ID: uc011kvl.1_intron_11_0_chr7_151329225_r.3p
GENE: (2)
chr7:151329175-151329424-


(1)
AGO1.ip
(3)
AGO2.ip
(9)
B-CELL
(21)
BREAST
(19)
CELL-LINE
(22)
CERVIX
(8)
HEART
(2)
LIVER
(1)
OTHER
(59)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
GCGGCGGCGGCGGCGGCCTCGGGCGGGTGGGGGCAGCGCTCCCGCTCCGCCCCCGGCCCCCGCTGCCCGCGTCCCCTGCCAGGCCCCTCCTCCCGGCGGCGCGGCAGAGCCAGGCCCCAGCGCTCGGCCGGCCGCGAGCCCGCCGGCCGGGGACGAGCGTCGCAGCTCATGCTGATCGCTGTCCTCCTCCTCCCCCTCAGGCGGCGCTGGCGGCGGCCCTGGGACCCGCGGAAGCCGGCATGCTGGAGAA
...............................................................................................................(((.......((.((((.(((.....))).)))))).((((((.((((...((((....))))..))))))))))........))).....................................................
.............................................................................................................110.......................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR040028(GSM532913)
G026N. (cervix)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040019(GSM532904)
G701T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040037(GSM532922)
G243T. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR040007(GSM532892)
G601T. (cervix)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR040009(GSM532894)
G727T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040041(GSM532926)
G612T. (cervix)
GSM532889(GSM532889)
G576N. (cervix)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR191485(GSM715595)
123genomic small RNA (size selected RNA from . (breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR040011(GSM532896)
G529T. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR040036(GSM532921)
G243N. (cervix)
TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
GSM532890(GSM532890)
G576T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040025(GSM532910)
G613T. (cervix)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
TAX577590(Rovira)
total RNA. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040014(GSM532899)
G623N. (cervix)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR343335SRR038860(GSM458543)
MM426. (cell line)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR040032(GSM532917)
G603N. (cervix)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532887(GSM532887)
G761N. (cervix)
SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)
SRR040043(GSM532928)
G428T. (cervix)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)
SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR040035(GSM532920)
G001T. (cervix)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
....................................................................................................................................................................................GTCCTCCTCCTCCCCCGTC...................................................19105.000.0012.004.00-5.003.001.006.002.005.002.002.002.002.003.00-2.001.002.001.002.002.00--2.001.001.003.00-2.00--3.00-1.001.00-1.00-2.001.001.001.001.00-1.002.00-1.001.00--1.00----1.001.00----1.00-1.00-----1.00----1.00-1.001.00---------1.001.00-1.00-1.001.00--1.00------------------1.00-----1.00----1.001.00------1.00---------
....................................................................................................................................................................................GTCCTCCTCCTCCCCCG.....................................................1756.000.00-1.007.001.003.004.00-1.00-2.004.00-1.001.00-1.00-1.00----1.001.001.00-----1.00----3.00---2.00-1.00--1.00--1.001.00-2.00--2.002.00-1.00---1.00------1.00---1.00----------1.001.00---1.00----------------1.00-------------1.00------------------1.00-------
....................................................................................................................................................................................GTCCTCCTCCTCCCCCGTCT..................................................2041.000.004.003.00-2.00-----1.00--3.001.00--1.00--1.001.00-1.001.00-1.00------2.001.001.00-1.00-1.00--1.002.00---2.00--1.00----------1.00-----1.00-1.00---1.00-----------1.00-----------------1.00-------1.00-1.00-------------1.00------------------
....................................................................................................................................................................................GTCCTCCTCCTCCCCCGT....................................................1837.000.003.001.002.00-1.001.00-2.001.002.00-4.00----2.002.00---1.00--1.001.001.00--3.00-------------------1.00-1.00-----1.00-----2.00-----1.00-----------1.00---------------------1.00----------------------------1.00------------
..................................................................................................................................................................................CTGTCCTCCTCCTCCCCCG.....................................................195.000.00-------2.00----------------1.00---------------2.00--------------------------------------------------------------------------------------------------------
..................................................................................................................CCCCAGCGCTCGGCCGGCC.....................................................................................................................1913.003.00--------------3.00----------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................GTCCTCCTCCTCCCCGGA....................................................1802.001.00--------------------------------1.00---------------------------------------------------------------------------------------------------------1.00------
....................................................................................................................................................................................GTCCTCCTCCTCCCCCGG....................................................182.000.00-----1.00--------------------------------------------------------1.00----------------------------------------------------------------------------------
....................................................................................................................................................................................GTCCTCCTCCTCCCCCGGCC..................................................202.000.00-------------------------------------------1.00--------------------1.00--------------------------------------------------------------------------------
...................................................................................CCCCTCCTCCCGGCGCGC.....................................................................................................................................................182.000.00----1.00--------------------------------------------------1.00-----------------------------------------------------------------------------------------
...................................................................................................................................................................................TGTCCTCCTCCTCCCCCGTC...................................................202.000.00------1.00----------------------------------------------------------------------------------------------1.00-------------------------------------------
.......................................................................................................................................................GACGAGCGTCGCAGCTCATG...............................................................................2012.002.00-------------------------------------------------------------------------1.00---------------------------------------------------------1.00-------------
