAGAACA...................................................................................................1819.009.00----9.00-----------------------------------------------
...................................................................................................TGAGCAGTGGCGTAGAAAATG..................................................................................................................................2118.008.004.002.002.00-------------------------------------------------
.................................................................................................................................AATCAGAGCTGTTGGTAG.......................................................................................................1817.007.002.001.00-4.00------------------------------------------------
............................................TCTGTGGTCAGTGGCAGCA...........................................................................................................................................................................................1915.005.00--5.00-------------------------------------------------
.....................................................................................................AGCAGTGGCGTAGAAAATG..................................................................................................................................1915.005.002.002.00---1.00----------------------------------------------
....................ACTGGCAGTGTGGAGAAGA...................................................................................................................................................................................................................1915.005.002.003.00--------------------------------------------------
.........................................................................................................GTGGCGTAGAAAATGCACTCACC..........................................................................................................................2314.004.001.003.00--------------------------------------------------
..........................................AGTCTGTGGTCAGTGGCA..............................................................................................................................................................................................1814.004.00-1.001.00----1.00--1.00-----------------------------------------
.................................................................................................................................AATCAGAGCTGTTGGTAGAACA...................................................................................................2214.004.004.00---------------------------------------------------
.....................................................................................................AGCAGTGGCGTAGAAAATGCA................................................................................................................................2114.004.00-4.00--------------------------------------------------
.....................................................................................................AGCAGTGGCGTAGAAAATGCACTCACCA.........................................................................................................................2813.003.001.00-------2.00-------------------------------------------
..AAGACCAAAGGGGCAGTGACT...................................................................................................................................................................................................................................2113.003.00-3.00--------------------------------------------------
...................................................................................................TGAGCAGTGGCGTAGAAAAT...................................................................................................................................2013.003.001.002.00--------------------------------------------------
.........................................AAGTCTGTGGTCAGTGGCA..............................................................................................................................................................................................1913.003.001.001.00----1.00---------------------------------------------
..............................................................................................GCTCGTGAGCAGTGGCGTA.........................................................................................................................................1913.003.001.002.00--------------------------------------------------
................AGTGACTGGCAGTGTGGAGAA.....................................................................................................................................................................................................................2113.003.001.001.00----1.00---------------------------------------------
................................................................................................................................AAATCAGAGCTGTTGGTA........................................................................................................1813.003.002.00-------------------------------------1.00-------------
.....................................................................................................AGCAGTGGCGTAGAAAATTT.................................................................................................................................202.000.00-------2.00--------------------------------------------
.....................................................................................................AGCAGTGGCGTAGAAAATGCACTCATA..........................................................................................................................2712.001.001.001.00--------------------------------------------------
.................................................................................................................................................................CTCACTGAGGAAGAACTAGA.....................................................................202.000.001.00--1.00------------------------------------------------
...................................................................................................TGAGCAGTGGCGTAGAAAA....................................................................................................................................1912.002.001.00------1.00--------------------------------------------
....................ACTGGCAGTGTGGAGAAGACC.................................................................................................................................................................................................................2112.002.00-2.00--------------------------------------------------
.....................................................................................................AGCAGTGGCGTAGAAAATA..................................................................................................................................192.000.001.001.00--------------------------------------------------
...................................................................................................................................TCAGAGCTGTTGGTAGAAC....................................................................................................1912.002.00----------------2.00-----------------------------------
.................................................................AACACAGTCTTGGGGAGTCGGAT..................................................................................................................................................................2312.002.00---------------2.00------------------------------------
..................................................................................................GTGAGCAGTGGCGTAGAAA.....................................................................................................................................1912.002.001.00------------------------------------------1.00--------
..............................................................................................................................CCAAATCAGAGCTGTTGGT.........................................................................................................1912.002.00---2.00------------------------------------------------
......................................................................................................................................................................................................................................ACAGCTTCATTGACATC...172.000.00-----------2.00----------------------------------------
.....................................................................................................AGCAGTGGCGTAGAAAATGCACTCAC...........................................................................................................................2612.002.001.001.00--------------------------------------------------
....................ACTGGCAGTGTGGAGAAGAC..................................................................................................................................................................................................................2012.002.001.001.00--------------------------------------------------
.................................................................................................................................AATCAGAGCTGTTGGTAGGGT....................................................................................................2112.007.002.00---------------------------------------------------
.....................................................................................................AGCAGTGGCGTAGAAAATGCACTC.............................................................................................................................2412.002.00-2.00--------------------------------------------------
