ID: uc011kpx.1_intron_4_0_chr7_134930082_f.5p
GENE: (5)
chr7:134930032-134930281+


(6)
B-CELL
(4)
BRAIN
(1)
BREAST
(19)
CELL-LINE
(6)
CERVIX
(1)
HELA
(4)
LIVER
(1)
OTHER
(3)
SKIN
(2)
UTERUS

Sense strand
TTTCCCAGCCTGCTTTCAAACAGTTTTCCTCAGAATGGTTCCTCCCCTTGGTGCCCAACTGAGGCAGTCAGGAAGGATGCTGAGGAGGAGGAAGATGAGGAAGAGGAAGATCAAGAAGAAGAGGAGGAGGAAGAAGAAGAGGAGGAGGAGGAAGAGGAGGAAGAGGAAGAGGAGGAGGAGGAAGAGGAGAAAAAAGTGATCTTATACTCCCCAGGAACTTTGTCGCCTGACCTCATGGAATTTGAACGGT

..................................................................................................................................131.......................................................189...........................................................
SizePerfect hitTotal NormPerfect NormDRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM532880(GSM532880)
G659T. (cervix)
SRR189782SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR189784TAX577580(Rovira)
total RNA. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR040026(GSM532911)
G220N. (cervix)
GSM532876(GSM532876)
G547T. (cervix)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189787GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040011(GSM532896)
G529T. (cervix)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343335GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR040015(GSM532900)
G623T. (cervix)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038862(GSM458545)
MM472. (cell line)
SRR040027(GSM532912)
G220T. (cervix)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
....................................................................................................................................................................GGAAGAGGAGGAGGAGGAAGA.................................................................210101.00101.0034.0034.0028.00--2.00--3.00------------------------------------------
....................................................................................................................................................................GGAAGAGGAGGAGGAGGAAG..................................................................20040.0040.0020.0012.006.00--2.00---------------------------------------------
.......................................................................................................................................GAAGAGGAGGAGGAGGAAGA...............................................................................................20028.0028.008.0010.0010.00------------------------------------------------
......................................................................................................................................................................AAGAGGAGGAGGAGGAAGA.................................................................1906.006.004.002.00-------------------------------------------------
..............................................................................................................................................AGGAGGAGGAAGAGGAGGAAATT.....................................................................................235.000.00----2.00-----3.00----------------------------------------
....................................................................................................................................................................GGAAGAGGAGGAGGAGGAA...................................................................1904.004.003.001.00-------------------------------------------------
...............................................................................................................................................GGAGGAGGAAGAGGAGGAAG.......................................................................................2003.003.001.001.001.00------------------------------------------------
...............................................................................................................................................GGAGGAGGAAGAGGAGGAAAT......................................................................................213.000.00------1.001.00--------------------------1.00----------------
...........................................................................................................................................................................GAGGAGGAGGAAGAGGAGATT..........................................................213.000.00------------2.00-------------------------1.00------------
...............................................................................................................................AGGAAGAAGAAGAGGAGGATC......................................................................................................213.000.00---------3.00-----------------------------------------
...............................................................................................................................................GGAGGAGGAAGAGGAGGAAGG......................................................................................2102.003.001.00--------------------------------------1.00-----------
.................................................................................................AGGAAGAGGAAGATCTTAA......................................................................................................................................192.000.00--------------------------1.00-----1.00------------------
..............................................................................................................................................................GGAAGAGGAAGAGGAGGAGGAG......................................................................2202.002.001.001.00-------------------------------------------------
.......................................................................................................................................GAAGAGGAGGAGGAGGAAGTAA.............................................................................................222.000.00----2.00----------------------------------------------
...................................................................................GGAGGAGGAAGATGAGGACAT..................................................................................................................................................212.000.00----2.00----------------------------------------------
.........................................................................................................................................................................AGGAGGAGGAGGAAGAGGCCC............................................................212.000.00---2.00-----------------------------------------------
...............................................................................................................................AGGAAGAAGAAGAGGAGGACG......................................................................................................212.000.00---2.00-----------------------------------------------
......................................................................................................................................................................AAGAGGAGGAGGAGGAAGAGCGAC............................................................242.000.00------2.00--------------------------------------------
........................................................................................................................................AAGAGGAGGAGGAGGAAGTT..............................................................................................202.000.00-------2.00-------------------------------------------
...................................................................................................................................................................AGGAAGAGGAGGAGGAGGAAGA.................................................................2202.002.001.00-1.00------------------------------------------------
..................................................................................AGGAGGAGGAAGATGGATT.....................................................................................................................................................192.000.00------------1.00------------------------------1.00-------
....................................................................................................................AGAAGAGGAGGAGGAAG.....................................................................................................................1702.002.00-1.001.00------------------------------------------------
..........................................................................................................................................................AGGAGGAAGAGGAAGAGGAGACGG........................................................................241.000.00---1.00-----------------------------------------------
..........................................................................................................................GGAGGAGGAAGAAGAAGACGAT..........................................................................................................221.000.00------------------1.00--------------------------------
...................................................................................GGAGGAGGAAGATGAGGCTC...................................................................................................................................................201.000.00-----------------------1.00---------------------------
...................................................................................................................................................................AGGAAGAGGAGGAGGAGGAA...................................................................2001.001.001.00--------------------------------------------------
.....................................................................................................................................AAGAAGAGGAGGAGGAGGACACG..............................................................................................231.000.00---1.00-----------------------------------------------
................................................................................................................................................GAGGAGGAAGAGGAGGAAGAGGT...................................................................................231.000.00--------------------1.00------------------------------
......................................................................................GGAGGAAGATGAGGAACCCC................................................................................................................................................201.000.00------------------------------------------1.00--------
...................................................................................................................................................GAGGAAGAGGAGGAAGAGTC...................................................................................2001.001.00--------------------------------------------1.00------
...............................................................................................................................................GGAGGAGGAAGAGGAGGAAGTTA....................................................................................2301.003.00-------------1.00-------------------------------------
......................................................................................................................................AGAAGAGGAGGAGGAGGAAGACG.............................................................................................231.000.00-----------1.00---------------------------------------
..................................................................................................GGAAGAGGAAGATCAAGATTT...................................................................................................................................211.000.00-------------1.00-------------------------------------
....................................................................................................AAGAGGAAGATCAAGGACT...................................................................................................................................191.000.00-------------------------------1.00-------------------
...................................................................................GGAGGAGGAAGATGAGGTCA...................................................................................................................................................201.000.00-----------------1.00---------------------------------
..............................................................................................................................GAGGAAGAAGAAGAGGAGGATGA.....................................................................................................231.000.00----------------1.00----------------------------------