....................................................................................................................................................................................GTCCTCCTCCTCCCCCGGC...................................................192.000.00----------------------------------1.00--------1.00-----------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................CGGCGCTGGCGGCGGCCCTGGG...........................2211.001.00---------------------------------------------------------------------------------------------------------------------1.00---------------------------
..................................................................................................................................................................................CTGTCCTCCTCCTCCCCCGTC...................................................211.000.00------------------------------1.00------------------------------------------------------------------------------------------------------------------
.............................................................................................................................GGCCGGCCGCGAGCCGGG...........................................................................................................181.000.00----------------------------------------------------------1.00--------------------------------------------------------------------------------------
................CCTCGGGCGGGTGGGGGCAGAA....................................................................................................................................................................................................................221.000.00------------------------------------------------------------------------------------------------------------------------1.00------------------------
...............................................................................................GCGGCGCGGCAGAGC............................................................................................................................................1511.001.00-------------------------1.00-----------------------------------------------------------------------------------------------------------------------
............................................................................................................................CGGCCGGCCGCGAGCCCG............................................................................................................1811.001.00-------------------------------------1.00-----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................GTCCTCCTCCTCCCCCTTGTC.................................................211.000.00---------------------------------------------------------------------------------------------------------------------------------1.00---------------
........................................................................................................................................................................ATGCTGATCGCTGTCCTCCTTGAA..........................................................241.000.00------------------------------------------------------------------------------------------------1.00------------------------------------------------
................................................................................................................................................................................................................................CCCGCGGAAGCCGGCATG........1811.001.00----------------------------------------------------------------------------------------------------------1.00--------------------------------------
...........................................................................................................................................................AGCGTCGCAGCTCATGCTGAT..........................................................................2111.001.00------------------1.00------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGCGGCGCTGGCGGCCGTG................................201.000.00-------------------------------------------------------------1.00-----------------------------------------------------------------------------------
.....................................................................................................................................GCGAGCCCGCCGGCC......................................................................................................1511.001.00---------------------------------1.00---------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GGGGACGAGCGTCGCAGCTCATGCTG............................................................................2611.001.00----------------------------------------------------------------------------1.00--------------------------------------------------------------------
...................................................................................CCCCTCCTCCCGGCGCGCG....................................................................................................................................................191.000.00--------------------------------------------------------------------------------------------------------------------------------------1.00----------
....................................................................................................................................................................................GTCCTCCTCCTCCCCCGCC...................................................191.000.00----------------1.00--------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................GTCCTCCTCCTCCCCCGTCA..................................................201.000.001.00------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................GCGGCGCTGGCGGCGCTG................................181.000.00------------------------------------1.00------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................GTCCTCCTCCTCCCCCCTTT..................................................201.000.00----------------------1.00--------------------------------------------------------------------------------------------------------------------------
.............................................TCCGCCCCCGGCCCCCGCGTC........................................................................................................................................................................................211.000.00-------------------------------------------------------------------------------------1.00-----------------------------------------------------------
..........................................................................................................................................CCCGCCGGCCGGGGA.................................................................................................1531.001.00---------------------------0.33---------------------------------------------------------------------------------------------------------------0.67-----
....................................................................................................................................................GGGGACGAGCGTCGCAGCTCATT...............................................................................231.000.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GCGGCGGCCCTGGGACCCGCGGAAGCC..............2711.001.00------------------1.00------------------------------------------------------------------------------------------------------------------------------
.................................................................................................GGCGCGGCAGAGCCAGGCCCCAGCG................................................................................................................................2511.001.00------------------------------------------------------------------------------------------------------------------1.00------------------------------
