ID: uc011kpw.1_intron_0_0_chr7_134671453_f.5p
GENE: (1)
chr7:134671403-134671652+


(1)
AGO2.ip 		(8)
B-CELL 		(6)
BREAST 		(11)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(3)
HEART 		(1)
HELA 		(6)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(11)
SKIN 		(1)
XRN.ip

Sense strand
GCCAGAGGACTCGCGTGGGAGCGAGGTGCCGGCCCCGACAGGACGGTGAGGTATGCAGAAGTAAGGCGGGGCGCCCCCTGCGGGAAGCGAGCGCGCCCCGGAAAATGAGCGCCTCCCCACACCAAGGTGTCCAGGAGTGAGTGCGGGAAGGAACTCGGCCGCCCGGAGTTGTGGCCTCATCGTGCTTCCCGCCAAAAACGCCTTGGTACTGTCGGGACGCGGCTAAGCGTGGACGCGCCCGCATCTGCCC
..................................................................................................(((....((((..(((.(((.(((((.((...)).....)).))).))).)))..)))).))).........................................................................................
...........................................................................................92.....................................................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029127(GSM416756)
A549. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR040028(GSM532913)
G026N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040031(GSM532916)
G013T. (cervix)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		TAX577579(Rovira)
total RNA. (breast)		GSM532882(GSM532882)
G696T. (cervix)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		SRR343335
..............................................................................................................................................GCGGGAAGGAACTCGGC...........................................................................................1719.009.008.00-----------------------------------------1.00----------
............................................................................................................................................GTGCGGGAAGGAACTCGGC...........................................................................................1916.006.006.00----------------------------------------------------
..........................................................................................................................................GAGTGCGGGAAGGAACTC..............................................................................................1815.005.003.00---2.00------------------------------------------------
................................................................................................CCCGGAAAATGAGCGCCTCCC.....................................................................................................................................2115.005.00-5.00---------------------------------------------------
............................................................................................................................................GTGCGGGAAGGAACTCGGCC..........................................................................................2014.004.00------3.00---------1.00------------------------------------
.............................................................................................................................................TGCGGGAAGGAACTCGGC...........................................................................................1813.003.002.001.00---------------------------------------------------
..............................................................................................................................................GCGGGAAGGAACTCGGCCG.........................................................................................1913.003.00---3.00-------------------------------------------------
...............................................................................................................................................................................................................ACTGTCGGGACGCGGCTAAG.......................2013.003.00--3.00--------------------------------------------------
..................................................................................................................................................................................................................GTCGGGACGCGGCTAAGC......................1813.003.003.00----------------------------------------------------
..........................................................................................................................................GAGTGCGGGAAGGAACTCGGC...........................................................................................2112.002.00--------1.00---------------------1.00----------------------
................................................................................................................................................GGGAAGGAACTCGGCCGCC.......................................................................................1912.002.00-2.00---------------------------------------------------
..................................................................................................CGGAAAATGAGCGCCTCCC.....................................................................................................................................1912.002.00---------2.00-------------------------------------------
............................................................................................................................AGGTGTCCAGGAGTGAGTG...........................................................................................................1912.002.00---------------------1.00-----------1.00-------------------
.........................................................................................................................................................................................................CTTGGTACTGTCGGGACGCGGCTAA........................2512.002.00-------------------------1.00-----------1.00---------------
....................................GACAGGACGGTGAGGTATGCAG................................................................................................................................................................................................2212.002.00----------2.00------------------------------------------
...........................................CGGTGAGGTATGCAGAAGTAAGG........................................................................................................................................................................................2312.002.00-------2.00---------------------------------------------
......................................CAGGACGGTGAGGTATGC..................................................................................................................................................................................................1811.001.00------------------------------------1.00----------------
..........................................................................................................................................................................................................TTGGTACTGTCGGGACGCGGCT..........................2211.001.00-----------------------------------------1.00-----------
................................................................................................................................................GGGAAGGAACTCGGCCGC........................................................................................1811.001.00-------1.00---------------------------------------------
...............................................................................................................................................................CGCCCGGAGTTGTGGCCTCATCGTG..................................................................2511.001.00------------1.00----------------------------------------
..........................................................................................................................................................................................................................GCGGCTAAGCGTGGACGC..............1811.001.00--------------------------------1.00--------------------
.................................................GGTATGCAGAAGTAAGGC.......................................................................................................................................................................................1811.001.00--------------1.00--------------------------------------
......GGACTCGCGTGGGAGCGAGGTGCCGG..........................................................................................................................................................................................................................2611.001.00----1.00------------------------------------------------
..................................................................................................CGGAAAATGAGCGCC.........................................................................................................................................1511.001.00-----------------------------------------------1.00-----
............................................................................................................................................GTGCGGGAAGGAACTCGGCCGCCCGGA...................................................................................2711.001.00----------------------------------------1.00------------
.............................................................................................................................................................................................................GTACTGTCGGGACGCGGCTAAG.......................2211.001.00------------------------1.00----------------------------
...........................................................................................................................................AGTGCGGGAAGGAACTCGGC...........................................................................................2011.001.00-----1.00-----------------------------------------------
.......................................AGGACGGTGAGGTATGCAG................................................................................................................................................................................................1911.001.00--------------------------------------------------1.00--
.....................................................................................................AAAATGAGCGCCTCCCCACAC................................................................................................................................2111.001.00---------------------------1.00-------------------------
..............................................................................................................................................GCGGGAAGGAACTCGGCCGC........................................................................................2011.001.00-----1.00-----------------------------------------------
..............................................................................................................................GTGTCCAGGAGTGAGTGCGGGAAGGAACTCGGC...........................................................................................3311.001.00-----------------1.00-----------------------------------
.....................................................................................................................................................................................................ACGCCTTGGTACTGTCGGGACGCGGCT..........................2711.001.00---------------1.00-------------------------------------
................................................................................................................................GTCCAGGAGTGAGTGCGGGAAGGAACT...............................................................................................2711.001.00------------1.00----------------------------------------
..................................CCGACAGGACGGTGAGGTAT....................................................................................................................................................................................................2011.001.00--------------------------------------------1.00--------
....................................................................................................................................AGGAGTGAGTGCGGGAAG....................................................................................................1811.001.00-----------------------------------1.00-----------------
...................................................................................................................................CAGGAGTGAGTGCGGGAAG....................................................................................................1911.001.00------------------1.00----------------------------------
...........................................................................................................................................AGTGCGGGAAGGAACTCGGCCGCC.......................................................................................2411.001.00--------------1.00--------------------------------------
...................................CGACAGGACGGTGAGGTAT....................................................................................................................................................................................................1911.001.00-----------1.00-----------------------------------------
........................................................................................................................................GTGAGTGCGGGAAGGAACTCGG............................................................................................2211.001.00--------1.00--------------------------------------------
..................................................................................................................................CCAGGAGTGAGTGCGGGAC.....................................................................................................191.000.00-------------------------------------------1.00---------
.....................................................................................................................................................................................................ACGCCTTGGTACTGTCGGGACGCGGGT..........................271.000.00-----------------------1.00-----------------------------
.................................................................................................................................................................................CATCGTGCTTCCCGCGCTC......................................................191.000.00--------------------------1.00--------------------------
...............................................................................................................................................CGGGAAGGAACTCGGCA..........................................................................................171.000.00---------------------------------------1.00-------------
................................................................................................CCCGGAAAATGAGCGCCTC.......................................................................................................................................1911.001.00---------------------------------------------1.00-------
.................................................................................................CCGGAAAATGAGCGCCTCCCC....................................................................................................................................2111.001.00-----------------------------1.00-----------------------
............................................................................................................................................................................................................GGTACTGTCGGGACGCGGC...........................1911.001.00-------------------------------1.00---------------------
...............................................................................................................................................................................................................ACTGTCGGGACGCGGCT..........................1711.001.00------------------------------------------------1.00----
....................................................................................................................................................................................................................CGGGACGCGGCTAAGCGTGGACA...............231.000.00----------------------1.00------------------------------
....................................................................................................................................................................................................AACGCCTTGGTACTGTCGGGACGCGG............................2611.001.00---------------1.00-------------------------------------
.............................................................................................................................................................................................................GTACTGTCGGGACGCGGC...........................1811.001.00--1.00--------------------------------------------------
.................................................................................................................................TCCAGGAGTGAGTGCGGGAAGGAAC................................................................................................2511.001.00--------------------------------------1.00--------------
.............................................................................................................................GGTGTCCAGGAGTGAGTG...........................................................................................................1811.001.00-----------1.00-----------------------------------------
........................................................................................................................ACCAAGGTGTCCAGGAGTGAG.............................................................................................................2111.001.00--------1.00--------------------------------------------
...........................................................................................................................AAGGTGTCCAGGAGTGAGTG...........................................................................................................2011.001.00----------------------------------1.00------------------
..............................................................................................................................................................................................................TACTGTCGGGACGCGGCTCA........................201.000.00--1.00--------------------------------------------------
..............................................................................................................................................................................................................TACTGTCGGGACGCGGC...........................1711.001.00-----1.00-----------------------------------------------
................................................................................................................................................................................................................CTGTCGGGACGCGGCTAAA.......................191.000.00-------------------------------------------------1.00---
................................................................................................................................................GGGAAGGAACTCGGC...........................................................................................1520.500.50----------------------------------------------------0.50

