ID: uc011klh.1_intron_0_0_chr7_102389624_f
GENE: (1)
chr7:102389574-102389899+


(3)
AGO2.ip 		(6)
B-CELL 		(2)
BRAIN 		(14)
BREAST 		(29)
CELL-LINE 		(3)
CERVIX 		(2)
HEART 		(3)
HELA 		(6)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(19)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
ACAGTGGCCAAGTCGATTGGCCGTGGCAAGTGACCCTCCCTGTGGCTGAAGTGTTCTGAGGACTGGCGAGAGAGGCGCGCCATGCTTGCCCCCTGCTCAGGTTGGGAGCTTGGCTGCTTCCGTCTCTGTCTCCGTCAGGTCCGACTGTGGGCTGGCGCTGGGCGCTGGGCTTGCTGGGCTTGCCAAGCCAGGCCGTACAGCTCAGGTGGGAGCGAGCGCTGGCCCGGATCGGAGACTGAGGTCCCTCCGCCTGGCCCGGGGCGCCGAACTCTGAAGGAGTGGACACTGCAGGTGAGCCCGTTTGGTCGGCTGCGGGCGCGGCTCCC
.......................................................(((((((..(((((((((((((.((((.(((..((((((....)))..)))))).))))))))))..)))).)))))).))))(((((....)))))..............................................................................................................................................................................
..................................................51...................................................................................................152............................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577453(Rovira)
total RNA. (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR038854(GSM458537)
MM653. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM532886(GSM532886)
G850T. (cervix)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR029124(GSM416753)
HeLa. (hela)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191457(GSM715567)
27genomic small RNA (size selected RNA from t. (breast)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)		SRR038863(GSM458546)
MM603. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029131(GSM416760)
MCF7. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
..........................................................AGGACTGGCGAGAGAGGCG.........................................................................................................................................................................................................................................................1925.005.00--1.00--------0.50----1.00------0.50--------------0.500.50------0.50------------------------------0.50----------
.......................................................................................................................................CAGGTCCGACTGTGGGCTGGC..........................................................................................................................................................................2124.004.00-2.501.50-------------------------------------------------------------------------------------
.........................................................GAGGACTGGCGAGAGAGGCG.........................................................................................................................................................................................................................................................2024.004.00--0.50-------2.00----------------------------------0.50-----------0.50------0.50-----------------------
........................................................................................................................................AGGTCCGACTGTGGGCTGGC..........................................................................................................................................................................2023.503.50-2.50------------------------------------------------0.50------------------------0.50------------
..................................................GTGTTCTGAGGACTGGCGAGAGA.............................................................................................................................................................................................................................................................2323.503.50------3.50---------------------------------------------------------------------------------
..................................................................................................AGGTTGGGAGCTTGGCTG..................................................................................................................................................................................................................1823.003.00-0.50----------------1.50-------------------0.50------------------------------------------0.50------
..................................................................................................................................................GTGGGCTGGCGCTGGGCG..................................................................................................................................................................1822.502.50-2.50--------------------------------------------------------------------------------------
.......................................................CTGAGGACTGGCGAGAGAGGC..........................................................................................................................................................................................................................................................2122.502.500.50----------------------------------------1.00----0.50--------------------------------------0.50--
..................................................................................................................................................GTGGGCTGGCGCTGGGCAAG................................................................................................................................................................202.000.002.00---------------------------------------------------------------------------------------
......................................................TCTGAGGACTGGCGAGAGAGGC..........................................................................................................................................................................................................................................................2221.501.50--------------------1.50-------------------------------------------------------------------
..........................................................AGGACTGGCGAGAGAGGCGCG.......................................................................................................................................................................................................................................................2121.501.50-----------0.50-----------0.50---------------------------------------0.50------------------------
..........................................................AGGACTGGCGAGAGAGGC..........................................................................................................................................................................................................................................................1821.501.50-----------0.50-------------0.50------------------0.50-------------------------------------------
........................................TGTGGCTGAAGTGTTCTGAGGACTGGC...................................................................................................................................................................................................................................................................2721.501.50---1.50------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................CGTTTGGTCGGCTGCGG...........1711.001.00-------------------1.00--------------------------------------------------------------------
...................................................................................................................................................TGGGCTGGCGCTGGGCGCTGGGCTTGCTGGGCC..................................................................................................................................................331.000.00-----1.00----------------------------------------------------------------------------------
..........................................................AGGACTGGCGAGAGAGGCGC........................................................................................................................................................................................................................................................2021.001.00--------0.50-----------------------------------------------------------------0.50-------------
..........................................TGGCTGAAGTGTTCTGAGGACTGCC...................................................................................................................................................................................................................................................................251.000.00---1.00------------------------------------------------------------------------------------