......GCGGCGGCGGCCTCGCTGG.................................................................................................................................................................................................................................191.000.00----------------------------------------------------------1.00--------------------------------------------------------------------------------------
............................................................................................................................................................................................................CGCTGGCGGCGGCCCTGGG...........................1911.001.00------------------------------1.00------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCGGGGACGAGCGTCGCAGC....................................................................................2111.001.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................GCGGCCCTGGGACCCGCGGAAGC...............2311.001.00--------------------------------------------------------------------------------------1.00----------------------------------------------------------
..........................................................................................................................................................................................................................CTGGGACCCGCGGAAGC...............1711.001.00-------------------1.00-----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................CGGCGCTGGCGGCGGGCG...............................181.000.00-----------------------------------------------------------------------------------------------------------------1.00-------------------------------
.....................................................................................................................................GCGAGCCCGCCGGCCGGGGACGAGCG...........................................................................................2611.001.00------------------------------------------------------------------------------------------------------------1.00------------------------------------
...................................................................................................................................................................................TGTCCTCCTCCTCCCCCG.....................................................181.000.00--------------------1.00----------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................GTCCTCCTCCTCCCCCGC....................................................181.000.00--------1.00----------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................GGACCCGCGGAAGCCGGCAT.........2011.001.00------------------1.00------------------------------------------------------------------------------------------------------------------------------
....CGGCGGCGGCGGCCTCTCT...................................................................................................................................................................................................................................191.000.00---------------------1.00---------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................GTCCTCCTCCTCCCCCTTCT..................................................201.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................GCCGGCATGCTGGAGACG181.000.00-------------------------------------------------------------1.00-----------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TGGGACCCGCGGAAG................1511.001.00-------------------------------------------1.00-----------------------------------------------------------------------------------------------------
......................................................................................................................................CGAGCCCGCCGGCCGGGGA.................................................................................................1911.001.00-------------------------------------------------------------------------------------------------------------------------1.00-----------------------
..............................................................................................................................................CCGGCCGGGGACGAGCGTCGCAG.....................................................................................2311.001.00-----------------------------------------------------------1.00-------------------------------------------------------------------------------------
....................................................................................................................................................................................GTCCTCCTCCTCCCC.......................................................1501.001.00----------------------------------------------------1.00--------------------------------------------------------------------------------------------
...................................................................................................................................................................AGCTCATGCTGATCGCTGTCC..................................................................2111.001.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................GCGCTCGGCCGGCCGCGAT................................................................................................................191.000.00----------------------------------------------------------------------------------------------------------------------------1.00--------------------
...........................................................................................................................................................................................TCCTCCCCCTCAGGCGGCG............................................1911.001.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------
....CGGCGGCGGCGGCCTCGAT...................................................................................................................................................................................................................................191.000.00----------------------------------------------------------------------------------------------------------------------------------1.00--------------
........................................................................................................................................................................................................GCGGCGCTGGCGGCGGAGGG..............................201.000.00-------------1.00-----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................CCCCAGCGCTCGGCCGGC......................................................................................................................1811.001.00----------------------------------------------------------------------------------------------------------------------------------------1.00--------
.........................................................................................................................................................CGAGCGTCGCAGCTCATGC..............................................................................1911.001.00-----------------------------------------------------------------1.00-------------------------------------------------------------------------------
...............................................................................................................................................CGGCCGGGGACGAGCGTC.........................................................................................1811.001.00-------------------------------------1.00-----------------------------------------------------------------------------------------------------------
...........................................................................................................................................CCGCCGGCCGGGGACGAG.............................................................................................1811.001.00-------------------------------------1.00-----------------------------------------------------------------------------------------------------------