....................................................................................................................................CAGAGCTGTTGGTAGAACA...................................................................................................1912.002.001.00---------1.00-----------------------------------------
....................................................................................................GAGCAGTGGCGTAGAAAATG..................................................................................................................................2012.002.001.00--1.00------------------------------------------------
....................ACTGGCAGTGTGGAGAAGACCA................................................................................................................................................................................................................2212.002.00-1.001.00-------------------------------------------------
............................................TCTGTGGTCAGTGGCAGGA...........................................................................................................................................................................................192.000.00--2.00-------------------------------------------------
...AGACCAAAGGGGCAGTGACTGG.................................................................................................................................................................................................................................2212.002.00-1.00---------------------1.00----------------------------
...........................................................................TGGGGAGTCGGATGATGCAG...........................................................................................................................................................2012.002.001.001.00--------------------------------------------------
......................TGGCAGTGTGGAGAAGACCAAGTCTGTG........................................................................................................................................................................................................2812.002.002.00---------------------------------------------------
.....................................................................................................AGCAGTGGCGTAGAAAATGC.................................................................................................................................2012.002.002.00---------------------------------------------------
.....................................................................................................AGCAGTGGCGTAGAAAATGCACTCACC..........................................................................................................................2712.002.001.00-1.00-------------------------------------------------
......................TGGCAGTGTGGAGAAGAC..................................................................................................................................................................................................................1812.002.00-1.00---------------1.00----------------------------------
........................................................................................................................................................................AGGAAGAACTAGGTAACTGGAATT..........................................................2411.001.00-1.00--------------------------------------------------
..........................................................................TTGGGGAGTCGGATGATG..............................................................................................................................................................1811.001.001.00---------------------------------------------------
......................................ACCAAGTCTGTGGTCAGTGG................................................................................................................................................................................................2011.001.00------------------------------------1.00---------------
.................................................................................................CGTGAGCAGTGGCGTAGAAAATG..................................................................................................................................2311.001.001.00---------------------------------------------------
................................................................................................................................AAATCAGAGCTGTTGGTAG.......................................................................................................1911.001.00-1.00--------------------------------------------------
...AGACCAAAGGGGCAGTGACT...................................................................................................................................................................................................................................2011.001.00-1.00--------------------------------------------------
................................................................................................TCGTGAGCAGTGGCGTAGAAAATGCA................................................................................................................................2611.001.001.00---------------------------------------------------
...........GGGGCAGTGACTGGCAGT.............................................................................................................................................................................................................................1811.001.00------------1.00---------------------------------------
.................................................................AACACAGTCTTGGGGAGTCGGATGATG..............................................................................................................................................................2711.001.00-----------------------------1.00----------------------
................................................................................................................................AAATCAGAGCTGTTGATA........................................................................................................181.000.001.00---------------------------------------------------
..................................................................................................................................ATCAGAGCTGTTGGTAGA......................................................................................................1811.001.00-----------------------------------1.00----------------
.................................................................AACACAGTCTTGGGGAG........................................................................................................................................................................1711.001.00-----------1.00----------------------------------------
................................................................................................................................AAATCAGAGCTGTTGGTAGAA.....................................................................................................2111.001.001.00---------------------------------------------------
..........................................AGTCTGTGGTCAGTGGCAGGAT..........................................................................................................................................................................................221.000.00-1.00--------------------------------------------------
...................................................................................................TGAGCAGTGGCGTAGAAAATA..................................................................................................................................2111.003.001.00---------------------------------------------------
..............................................................................................GCTCGTGAGCAGTGGCGTAGAAAATGCA................................................................................................................................2811.001.00--------------1.00-------------------------------------
.......................................................................................................CAGTGGCGTAGAAAATGCACTCAT...........................................................................................................................241.000.00------------1.00---------------------------------------
....................................................................ACAGTCTTGGGGAGTCGGATGATG..............................................................................................................................................................2411.001.001.00---------------------------------------------------
..................................................................................................GTGAGCAGTGGCGTAGCAA.....................................................................................................................................191.000.00---------1.00------------------------------------------
...................................................................................CGGATGATGCAGCTCGT......................................................................................................................................................1711.001.00---------------------1.00------------------------------
.................GTGACTGGCAGTGTGGAGAAGAAC.................................................................................................................................................................................................................241.000.00-1.00--------------------------------------------------
................................................................................................................................AAATCAGAGCTGTTGGTAGAACA...................................................................................................2311.001.00------------------1.00---------------------------------