..........AGTCGATTGGCCGTGGCA..........................................................................................................................................................................................................................................................................................................1821.001.00------------------------------------1.00---------------------------------------------------
.................................................................................................................................................................................................................................................................GGGGCGCCGAACTCTG.....................................................1611.001.00------------------------------------------------1.00---------------------------------------
........................................................................................................................................AGGTCCGACTGTGGGTTGG...........................................................................................................................................................................191.000.00--------------1.00-------------------------------------------------------------------------
............................................................................................CTGCTCAGGTTGGGAGCTTGGCTGC.................................................................................................................................................................................................................2511.001.001.00---------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................TGCGGGCGCGGCTCCCTC181.000.00-----------------------------------1.00----------------------------------------------------
.......................................................CTGAGGACTGGCGAGAGAGGCG.........................................................................................................................................................................................................................................................2221.001.00----------------------0.50---------------------------------------------------------------0.50-
..........................................................................................................................................................GCGCTGGGCGCTGGGCTTGCTGGGC...................................................................................................................................................2511.001.00-------1.00--------------------------------------------------------------------------------
............................................................................................CTGCTCAGGTTGGGAGCT........................................................................................................................................................................................................................1811.001.00-------------------------------------------------1.00--------------------------------------
................................................AAGTGTTCTGAGGACTGGCGAGAGAGG...........................................................................................................................................................................................................................................................2721.001.00-------------------------------------0.50----------------------------------------0.50---------
...............................................GAAGTGTTCTGAGGACTGGCGA.................................................................................................................................................................................................................................................................2221.001.001.00---------------------------------------------------------------------------------------
.......................................................CTGAGGACTGGCGAGAGAGG...........................................................................................................................................................................................................................................................2021.001.00--------------------------------------------------------0.50-----------0.50-------------------
...............................................................................................................................................ACTGTGGGCTGGCGCTGGGCGCTGGGCTCG.........................................................................................................................................................301.000.00-----1.00----------------------------------------------------------------------------------
...GTGGCCAAGTCGATTGG..................................................................................................................................................................................................................................................................................................................1721.001.00-------------1.00--------------------------------------------------------------------------
.........................................................GAGGACTGGCGAGAGAGGCGCGTCA....................................................................................................................................................................................................................................................251.000.00---------------1.00------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................AAGGAGTGGACACTGCAGGTTTA..............................231.000.00------------------------------------------1.00---------------------------------------------
......................................................TCTGAGGACTGGCGAGAGAGGCGCGC......................................................................................................................................................................................................................................................2621.001.00---1.00------------------------------------------------------------------------------------
.....................................................................................................................................GTCAGGTCCGACTGTGGGCTGGCGCTGGGC...................................................................................................................................................................3021.001.00------------1.00---------------------------------------------------------------------------
......................................................TCTGAGGACTGGCGAGAGAGGCGCGCCACG..................................................................................................................................................................................................................................................301.000.00-----1.00----------------------------------------------------------------------------------
..............................................................CTGGCGAGAGAGGCGCGCCATA..................................................................................................................................................................................................................................................221.000.00---------------------------------1.00------------------------------------------------------
.......................................................................................................................................................................................................GCTCAGGTGGGAGCGCACC............................................................................................................191.000.00--------------------------------1.00-------------------------------------------------------
...................................................................................................................................................................GCTGGGCTTGCTGGGAGAT................................................................................................................................................191.000.00----------------------------1.00-----------------------------------------------------------
