ID: uc011kof.1_intron_1_0_chr7_126086427_r.3p
GENE: GRM8(10)
chr7:126086377-126086626-


(10)
CELL-LINE
(2)
CERVIX
(2)
HEART
(2)
OTHER
(1)
TESTES
(1)
UTERUS

Sense strand
TAAAAAAATAACCTTACTCATTTACATTTGCAGGTTAGGACACAGGAATGGTTGACTATAATTAAGGACAATTTCAATAAGTGCCTTTTAATGTGCCTTTAGCAGAGAAGCTGGAACAATTTTAGAAAATAGTATGTTATTTGCTTTATCTCCTACTGTTAGGCTTACCAACAGTGATTCTTTTTTTTTTCTTCCCTCAGATGTACATCCAGACAACAACACTTACTGTCTCCATGAGTTTAAGTGCTTC
.........................................................................................................................................................(((((((.((....)))))))))..........................................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189783SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR040016(GSM532901)
G645N. (cervix)
SRR040031(GSM532916)
G013T. (cervix)
SRR553576(SRX182782)
source: Testis. (testes)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
..................................................................................................................................................................................TCTTTTTTTTTTCTTCCCTCTTG.................................................2316.000.00-3.00-3.007.001.00-1.001.00---------
................................................................................................................................................TTTATCTCCTACTGTAATG.......................................................................................1914.000.0014.00-----------------
....................................................................................................................................................................................TTTTTTTTTTCTTCCCTCAAAT................................................224.000.00-2.00-2.00--------------
.....................................................................................................................................ATGTTATTTGCTTTAGGTT..................................................................................................194.000.00------4.00-----------
...................................................................................................................................................................................CTTTTTTTTTTCTTCCCTCAAAG................................................233.000.00-1.00-2.00--------------
.................................................................................................................................................................................TTCTTTTTTTTTTCTTCCCATTT..................................................232.000.00--2.00---------------
..................................................................................................................................................................................TCTTTTTTTTTTCTTCCCTCTTT.................................................232.000.00----2.00-------------
..........................................................................................................................................................................ACAGTGATTCTTTTTTTTTTG...........................................................212.000.00--2.00---------------
............................................................................................................................................................................AGTGATTCTTTTTTTTTTGGA.........................................................212.000.00-----2.00------------
.....................................................................................................................................................................................TTTTTTTTTCTTCCCGCCC..................................................191.000.00--1.00---------------
....................................................................................................................................................................................TTTTTTTTTTCTTCCCTCCAAG................................................221.000.00-1.00----------------
..................................................................................................................................................................................TCTTTTTTTTTTCTTCCACAT...................................................211.000.00-1.00----------------
.....................................................................................................................................................................................TTTTTTTTTCTTCCCTCGAAG................................................211.000.00-------1.00----------
........................................................................................................GAGAAGCTGGAACAACTC................................................................................................................................181.000.00-----------1.00------
.....................................................................................................................................................................................TTTTTTTTTCTTCCCTCAAAA................................................211.000.00-1.00----------------
................................GGTTAGGACACAGGAC..........................................................................................................................................................................................................161.000.00---------1.00--------
...................................................................................................................................................................................CTTTTTTTTTTCTTCCCTCACA.................................................221.000.00--------1.00---------
................................................................................................................................................................................ATTCTTTTTTTTTTCGGC........................................................181.000.00--1.00---------------
.................................................................................................................................................................................TTCTTTTTTTTTTCTTCGG......................................................191.000.00--1.00---------------
..................................................................................................................................................................................TCTTTTTTTTTTCTTCCCTCTTA.................................................231.000.00-------1.00----------
....................................................................................................................................................................................TTTTTTTTTTCTTCCCTCAATG................................................221.000.00-1.00----------------
.....................................................................................................................................................................................TTTTTTTTTCTTCCCTCTCTG................................................211.000.00---1.00--------------
..........................................................................................................................................................................ACAGTGATTCTTTTTTTTTTTG..........................................................221.000.00-----1.00------------
..........................................................................................................................................................................ACAGTGATTCTTTTTTTTTTTTG.........................................................231.000.00-----1.00------------
............................................................................................................................................................................AGTGATTCTTTTTTTTTTCTTTTGA.....................................................251.000.00-----1.00------------
.............................................................................................................................................................................GTGATTCTTTTTTTTTTGGCG........................................................211.000.00--1.00---------------
.....................................GGACACAGGAATGGTTGAAGCA...............................................................................................................................................................................................221.000.00----------1.00-------
.................................................................................................................................................................................TTCTTTTTTTTTTCTTCGGC.....................................................201.000.00--1.00---------------
..............................................................................................................................................................................TGATTCTTTTTTTTTTCGAG........................................................201.000.00--1.00---------------
...................................................................................................................................................................................CTTTTTTTTTTCTTCCGCTT...................................................201.000.001.00-----------------
.....................................................................................................................................................................................TTTTTTTTTCTTCCCTCAAAT................................................211.000.00-1.00----------------
.....................................................................................................................................................................................TTTTTTTTTCTTCCCTCACAG................................................211.000.00-1.00----------------
..................................................................................................................................................................................TCTTTTTTTTTTCTTCCCTCAAAG................................................241.000.00---1.00--------------
.................................................................................................................................................................................TTCTTTTTTTTTTCTTCGGAG....................................................211.000.00-----1.00------------
.............................................................................................................GCTGGAACAATTTTAGGT...........................................................................................................................181.000.00------------1.00-----
..............................CAGGTTAGGACACAG.............................................................................................................................................................................................................1590.110.11-----------------0.11

Antisense strand
TAAAAAAATAACCTTACTCATTTACATTTGCAGGTTAGGACACAGGAATGGTTGACTATAATTAAGGACAATTTCAATAAGTGCCTTTTAATGTGCCTTTAGCAGAGAAGCTGGAACAATTTTAGAAAATAGTATGTTATTTGCTTTATCTCCTACTGTTAGGCTTACCAACAGTGATTCTTTTTTTTTTCTTCCCTCAGATGTACATCCAGACAACAACACTTACTGTCTCCATGAGTTTAAGTGCTTC
.........................................................................................................................................................(((((((.((....)))))))))..........................................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189783SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR040016(GSM532901)
G645N. (cervix)
SRR040031(GSM532916)
G013T. (cervix)
SRR553576(SRX182782)
source: Testis. (testes)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
...............................................................................................................TGGAACAATTTTAGAAAC......................................................................................................................... 181.000.00--------1.00---------
....................................................................................................................................................................................GGGAAGAAAAAAAAAA...................................................... 1601.001.00---------1.00--------
............................................................................................................................GAAAATAGTATGTTATTACTG......................................................................................................... 211.000.001.00-----------------
......................................................................................................................................................................................CTGAGGGAAGAAAAAAAA.................................................. 1870.430.43-------------0.140.14-0.14-
.....................................................................................................................................................................................TGAGGGAAGAAAAAAAAA................................................... 1870.140.14---------------0.14--