Antisense strand
GCCAGAGGACTCGCGTGGGAGCGAGGTGCCGGCCCCGACAGGACGGTGAGGTATGCAGAAGTAAGGCGGGGCGCCCCCTGCGGGAAGCGAGCGCGCCCCGGAAAATGAGCGCCTCCCCACACCAAGGTGTCCAGGAGTGAGTGCGGGAAGGAACTCGGCCGCCCGGAGTTGTGGCCTCATCGTGCTTCCCGCCAAAAACGCCTTGGTACTGTCGGGACGCGGCTAAGCGTGGACGCGCCCGCATCTGCCC
..................................................................................................(((....((((..(((.(((.(((((.((...)).....)).))).))).)))..)))).))).........................................................................................
...........................................................................................92.....................................................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029127(GSM416756)
A549. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR040028(GSM532913)
G026N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040031(GSM532916)
G013T. (cervix)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		TAX577579(Rovira)
total RNA. (breast)		GSM532882(GSM532882)
G696T. (cervix)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		SRR343335
................................................................................................AGGCGCTCATTTTCCGGG........................................................................................................................................ 1812.002.00-------------2.00---------------------------------------
.............................................................................................................................................................................TTTTTGGCGGGAAGCACGATGAGGC.................................................... 2511.001.00-------------------1.00---------------------------------
..........................................................................................................TGGTGTGGGGAGGCGCTC.............................................................................................................................. 1811.001.00--------------------1.00--------------------------------
.......................................................................................................CTTGGTGTGGGGAGGCGCTCATT............................................................................................................................ 2311.001.00----------------------------------------------1.00------
.........................................................................................................................ACTCACTCCTGGACACCTTGG............................................................................................................ 2111.001.00----------------1.00------------------------------------
...............................................................................................................ACACCTTGGTGTGGGGAGG........................................................................................................................ 1911.001.00----------------------------1.00------------------------
.......................................................................................................................CTCCTGGACACCTTGGTG................................................................................................................. 1820.500.50---------------------------------------------------0.50-