..............................................................................................................................................................................................GGCCGTACAGCTCAGTGCA.....................................................................................................................191.000.00-----------------------------------------------1.00----------------------------------------
............................................................................................................................................................................................................................................................................................................TTTGGTCGGCTGCGGGCGCGGC....2211.001.00------------------------1.00---------------------------------------------------------------
..............................................................................................................................................................................................................TGGGAGCGAGCGCTGGTGCG....................................................................................................201.000.00---------------------------1.00------------------------------------------------------------
.........................................................GAGGACTGGCGAGAGAGG...........................................................................................................................................................................................................................................................1821.001.00--------1.00-------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TGGCCCGGATCGGAGACT.........................................................................................1821.001.00--1.00-------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................GTGGACACTGCAGGTGAGCCAAA.........................2321.000.50---------------------1.00------------------------------------------------------------------
.....................................................................................................................................................................................GCCAAGCCAGGCCGTACAGCTCAGGTGGGA...................................................................................................................3011.001.00----1.00-----------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................GCTGCGGGCGCGGCTCCC1830.670.67-------------------------0.67--------------------------------------------------------------
....................................................................................................................................................................................................................CGAGCGCTGGCCCGGATCGGAGA...........................................................................................2320.500.50----------------0.50-----------------------------------------------------------------------
................................................AAGTGTTCTGAGGACTGG....................................................................................................................................................................................................................................................................1820.500.50----------------0.50-----------------------------------------------------------------------
........................................TGTGGCTGAAGTGTTCTGAGGAC.......................................................................................................................................................................................................................................................................2320.500.50---0.50------------------------------------------------------------------------------------
..............................................TGAAGTGTTCTGAGGAC.......................................................................................................................................................................................................................................................................1720.500.50----0.50-----------------------------------------------------------------------------------
.........AAGTCGATTGGCCGTGGCAAG........................................................................................................................................................................................................................................................................................................2120.500.50--------0.50-------------------------------------------------------------------------------
............................................GCTGAAGTGTTCTGAGGACTGGCGAGAG..............................................................................................................................................................................................................................................................2820.500.50-------0.50--------------------------------------------------------------------------------
.......................................................CTGAGGACTGGCGAGAGAG............................................................................................................................................................................................................................................................1920.500.50-------------0.50--------------------------------------------------------------------------
..............................................................................................................................................................................................................................CCCGGATCGGAGACTGAG......................................................................................1820.500.50-------------------0.50--------------------------------------------------------------------
..............................................TGAAGTGTTCTGAGGACTGGCGAGAGAG............................................................................................................................................................................................................................................................2820.500.50-------------------------------------------------------0.50--------------------------------
.........................................................GAGGACTGGCGAGAGAGGC..........................................................................................................................................................................................................................................................1920.500.500.50---------------------------------------------------------------------------------------
.............................................................................................................................................CGACTGTGGGCTGGCGCTGGGC...................................................................................................................................................................2220.500.50-----------------0.50----------------------------------------------------------------------
.................................................................................................CAGGTTGGGAGCTTGGCTG..................................................................................................................................................................................................................1920.500.50--------------------------------------------0.50-------------------------------------------
......................................................................................................................................................................................................................................................................GCCGAACTCTGAAGGAG...............................................1720.500.50----0.50-----------------------------------------------------------------------------------
........................................................................................................................................AGGTCCGACTGTGGGCTGGCGCTGGGCG..................................................................................................................................................................2820.500.50-----------------0.50----------------------------------------------------------------------
............................................................................................................................................CCGACTGTGGGCTGGCGCTGGG....................................................................................................................................................................2220.500.50--------------------------0.50-------------------------------------------------------------
