ID: uc011ljp.1_intron_8_0_chr8_141716305_r.3p
GENE: (2)
chr8:141716255-141716504-


(1)
AGO2.ip
(1)
B-CELL
(1)
BRAIN
(4)
BREAST
(2)
CELL-LINE
(1)
HEART
(3)
HELA
(1)
LIVER
(2)
OTHER
(5)
SKIN

Sense strand
TCAGTTTTTCACATGTAGCTATCCAGTTGCCACAGCATCATTTGTTGAAAAGACTGTTCTTTCCCTATTGAAATGTCTTAGCATCTTTTTATCATTCTTTTCAAGTAAGCTCTATTAGGAAAATGTCTTTTTCGATTCATAAAGTACAGGTTTGTCAAAATCAAAAGGTTCATTCATATGATGCTCTCTTGATTTTACAGCCCAGCAGACCGGGTTATCCCAGTCCGAGGTCCAGCGAAGGATTTTATCC
........................................................................................................................................................(((.((((((((.((((((((....)))).)).)).)))))))))))...................................................
.........................................................................................................................................138...........................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR343334SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................................................................................TGTCTTTTTCGATTCATAAAGTACAGGTTTGTCAAAATCAAAAGGTTCATTCATATGATGCTCTCTTGATTTTACAG..................................................77116.0016.007.008.00-----1.00-------------
............................................................................................................................GTCTTTTTCGATTCATAAAGTACAGGTTTGTCAAAATCAAAAGGTTCATTCATATGATGCTCTCTTGATTTTACAG..................................................76115.0015.006.009.00-------------------
............................................................................................................................GTCTTTTTCGATTCATAAAGTACAGGTTTGTCAAAATCAAAAGGTTCATTCATATGATGCTCTCTTGATTTTAC....................................................74111.0011.0011.00--------------------
...........................................................................................................................TGTCTTTTTCGATTCATAAAGTACAGGTTTGTCAAAATCAAAAGGTTCATTCATATGATGCTCTCTTGATTTTACA...................................................7615.005.005.00--------------------
...........................................................................................................................TGTCTTTTTCGATTCATAAAGTACAGGTTTGTCAAAATCAAAAGGTTCATTCATATGATGCTCTCTTGATTTTAC....................................................7514.004.004.00--------------------
..............................................................................................................................................AGTACAGGTTTGTCATCTG.........................................................................................191.000.00---------------1.00-----
.....................................................................................................................................................................................................................GTTATCCCAGTCCGAGGTCCA................2111.001.00------1.00--------------
.................................................................................................................................................................................ATGATGCTCTCTTGATTTTACAG..................................................2311.001.00-----------------1.00---
...................................................................................................................................................................................................................GGGTTATCCCAGTCCGAGGTCCAGC..............2511.001.00--------1.00------------
................................................................................................................................................TACAGGTTTGTCAAAATTCC......................................................................................201.000.00----------------1.00----
...................................................................................................................................................................................................................................AGGTCCAGCGAAGGATTTTA...2011.001.00-------------1.00-------
.......................................................................................................................................................................................................................TATCCCAGTCCGAGGTCCAGCGAAGG.........2611.001.00--1.00------------------
.........................................................................................................................................................................................CTCTTGATTTTACAGCCCAGCAGACCGG.....................................2811.001.00-------------------1.00-
.............TGTAGCTATCCAGTTGCCACAGCATC...................................................................................................................................................................................................................2611.001.00--------------1.00------
......................................................................................................................................................................................................AGCCCAGCAGACCGGGTTATCCCAG...........................2511.001.00----------1.00----------
...........................................................................................................................................................CAAAATCAAAAGGTTGGAT............................................................................191.000.00------------1.00--------
...........................................................................................................................................................................ATTCATATGATGCTCTCTTGATTTTACAG..................................................2911.001.00--1.00------------------

Antisense strand
TCAGTTTTTCACATGTAGCTATCCAGTTGCCACAGCATCATTTGTTGAAAAGACTGTTCTTTCCCTATTGAAATGTCTTAGCATCTTTTTATCATTCTTTTCAAGTAAGCTCTATTAGGAAAATGTCTTTTTCGATTCATAAAGTACAGGTTTGTCAAAATCAAAAGGTTCATTCATATGATGCTCTCTTGATTTTACAGCCCAGCAGACCGGGTTATCCCAGTCCGAGGTCCAGCGAAGGATTTTATCC
........................................................................................................................................................(((.((((((((.((((((((....)))).)).)).)))))))))))...................................................
.........................................................................................................................................138...........................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR343334SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.......................................................GTTCTTTCCCTATTGTCTG................................................................................................................................................................................ 192.000.00-----2.00---------------
..........................................................................................................................................................TCAAAATCAAAAGGTTAGAT............................................................................ 202.000.00----2.00----------------
............................................................................................................................................AAAGTACAGGTTTGTCC............................................................................................. 171.000.00---------1.00-----------
...........................................................................................................................................................CAAAATCAAAAGGTTCAGA............................................................................ 191.000.00---1.00-----------------
..........................................................................................................................................................TCAAAATCAAAAGGTTATA............................................................................. 191.000.00---1.00-----------------
..........................................................................GTCTTAGCATCTTTTTTTA............................................................................................................................................................. 191.000.00-----------1.00---------
......TTTCACATGTAGCTACTGT................................................................................................................................................................................................................................. 191.000.00------------------1.00--
.......................................................................................................................................................................................................CCCGGTCTGCTGGGC.................................... 1550.200.20--------------------0.20