.......................................................................................TGATGCAGCTCGTGAGCAGTGGCGT..........................................................................................................................................2511.001.00---1.00------------------------------------------------
...................................................................................CGGATGATGCAGCTCGTGAGCAGTGGCG...........................................................................................................................................2811.001.00------1.00---------------------------------------------
...................................................................................................TGAGCAGTGGCGTAGAA......................................................................................................................................1711.001.00---1.00------------------------------------------------
.................................................................................................................................AATCAGAGCTGTTGGTAGA......................................................................................................1911.001.00-----------------1.00----------------------------------
............................................................................................................GCGTAGAAAATGCACTCACCA.........................................................................................................................2111.001.001.00---------------------------------------------------
................................................................................................TCGTGAGCAGTGGCGTAGAAAAT...................................................................................................................................2311.001.001.00---------------------------------------------------
......................TGGCAGTGTGGAGAAGACC.................................................................................................................................................................................................................1911.001.00-1.00--------------------------------------------------
...................................................................................................TGAGCAGTGGCGTAGAAAATGC.................................................................................................................................2211.001.00-1.00--------------------------------------------------
.........................................................................CTTGGGGAGTCGGATGATGC.............................................................................................................................................................2011.001.00----------------------------------------------1.00-----
............................................................................GGGGAGTCGGATGATGCAG...........................................................................................................................................................1911.001.00--------1.00-------------------------------------------
..............GCAGTGACTGGCAGTGTGG.........................................................................................................................................................................................................................1911.001.00------------------------------------------------1.00---
.................................................................AACACAGTCTTGGGGAGTCGG....................................................................................................................................................................2111.001.00-----1.00----------------------------------------------
.......................................CCAAGTCTGTGGTCAGTGGCA..............................................................................................................................................................................................2111.001.00-------------------------1.00--------------------------
.........................................................................................................GTGGCGTAGAAAATGCACTCATA..........................................................................................................................231.000.00-1.00--------------------------------------------------
...............................................................................................CTCGTGAGCAGTGGCGTAGA.......................................................................................................................................2011.001.00--------------------------------1.00-------------------
............................................................GCATTAACACAGTCTTGGGGAGT.......................................................................................................................................................................2311.001.001.00---------------------------------------------------
............................................TCTGTGGTCAGTGGCAGGTTT.........................................................................................................................................................................................211.000.00--1.00-------------------------------------------------
....GACCAAAGGGGCAGTGACTGGC................................................................................................................................................................................................................................2211.001.00---------------------------------------------1.00------
.........................................................................................................................ACTCACCAAATCAGAGCTGT.............................................................................................................2011.001.00---------1.00------------------------------------------
...........................................................AGCATTAACACAGTCTTGGGGAG........................................................................................................................................................................2311.001.001.00---------------------------------------------------
........AAAGGGGCAGTGACTGGC................................................................................................................................................................................................................................1811.001.00-----1.00----------------------------------------------
...............................................................................................................................................................CTCTCACTGAGGAAGAACTAGGTA...................................................................2411.001.001.00---------------------------------------------------
..................................................................................................GTGAGCAGTGGCGTAGAAAATG..................................................................................................................................2211.001.00------------1.00---------------------------------------
..........................................................................................TGCAGCTCGTGAGCAGTGGCGTAGAA......................................................................................................................................2611.001.001.00---------------------------------------------------
.........................................AAGTCTGTGGTCAGTGGC...............................................................................................................................................................................................1811.001.00---1.00------------------------------------------------
.....................................................................................................AGCAGTGGCGTAGAAAATGCACT..............................................................................................................................2311.001.001.00---------------------------------------------------
............................................................GCATTAACACAGTCTTGGG...........................................................................................................................................................................1911.001.00------------------1.00---------------------------------
................................................................................AGTCGGATGATGCAGCTCGTGAGCAGTGG.............................................................................................................................................2911.001.00----------------------------------------1.00-----------
............................................................................................................GCGTAGAAAATGCACTCACCAAATCA....................................................................................................................2611.001.00-1.00--------------------------------------------------
....................................................................................GGATGATGCAGCTCGTGAGCAGTGGCG...........................................................................................................................................2711.001.001.00---------------------------------------------------
..................TGACTGGCAGTGTGGAGAAGAA..................................................................................................................................................................................................................221.000.001.00---------------------------------------------------
.............................................................CATTAACACAGTCTTGGGGAGTCGG....................................................................................................................................................................2511.001.00---------------------------------1.00------------------
..........................................................................................................................CTCACCAAATCAGAGCTGTTGG..........................................................................................................2211.001.00-------------------------------1.00--------------------