.........AAGTCGATTGGCCGTGGCAAGT.......................................................................................................................................................................................................................................................................................................2220.500.50---------------0.50------------------------------------------------------------------------
...............................................................................................................................................................................................................................CCGGATCGGAGACTGAG......................................................................................1720.500.50-----------------------------------------------------------------0.50----------------------
...........................................................................................................................................TCCGACTGTGGGCTGGCGC........................................................................................................................................................................1920.500.50------------0.50---------------------------------------------------------------------------
............................................................GACTGGCGAGAGAGGCG.........................................................................................................................................................................................................................................................1720.500.50---------------------------------------------------------------------0.50------------------
.............................................CTGAAGTGTTCTGAGGACTG.....................................................................................................................................................................................................................................................................2020.500.50-------0.50--------------------------------------------------------------------------------
.....................................................TTCTGAGGACTGGCGAGAGAGGCGC........................................................................................................................................................................................................................................................2520.500.50---0.50------------------------------------------------------------------------------------
..................................................................................................AGGTTGGGAGCTTGGCTGCT................................................................................................................................................................................................................2020.500.50---------------------0.50------------------------------------------------------------------
........................GGCAAGTGACCCTCCCTGT...........................................................................................................................................................................................................................................................................................1920.500.50------------------------------------------------------0.50---------------------------------
......................................................................................................................................................................................................................................................................................GTGGACACTGCAGGTGAGCC............................2020.500.50----------------------------------------------------------0.50-----------------------------
........................................................TGAGGACTGGCGAGAGAGGCGCGC......................................................................................................................................................................................................................................................2420.500.50-----------0.50----------------------------------------------------------------------------
..........................................TGGCTGAAGTGTTCTGAG..........................................................................................................................................................................................................................................................................1820.500.50-----------------------0.50----------------------------------------------------------------
............................................GCTGAAGTGTTCTGAGGA........................................................................................................................................................................................................................................................................1820.500.50-------------------------------------------------------------------------------0.50--------
................................ACCCTCCCTGTGGCTGAAG...................................................................................................................................................................................................................................................................................1920.500.50------------------------------------------------------------------------------------0.50---
...........................................................................................................................................TCCGACTGTGGGCTGGC..........................................................................................................................................................................1720.500.50-------------------------------------------------------------------0.50--------------------
......................................................................................................................................................................................................................AGCGCTGGCCCGGATCGGAGA...........................................................................................2120.500.500.50---------------------------------------------------------------------------------------
..........................................................AGGACTGGCGAGAGAGG...........................................................................................................................................................................................................................................................1720.500.50----------------------------------------------------------------------------0.50-----------
...................................CTCCCTGTGGCTGAAGTGTTC..............................................................................................................................................................................................................................................................................2120.500.50------------------------------------------------------------------------0.50---------------
....................................................................................................................................CGTCAGGTCCGACTGTGGG...............................................................................................................................................................................1920.500.50-----------------0.50----------------------------------------------------------------------
...............................................................................................................................GTCTCCGTCAGGTCCGACTGTGGG...............................................................................................................................................................................2420.500.500.50---------------------------------------------------------------------------------------
........................................................................................................................................AGGTCCGACTGTGGGCTGGCGCTGGG....................................................................................................................................................................2620.500.50-----------------------------------------------------0.50----------------------------------