.............................................TCCGCCCCCGGCCCCCCGTC.........................................................................................................................................................................................201.000.00---------------------------------------------------------------------------------------------------------------1.00---------------------------------
....................................................................................................................................................................................GTCCTCCTCCTCCCCCTTATC.................................................211.000.00-----------------------------------------------------------------------------------------------------------------------------1.00-------------------
....................................................................................................................CCAGCGCTCGGCCGG.......................................................................................................................1540.250.25----------------------------------------------------------------------------------------------------------------------------------------------0.25--
........................................................................CCCCTGCCAGGCCCCTCC................................................................................................................................................................1840.250.25------------------------------------------------------------------0.25------------------------------------------------------------------------------
...............GCCTCGGGCGGGTGG............................................................................................................................................................................................................................1550.200.20-----------------------------------------------------------------------------------------------------------------------------------------------0.20-
.........................................................................................................................................................................................................CGGCGCTGGCGGCGGC.................................1690.110.11---------------------------------------------0.11---------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................CGGCGCTGGCGGCGGCGGT..............................1990.110.11--------------------------------------------0.11----------------------------------------------------------------------------------------------------

Antisense strand
GCGGCGGCGGCGGCGGCCTCGGGCGGGTGGGGGCAGCGCTCCCGCTCCGCCCCCGGCCCCCGCTGCCCGCGTCCCCTGCCAGGCCCCTCCTCCCGGCGGCGCGGCAGAGCCAGGCCCCAGCGCTCGGCCGGCCGCGAGCCCGCCGGCCGGGGACGAGCGTCGCAGCTCATGCTGATCGCTGTCCTCCTCCTCCCCCTCAGGCGGCGCTGGCGGCGGCCCTGGGACCCGCGGAAGCCGGCATGCTGGAGAA
...............................................................................................................(((.......((.((((.(((.....))).)))))).((((((.((((...((((....))))..))))))))))........))).....................................................
.............................................................................................................110.......................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR040028(GSM532913)
G026N. (cervix)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040019(GSM532904)
G701T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040037(GSM532922)
G243T. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR040007(GSM532892)
G601T. (cervix)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR040009(GSM532894)
G727T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040041(GSM532926)
G612T. (cervix)
GSM532889(GSM532889)
G576N. (cervix)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR191485(GSM715595)
123genomic small RNA (size selected RNA from . (breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR040011(GSM532896)
G529T. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR040036(GSM532921)
G243N. (cervix)
TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
GSM532890(GSM532890)
G576T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040025(GSM532910)
G613T. (cervix)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
TAX577590(Rovira)
total RNA. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040014(GSM532899)
G623N. (cervix)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR343335SRR038860(GSM458543)
MM426. (cell line)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR040032(GSM532917)
G603N. (cervix)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532887(GSM532887)
G761N. (cervix)
SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)
SRR040043(GSM532928)
G428T. (cervix)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)
SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR040035(GSM532920)
G001T. (cervix)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
....................................................................................................................................................................................GTCCTCCTCCTCCCCGGAC................................................... 1902.000.00--------------------------------------------------------------------------------1.00----------------------------------1.00-----------------------------
.........................................................................................................................................GCCCGCCGGCCGGGGG................................................................................................. 162.000.00---------------------------1.00---------------------------------------------------1.00-----------------------------------------------------------------
.........GCGGCGGCCTCGGGCGTC............................................................................................................................................................................................................................... 181.000.00----------------------1.00--------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GCCCGCCGGCCGGGGGGG............................................................................................... 181.000.00-----------------------------------------------------------------------------------------------1.00-------------------------------------------------
........................................................................................................................................TCCCCGGCCGGCGGGCT................................................................................................. 1711.001.00----------------------------------------------------------------------------------------------------1.00--------------------------------------------
.........................................................................................................................................CGTCCCCGGCCGGCGGGC............................................................................................... 1811.001.00---------------------------------------------------------------------------------------------------------------------------1.00---------------------
....................................CGCTCCCGCTCCGCCTGT.................................................................................................................................................................................................... 181.000.00-------------------------------------------------------------------------------------------------------------1.00-----------------------------------