.....................................................................AGGAAGGATGCTGAGTCG...................................................................................................................................................................181.000.00---------------1.00-----------------------------------
.................................................................................GAGGAGGAGGAAGATGAGGAAGACG................................................................................................................................................251.000.00---1.00-----------------------------------------------
....................................................................................................................................................................GGAAGAGGAGGAGGAGGAAGAGGA..............................................................2401.001.001.00--------------------------------------------------
.........................................................................................GGAAGATGAGGAAGACATA..............................................................................................................................................191.000.00----------------1.00----------------------------------
..................................................................................AGGAGGAGGAAGATGAGGGGC...................................................................................................................................................211.000.00---1.00-----------------------------------------------
................................................................................................................................................................AAGAGGAAGAGGAGGAGGAGGA....................................................................2201.001.001.00--------------------------------------------------
...............................................................................................................................................................................AGGAGGAAGAGGAGAAACC........................................................191.000.00------------------------1.00--------------------------
................................................................................................................................................................AAGAGGAAGAGGAGGAGGAG......................................................................2001.001.00--1.00------------------------------------------------
......................................................................................................................................AGAAGAGGAGGAGGAGGAAG................................................................................................2001.001.001.00--------------------------------------------------
...................................................................................................................................................................AGGAAGAGGAGGAGGAGGAAG..................................................................2101.001.001.00--------------------------------------------------
...................................................................................................................................................GAGGAAGAGGAGGAAGAG.....................................................................................1801.001.001.00--------------------------------------------------
.........................................................................AGGATGCTGAGGAGGATTT..............................................................................................................................................................191.000.00-----------------------------------1.00---------------
...............................................................................................................................................................GAAGAGGAAGAGGAGGAGGAGGA....................................................................2301.001.00--1.00------------------------------------------------
....................................................................................................................................................AGGAAGAGGAGGAAGAGGAAACGG..............................................................................241.000.00-----------1.00---------------------------------------
...................................................................................................................AAGAAGAGGAGGAGGAAG.....................................................................................................................1801.001.00--1.00------------------------------------------------
........................................................................................................................................................................GAGGAGGAGGAGGAAGAGGAGATTT.........................................................251.000.00---------------------------------1.00-----------------
...................................................................................................................................................................AGGAAGAGGAGGAGGAGGAAGATT...............................................................2401.002.00------------------------------1.00--------------------
..........................................................................................................................GGAGGAGGAAGAAGAAG...............................................................................................................1701.001.00--1.00------------------------------------------------
...........................................................................GATGCTGAGGAGGAGGAATAGA.........................................................................................................................................................221.000.00---------------------1.00-----------------------------
............................................................................................................................AGGAGGAAGAAGAAGACAC...........................................................................................................191.000.00-------------------------1.00-------------------------
.....................................................................................AGGAGGAAGATGAGGAAGAGGGAG.............................................................................................................................................241.000.00---1.00-----------------------------------------------
...........................................................................................................................GAGGAGGAAGAAGAAGACAC...........................................................................................................201.000.00-----------------------------1.00---------------------
...............................................................................................................................................................GAAGAGGAAGAGGAGGAGGAGGAA...................................................................2401.001.00--1.00------------------------------------------------
........................................................................................................................................AAGAGGAGGAGGAGGAAGAGGAGGCGGC......................................................................................281.000.00----------------------1.00----------------------------
.....................................................................................................................................AAGAAGAGGAGGAGGAGTTT.................................................................................................201.000.00-------1.00-------------------------------------------
..........................................................................................GAAGATGAGGAAGAGGAAGAG...........................................................................................................................................211.000.00---------------1.00-----------------------------------
...................................................................................................................................................................AGGAAGAGGAGGAGGAGGAAGATTT..............................................................2501.002.00----1.00----------------------------------------------
...............................................................................................................................................................GAAGAGGAAGAGGAGGAGGAGGAAGA.................................................................2601.001.00-1.00-------------------------------------------------
.....................................................................................AGGAGGAAGATGAGGACAGG.................................................................................................................................................201.000.00------1.00--------------------------------------------
...................................................................................GGAGGAGGAAGATGAGGAAGT..................................................................................................................................................211.000.00------------------------------------1.00--------------
....................................................................................................................................................................GGAAGAGGAGGAGGAGGAAGATA...............................................................2301.00101.00----1.00----------------------------------------------
......................................................................................................................AAGAGGAGGAGGAAGAAGAAGAGGCT..........................................................................................................261.000.00---1.00-----------------------------------------------
..........................................................................................................................GGAGGAGGAAGAAGAAGATTT...........................................................................................................211.000.00-------------------------------------1.00-------------
..................................................................................AGGAGGAGGAAGATGAGGAAGAGG................................................................................................................................................2430.330.33---------------------------------------------0.33-----
.............................................................................................GATGAGGAAGAGGAAGAT...........................................................................................................................................1840.250.25-------------------------------------------------0.25-
.....................................................................................AGGAGGAAGATGAGGAAGAGGA...............................................................................................................................................2240.250.25-----------------------------------------------0.25---
...................................................................................GGAGGAGGAAGATGAGGAAGAG.................................................................................................................................................2240.250.25------------------------------------------------0.25--
...................................................................................................................................................................AGGAAGAGGAGGAGGAGGAAGAGGAGA............................................................2790.220.22---0.22-----------------------------------------------
...................................................................................GGAGGAGGAAGATGAGGAAGA..................................................................................................................................................2180.120.12--------------------------------------------------0.12
...............................................................................................................................................GGAGGAGGAAGAGGAGGAAGAGGAA..................................................................................2580.120.120.12--------------------------------------------------
..........................................................................................................................................................................GGAGGAGGAGGAAGAGGAGAAAAA........................................................2480.120.12-----------------0.12---------------------------------
...........................................................................................AAGATGAGGAAGAGGAAG.............................................................................................................................................1890.110.11------------------0.11--------------------------------