.......................................................................................................CAGTGGCGTAGAAAATGCA................................................................................................................................1911.001.00---------------------------------------1.00------------
..AAGACCAAAGGGGCAGTGACTGGCAGG.............................................................................................................................................................................................................................271.000.00--1.00-------------------------------------------------
...............CAGTGACTGGCAGTGTGG.........................................................................................................................................................................................................................1811.001.00---1.00------------------------------------------------
.......................................................................GTCTTGGGGAGTCGGATGATGCAG...........................................................................................................................................................2411.001.00-1.00--------------------------------------------------
....................ACTGGCAGTGTGGAGAAGAACA................................................................................................................................................................................................................2211.005.00-1.00--------------------------------------------------
......................................................................AGTCTTGGGGAGTCGGATGATGC.............................................................................................................................................................2311.001.00-----1.00----------------------------------------------
.....................................................................CAGTCTTGGGGAGTCGGATGATGC.............................................................................................................................................................2411.001.00--------------------------------------------1.00-------
.......................................................................GTCTTGGGGAGTCGGATGAT...............................................................................................................................................................2011.001.001.00---------------------------------------------------
.................GTGACTGGCAGTGTGGAGAAGAA..................................................................................................................................................................................................................231.000.001.00---------------------------------------------------
..................TGACTGGCAGTGTGGAGAAGACC.................................................................................................................................................................................................................2311.001.001.00---------------------------------------------------
.....................................................................................................................................................................CTGAGGAAGAACTAGGTAACTGG..............................................................2311.001.00-1.00--------------------------------------------------
..................................................................................................GTGAGCAGTGGCGTAGAAAAT...................................................................................................................................2111.001.00-1.00--------------------------------------------------
...................................................................................................................................TCAGAGCTGTTGGTAGAACAGT.................................................................................................2211.001.00--------------------------1.00-------------------------
......................TGGCAGTGTGGAGAAGACCAAGTC............................................................................................................................................................................................................2411.001.001.00---------------------------------------------------
.................................................................AACACAGTCTTGGGGAGTCG.....................................................................................................................................................................2011.001.00-----------------------------------------------1.00----
.........AAGGGGCAGTGACTGGCAGTGGG..........................................................................................................................................................................................................................231.000.00-1.00--------------------------------------------------
........AAAGGGGCAGTGACTGGCAGTGTG..........................................................................................................................................................................................................................2411.001.00----------------------1.00-----------------------------
................................GAGAAGACCAAGTCTGT.........................................................................................................................................................................................................1711.001.00-------------------------------------1.00--------------
...................................................................CACAGTCTTGGGGAGTCGGAT..................................................................................................................................................................2111.001.00-----1.00----------------------------------------------
....................ACTGGCAGTGTGGAGAAGACCAAGTC............................................................................................................................................................................................................2611.001.00-1.00--------------------------------------------------
....................ACTGGCAGTGTGGAGAAG....................................................................................................................................................................................................................1811.001.001.00---------------------------------------------------
..............................................TGTGGTCAGTGGCAGCATTAATA.....................................................................................................................................................................................231.000.001.00---------------------------------------------------
.............................................................................................AGCTCGTGAGCAGTGGCGTA.........................................................................................................................................2011.001.00------------------------1.00---------------------------
.................................................................................................................................................................CTCACTGAGGAAGAACTAGAA....................................................................211.000.001.00---------------------------------------------------
...................................................................................................TGAGCAGTGGCGTAGAAAATC..................................................................................................................................2111.003.001.00---------------------------------------------------
...................................................................................CGGATGATGCAGCTCGTGAGCAGTGGC............................................................................................................................................2711.001.00-------------------1.00--------------------------------
.....................................................................................................AGCAGTGGCGTAGAAAATGCACTCA............................................................................................................................2511.001.001.00---------------------------------------------------
..................................................................................................................................................GAACAGTACCTCCCTCTCACTGAGGAA.............................................................................2711.001.00------------------------------1.00---------------------
........AAAGGGGCAGTGACTGGCA...............................................................................................................................................................................................................................1911.001.00-1.00--------------------------------------------------
.................................................................AACACAGTCTTGGGGAGT.......................................................................................................................................................................1811.001.00------1.00---------------------------------------------
....................................................................ACAGTCTTGGGGAGTCGG....................................................................................................................................................................1811.001.00-1.00--------------------------------------------------
...................GACTGGCAGTGTGGAGAAGAAC.................................................................................................................................................................................................................221.000.001.00---------------------------------------------------