...........................................................................................CCCGGCGGCGCGGCAGGA............................................................................................................................................. 181.000.00--------------------------------------------------------------------------------------------------1.00----------------------------------------------
..................................................................................................................................GCCGCGAGCCCGCCGGGGG..................................................................................................... 191.000.00---------------------------1.00---------------------------------------------------------------------------------------------------------------------
.............................................TCCGCCCCCGGCCCCCTA........................................................................................................................................................................................... 181.000.00---------------------1.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................................................GCCCCAGCGCTCGGCCGTAC..................................................................................................................... 201.000.00-----------------------------------------------------------------------------------------------------------------------1.00-------------------------
.........................................................................................................................................GCCCGCCGGCCGGGGGGGC.............................................................................................. 191.000.00----------------------------1.00--------------------------------------------------------------------------------------------------------------------
......GCGGCGGCGGCCTCGGGA.................................................................................................................................................................................................................................. 181.000.00---------------------------1.00---------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CCTCCTCCTCCCCCTCAGGGGA.............................................. 221.000.00---------------------------------------------------------------------------------------------------------1.00---------------------------------------
....................................................................................................................................................................................GTCCTCCTCCTCCCCCTTA................................................... 191.000.00---------------------------------------------------------------------------------------------------1.00---------------------------------------------
.........................................................................................................................................GCCCGCCGGCCGGGGCGCC.............................................................................................. 191.000.00-------------------------------------------------------1.00-----------------------------------------------------------------------------------------
..............................................CCGCCCCCGGCCCCCTCC.......................................................................................................................................................................................... 181.000.00---------------------1.00---------------------------------------------------------------------------------------------------------------------------
.....................................................................................CCTCCTCCCGGCGGCGCCTG................................................................................................................................................. 201.000.00--------------------------------------------------------------------------1.00----------------------------------------------------------------------
...................................................................................................................................................................................TGAGGGGGAGGAGGAGGACA................................................... 2011.001.00-------------------------------------------------------------------------------------------------------------------------------------1.00-----------
..............................................CCGCCCCCGGCCCCCTGTG......................................................................................................................................................................................... 191.000.00--------------------------------------------------------------------------------------------1.00----------------------------------------------------
....................................................................................................................................................................................GTCCTCCTCCTCCCCCTCGT.................................................. 201.000.00-----------------------------------------------------------1.00-------------------------------------------------------------------------------------
....................................................................................................................................................................................GGGGAGGAGGAGGAC....................................................... 1501.001.00----------------------------------------------------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................TGAGGGGGAGGAGGAGGAC................................................... 1920.500.50--------------------------------------------------------------------------------------------------------------------------------------------0.50----
........................................GGGCCGGGGGCGGAGCGGG............................................................................................................................................................................................... 1920.500.50---------------------------------------------------------------------------------------------------------------------------------------------0.50---
...........................................GCGGGGGCCGGGGGCGGAGC........................................................................................................................................................................................... 2020.500.50------------------0.50------------------------------------------------------------------------------------------------------------------------------
.......................................GCCGGGGGCGGAGCGGGA................................................................................................................................................................................................. 1830.330.33-----------------------------------------------------------------0.33-------------------------------------------------------------------------------
.............................................................................................................................................TCGTCCCCGGCCGGC.............................................................................................. 1530.330.33---------------------------0.33---------------------------------------------------------------------------------------------------------------------
.....................................................................................GCCGCCGGGAGGAGG...................................................................................................................................................... 1580.120.12------------------------------------------------------------------------------------------------------------------------------------------------0.12