Antisense strand
TTTCCCAGCCTGCTTTCAAACAGTTTTCCTCAGAATGGTTCCTCCCCTTGGTGCCCAACTGAGGCAGTCAGGAAGGATGCTGAGGAGGAGGAAGATGAGGAAGAGGAAGATCAAGAAGAAGAGGAGGAGGAAGAAGAAGAGGAGGAGGAGGAAGAGGAGGAAGAGGAAGAGGAGGAGGAGGAAGAGGAGAAAAAAGTGATCTTATACTCCCCAGGAACTTTGTCGCCTGACCTCATGGAATTTGAACGGT

..................................................................................................................................131.......................................................189...........................................................
SizePerfect hitTotal NormPerfect NormDRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM532880(GSM532880)
G659T. (cervix)
SRR189782SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR189784TAX577580(Rovira)
total RNA. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR040026(GSM532911)
G220N. (cervix)
GSM532876(GSM532876)
G547T. (cervix)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189787GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040011(GSM532896)
G529T. (cervix)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343335GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR040015(GSM532900)
G623T. (cervix)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038862(GSM458545)
MM472. (cell line)
SRR040027(GSM532912)
G220T. (cervix)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
........................................................................................................................................AAGAGGAGGAGGAGGAAGAC.............................................................................................. 202.000.00--------------2.00------------------------------------
.................................................................AGTCAGGAAGGATGCTGATTGC................................................................................................................................................................... 221.000.00---------------------------1.00-----------------------
.....................................GTTCCTCCCCTTGGTACGG.................................................................................................................................................................................................. 191.000.00----------------------------1.00----------------------
....................................................GCCCAACTGAGGCAGTGGA................................................................................................................................................................................... 191.000.00-------------------1.00-------------------------------
...................................TGGTTCCTCCCCTTGGTCGGT.................................................................................................................................................................................................. 211.000.00----------------------------------------1.00----------
.TTCCCAGCCTGCTTTGGG....................................................................................................................................................................................................................................... 181.000.00---1.00-----------------------------------------------
...............................................................................................................................................GGAGGAGGAAGAGGAGGAAGAGGACGG................................................................................ 271.000.00-----------1.00---------------------------------------
............................................................................................................................................GGAGGAGGAGGAAGAGGAGGAACAGC.................................................................................... 261.000.00---1.00-----------------------------------------------
..........................................................................GGATGCTGAGGAGGAGAG.............................................................................................................................................................. 181.000.00-----------------------------------------1.00---------
..................................................................................CCTCTTCCTCATCTTCCTCCTCCT................................................................................................................................................ 2430.330.33----------------------------------------------0.33----