..............................................................................................................................................................................................................................CCCGGATCGGAGACTGAGG.....................................................................................1920.500.50-------------0.50--------------------------------------------------------------------------
..........................................................AGGACTGGCGAGAGAGGCGCGCCACGCT................................................................................................................................................................................................................................................2820.500.50-----0.50----------------------------------------------------------------------------------
.........................................GTGGCTGAAGTGTTCTGAG..........................................................................................................................................................................................................................................................................1920.500.50--0.50-------------------------------------------------------------------------------------
..........................................TGGCTGAAGTGTTCTGAGGACTGGCGA.................................................................................................................................................................................................................................................................2720.500.50---0.50------------------------------------------------------------------------------------
...................................CTCCCTGTGGCTGAAGTGTTCTGAGGA........................................................................................................................................................................................................................................................................2720.500.50--------------------------------------------------------------0.50-------------------------
...................................................................................................................................CCGTCAGGTCCGACTGTGGGCTGGCG.........................................................................................................................................................................2620.500.50------------------------------------------------------------------0.50---------------------
..........................................................AGGACTGGCGAGAGAGGCGCGCCA....................................................................................................................................................................................................................................................2420.500.50----------------------------------------------------------------------------------0.50-----
...GTGGCCAAGTCGATTGGCCGTG.............................................................................................................................................................................................................................................................................................................2220.500.50--------------------------------------------------------------------------------0.50-------
...........GTCGATTGGCCGTGGCAAG........................................................................................................................................................................................................................................................................................................1920.500.50---------------0.50------------------------------------------------------------------------
........................................................................................................................................................................................AAGCCAGGCCGTACAGCTCAGG........................................................................................................................2220.500.500.50---------------------------------------------------------------------------------------
......................................................................................................................................................................................CCAAGCCAGGCCGTAC................................................................................................................................1620.500.50-----------------------------------------------------------0.50----------------------------
...................................................................................................................................CCGTCAGGTCCGACTG...................................................................................................................................................................................1620.500.50--------------------------------------------------0.50-------------------------------------
..............................................................................................................................................................TGGGCGCTGGGCTTGCTGG.....................................................................................................................................................1920.500.50-------------------------------------------------------------0.50--------------------------
..............GATTGGCCGTGGCAAGTGAC....................................................................................................................................................................................................................................................................................................2020.500.50------------------------------------------------------------0.50---------------------------
.................................................AGTGTTCTGAGGACTGGCGAG................................................................................................................................................................................................................................................................2120.500.50----------------------------------------------------0.50-----------------------------------
......................................CCTGTGGCTGAAGTGTT...............................................................................................................................................................................................................................................................................1720.500.50-------------------------------------0.50--------------------------------------------------
.................................................................................................................................................................................................................................GGATCGGAGACTGAG......................................................................................1530.330.33---------------------------------------------------------------------------------------0.33
..................................................................................................................................................................................................................................................................................AGGAGTGGACACTGCAGG..................................1830.330.330.33---------------------------------------------------------------------------------------
....................................................................................................................................................................................TGCCAAGCCAGGCCG...................................................................................................................................1540.250.25------------------------0.25---------------------------------------------------------------

Antisense strand
ACAGTGGCCAAGTCGATTGGCCGTGGCAAGTGACCCTCCCTGTGGCTGAAGTGTTCTGAGGACTGGCGAGAGAGGCGCGCCATGCTTGCCCCCTGCTCAGGTTGGGAGCTTGGCTGCTTCCGTCTCTGTCTCCGTCAGGTCCGACTGTGGGCTGGCGCTGGGCGCTGGGCTTGCTGGGCTTGCCAAGCCAGGCCGTACAGCTCAGGTGGGAGCGAGCGCTGGCCCGGATCGGAGACTGAGGTCCCTCCGCCTGGCCCGGGGCGCCGAACTCTGAAGGAGTGGACACTGCAGGTGAGCCCGTTTGGTCGGCTGCGGGCGCGGCTCCC
.......................................................(((((((..(((((((((((((.((((.(((..((((((....)))..)))))).))))))))))..)))).)))))).))))(((((....)))))..............................................................................................................................................................................