.......................................................................................................CAGTGGCGTAGAAAAT...................................................................................................................................1611.001.00-----------------------------------------1.00----------
...............................................................................................CTCGTGAGCAGTGGCGTA.........................................................................................................................................1811.001.00-----1.00----------------------------------------------
..........................AGTGTGGAGAAGACCAAGT.............................................................................................................................................................................................................1911.001.00--------------1.00-------------------------------------
...AGACCAAAGGGGCAGTGACTG..................................................................................................................................................................................................................................2111.001.001.00---------------------------------------------------
..............................................................................................................................CCAAATCAGAGCTGTTGGTAGAAC....................................................................................................2411.001.00--------------------1.00-------------------------------
............................TGTGGAGAAGACCAAGTCTGTGGT......................................................................................................................................................................................................2411.001.00---------1.00------------------------------------------
..............................................................................................GCTCGTGAGCAGTGGCGT..........................................................................................................................................1811.001.00-1.00--------------------------------------------------
........................................................................................................AGTGGCGTAGAAAATGCA................................................................................................................................1811.001.00--------1.00-------------------------------------------
.........................................AAGTCTGTGGTCAGTGGCAGCA...........................................................................................................................................................................................2211.001.001.00---------------------------------------------------
......................TGGCAGTGTGGAGAAGAA..................................................................................................................................................................................................................181.000.00----------------------------------1.00-----------------
...................................................................................................TGAGCAGTGGCGTAGAAAATGCAC...............................................................................................................................2411.001.00-1.00--------------------------------------------------
............................................................GCATTAACACAGTCTTGGGGAGTCGG....................................................................................................................................................................2611.001.00------------------------------------------1.00---------
....................................................................................GGATGATGCAGCTCGTGAGCAGTGGC............................................................................................................................................2611.001.00-1.00--------------------------------------------------
.......................................................................................................CAGTGGCGTAGAAAATGCACTCACCAAAT......................................................................................................................2911.001.001.00---------------------------------------------------
........................................................................................................AGTGGCGTAGAAAATGCACTCACCAAA.......................................................................................................................2711.001.00------1.00---------------------------------------------
..AAGACCAAAGGGGCAGTGACTGGCAGTG............................................................................................................................................................................................................................2811.001.001.00---------------------------------------------------
........AAAGGGGCAGTGACTGGCAGTGT...........................................................................................................................................................................................................................2311.001.00---------1.00------------------------------------------
...................................................................CACAGTCTTGGGGAGTCGGATGATGC.............................................................................................................................................................2611.001.00---------------------------1.00------------------------
.............................................CTGTGGTCAGTGGCAGCA...........................................................................................................................................................................................1820.500.50--0.50-------------------------------------------------
.................................................................................................................................AATCAGAGCTGTTGGT.........................................................................................................1620.500.50-------------------------------------------------0.50--
....................................................................................................................................................................ACTGAGGAAGAACTAG......................................................................1680.120.12---------------------------------------------------0.12
....................................................................................................................................................................ACTGAGGAAGAACTAGAAAA..................................................................2080.120.12-------0.12--------------------------------------------

Antisense strand
ACAAGACCAAAGGGGCAGTGACTGGCAGTGTGGAGAAGACCAAGTCTGTGGTCAGTGGCAGCATTAACACAGTCTTGGGGAGTCGGATGATGCAGCTCGTGAGCAGTGGCGTAGAAAATGCACTCACCAAATCAGAGCTGTTGGTAGAACAGTACCTCCCTCTCACTGAGGAAGAACTAGGTAACTGGAATTTTATCTTGAAATACTGTTTTATATTAAATCTTTCTTAAACAGCTTCATTGACATATAC
..................................................................................................(((((.....((((.....)))).))))).........((((((.....)))))).................................................................................................
..............................................................................................95..........................................................155.............................................................................................
SizePerfect hitTotal NormPerfect NormSRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040008(GSM532893)
G727N. (cervix)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR029128(GSM416757)
H520. (cell line)		GSM359193(GSM359193)
HepG2_3pM_7. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR038857(GSM458540)
D20. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038862(GSM458545)
MM472. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
................................................................................................................................................TAGAACAGTACCTCCCTGGT...................................................................................... 201.000.00----------------------------1.00-----------------------
............................................................CCCAAGACTGTGTTAATGC........................................................................................................................................................................... 1911.001.00-------------1.00--------------------------------------
..................................................GTCAGTGGCAGCATTTG....................................................................................................................................................................................... 171.000.00----------1.00-----------------------------------------
...............................................................CCCAAGACTGTGTTAA........................................................................................................................................................................... 1621.001.00-------------0.50-----0.50--------------------------------
......................................................GTGGCAGCATTAACACAGTCTTGGCGAC........................................................................................................................................................................ 281.000.00-------------1.00--------------------------------------
...............................................................CCAAGACTGTGTTAA............................................................................................................................................................................ 1550.200.20--------------------------------------------------0.20-