..................................................51...................................................................................................152............................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577453(Rovira)
total RNA. (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR038854(GSM458537)
MM653. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM532886(GSM532886)
G850T. (cervix)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR029124(GSM416753)
HeLa. (hela)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191457(GSM715567)
27genomic small RNA (size selected RNA from t. (breast)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)		SRR038863(GSM458546)
MM603. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029131(GSM416760)
MCF7. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
.....................................................................GAGAGGCGCGCCATGCTA............................................................................................................................................................................................................................................... 182.000.00---------2.00------------------------------------------------------------------------------
........................................................................................................................................GCCAGCCCACAGTCGGACCT.......................................................................................................................................................................... 2021.501.501.50---------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................CTGCGGGCGCGGCTCATCG 191.000.00-----------------------------1.00----------------------------------------------------------
.........................................GTGGCTGAAGTGTTCTCAC.......................................................................................................................................................................................................................................................................... 191.000.00----------------------------------------1.00-----------------------------------------------
.................................................................................................................................................................................................................................................................................................................TCGGCTGCGGGCGCGGA.... 171.000.00------------------------------1.00---------------------------------------------------------
...............................................................................................................................................................................................................................................................................................CGACCAAACGGGCTCACCTGC.................. 2111.001.00--1.00-------------------------------------------------------------------------------------
.......................................................................................................................ACCTGACGGAGACAGAGACGG.......................................................................................................................................................................................... 2121.001.000.50--------------------------------------------0.50------------------------------------------
............................................................................................................................................................................................TCCCACCTGAGCTGTACGGCCTG................................................................................................................... 2311.001.00----------------------------------1.00-----------------------------------------------------
................................................................................................................................................................................................................................................CCGGGCCAGGCGGAGGGAC................................................................... 1921.001.00-1.00--------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TCCGATCCGGGCCAGCGC............................................................................................. 1821.001.00----0.50--0.50--------------------------------------------------------------------------------
..................................................................................................................................................................CGCTGGGCTTGCTGGGCG.................................................................................................................................................. 181.000.00---------------------------------------------------1.00------------------------------------
........................................................................................................................................................................................................................................................CGGCGCCCCGGGCCAGGC............................................................ 1811.001.00----------------------1.00-----------------------------------------------------------------
.....................CGTGGCAAGTGACCCTCA............................................................................................................................................................................................................................................................................................... 181.000.00-------------------------------------------1.00--------------------------------------------
..................................................................................................................................................................CGCTGGGCTTGCTGGGAG.................................................................................................................................................. 181.000.00----1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................CCTGGCCCGGGGCGCCGG........................................................... 181.000.00--------------1.00-------------------------------------------------------------------------
....................................................................................................................CTGACGGAGACAGAGACGGAAG............................................................................................................................................................................................ 2220.500.50-----------------------------------------------------------------------0.50----------------
..................................................................................................................................CCAGCCCACAGTCGGACCTGACGGA........................................................................................................................................................................... 2520.500.50-------------------------------------------------------------------------0.50--------------
..............................................................................................................................................................................................................................AGGGACCTCAGTCTCCGATCCGGG................................................................................ 2420.500.500.50---------------------------------------------------------------------------------------
.........................................................................................................................CAGTCGGACCTGACGGAGACAGAGAC................................................................................................................................................................................... 2620.500.50---0.50------------------------------------------------------------------------------------
....................................................................................................................CGGAGACAGAGACGGAAG................................................................................................................................................................................................ 1820.500.50--0.50-------------------------------------------------------------------------------------
..................................................................................................................................ACAGTCGGACCTGACGGA.................................................................................................................................................................................. 1820.500.50--------0.50-------------------------------------------------------------------------------
............................................................................................................................TCGGACCTGACGGAGACAGA...................................................................................................................................................................................... 2020.500.50-----------------------------------------------------------------------------------0.50----
.................CACTTGCCACGGCCA...................................................................................................................................................................................................................................................................................................... 1520.500.50-------------------------------0.50--------------------------------------------------------
...........TGCCACGGCCAATCGAC.......................................................................................................................................................................................................................................................................................................... 1720.500.50----------------------------------------------------------------------0.50-----------------
..................................................................................................................ACGGAGACAGAGACGGAAGCA............................................................................................................................................................................................... 2120.500.50--0.50-------------------------------------------------------------------------------------
................................................................................................................ACGGAGACAGAGACGGAAGCAGC............................................................................................................................................................................................... 2320.500.50---------------------------------------0.50------------------------------------------------
........................................................................................................................CGGACCTGACGGAGACAGAGACG....................................................................................................................................................................................... 2320.500.50------------0.50---------------------------------------------------------------------------
.............................................................................................................................................................................................................................CTCAGTCTCCGATCCGGGC...................................................................................... 1920.500.50-------0.50--------------------------------------------------------------------------------
........................................................................................................................CACAGTCGGACCTGACGGAGACAGAGACG................................................................................................................................................................................. 2920.500.50-------------------------------0.50--------------------------------------------------------