ID: uc011kko.1_intron_1_0_chr7_101944564_f.5p
GENE: (2)
chr7:101944514-101944763+


(1)
AGO2.ip
(1)
B-CELL
(4)
BRAIN
(8)
BREAST
(7)
CELL-LINE
(27)
CERVIX
(5)
HEART
(2)
HELA
(1)
KIDNEY
(10)
LIVER
(3)
OTHER
(14)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
GGGCTGTGGCCGAGGAACGCTTCCGCCTGGAGTTCTTCGTGCCGCCCAAAGTGAGTTACCCCATAATCCCACCTAGCCTGGGGGGACCAGAGGAGGCACCTGGGCAGCAGCTGAGGGTGCCAGGGACTGCCTTTGGGGACCGCGTGGTCTAATCTGGTTGACAGGGTGAAGTATTTGGTGCCAGGACCCTGGGAGGTGGGCCTGTCATGCCTCTTGAACAAGTCACCCCTTCAACCCCGGTTCTTCCTTT
........................................................................................................................................(((((....)))))...(((.((..((((((...((((...))))....))))))..)).)))...................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR040031(GSM532916)
G013T. (cervix)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR040037(GSM532922)
G243T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR040025(GSM532910)
G613T. (cervix)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR040040(GSM532925)
G612N. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM532890(GSM532890)
G576T. (cervix)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR040011(GSM532896)
G529T. (cervix)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR040036(GSM532921)
G243N. (cervix)
GSM532886(GSM532886)
G850T. (cervix)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR040039(GSM532924)
G531T. (cervix)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577745(Rovira)
total RNA. (breast)
SRR040010(GSM532895)
G529N. (cervix)
SRR040007(GSM532892)
G601T. (cervix)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR040028(GSM532913)
G026N. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR040008(GSM532893)
G727N. (cervix)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
TAX577579(Rovira)
total RNA. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR040015(GSM532900)
G623T. (cervix)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR040034(GSM532919)
G001N. (cervix)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR189784SRR040018(GSM532903)
G701N. (cervix)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029124(GSM416753)
HeLa. (hela)
SRR037936(GSM510474)
293cand1. (cell line)
GSM532877(GSM532877)
G691N. (cervix)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
TAX577588(Rovira)
total RNA. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040029(GSM532914)
G026T. (cervix)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR189783SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR191481(GSM715591)
43genomic small RNA (size selected RNA from t. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR040038(GSM532923)
G531N. (cervix)
GSM532873(GSM532873)
G699N. (cervix)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040043(GSM532928)
G428T. (cervix)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR040035(GSM532920)
G001T. (cervix)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR040027(GSM532912)
G220T. (cervix)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
GSM532872(GSM532872)
G652T. (cervix)
.........................................................................................................................................GACCGCGTGGTCTAATGGA..............................................................................................19221.000.0046.0026.0014.0013.0012.008.0011.007.004.004.00-3.003.003.002.002.005.003.004.002.003.00-2.002.003.002.00-1.001.001.002.002.001.00-1.001.002.002.00-1.001.00-1.00-1.00-1.001.001.001.00-------1.001.001.00---1.00-1.001.001.001.001.001.00-1.00--1.00---1.00-1.001.00-
.........................................................................................................................................GACCGCGTGGTCTAATGG...............................................................................................1839.000.0013.002.00-3.00-6.00-2.00---3.001.001.00------1.002.00---1.00-1.00-------1.00-----------------1.00----------1.00-------------------
.........................................................................................................................................GACCGCGTGGTCTAATGGAT.............................................................................................2011.000.00---------2.003.00----1.00----------2.00------1.00-----------------1.00--1.00-----------------------------
.........................................................................................................................................GACCGCGTGGTCTAATGGT..............................................................................................1910.000.00----3.00-1.00-1.00---1.00-1.00------1.00-------------------------------------------------------1.001.00-----
..........................................................................................................................................ACCGCGTGGTCTAATGGA..............................................................................................189.000.001.00-6.00--1.00--------------------------------------------------------------------1.00---------
.........................................................................................................................................GACCGCGTGGTCTAATGTA..............................................................................................198.000.002.003.001.001.00------------------------------------------------------------------------1.00-------
.........................................................................................................................................GACCGCGTGGTCTAATGGG..............................................................................................197.000.003.00-------1.00-----1.00--1.00--------------------------------------------------------------1.00---
.........................................................................................................................................GACCGCGTGGTCTAATGGC..............................................................................................197.000.00--1.00---1.00-------1.00--------------1.00---------------1.00-------------------------1.00-----------1.00
.........................................................................................................................................GACCGCGTGGTCTAA..................................................................................................1517.007.00----------3.00----1.00----------------1.00----------------------1.00----1.00-----------------------
.........................................................................................................................................GACCGCGTGGTCTAATG................................................................................................174.000.00-------------2.00-1.00---------------------------------------------------------1.00----------
.........................................................................................................................................GACCGCGTGGTCTAATGT...............................................................................................183.000.00-1.00-------------------1.00-----------1.00--------------------------------------------------
.........................................................................................................................................GACCGCGTGGTCTAATGCA..............................................................................................193.000.00-2.00-----------------1.00----------------------------------------------------------------
..........................................................................................................................................ACCGCGTGGTCTAATGGC..............................................................................................182.000.00--1.00--------------------1.00------------------------------------------------------------
.........................................................................................................................................GACCGCGTGGTCTAATGTC..............................................................................................192.000.00--------1.00--------1.00------------------------------------------------------------------
.........................................................................................................................................GACCGCGTGGTCTAATGCC..............................................................................................191.000.00----------------------1.00-------------------------------------------------------------
.......................CGCCTGGAGTTCTTCGTG.................................................................................................................................................................................................................1811.001.00---------1.00--------------------------------------------------------------------------
.........................................................................................................................................GACCGCGTGGTCTAATGTT..............................................................................................191.000.00--------------------------------------------------1.00---------------------------------
........................................................................................................................................................................................GACCCTGGGAGGTGGGC.................................................1711.001.00--------------------------------------------------------------1.00---------------------
.........................................................................................................................................GACCGCGTGGTCTAACGC...............................................................................................1811.007.001.00-----------------------------------------------------------------------------------
.................................................................................................................................................................CAGGGTGAAGTATTTACT.......................................................................181.000.00--------------------------------------------------------1.00---------------------------
.........................................................................TAGCCTGGGGGGACCATAG..............................................................................................................................................................191.000.00-------------------------------------------1.00----------------------------------------
.........................................................................................................................................GACCGCGTGGTCTAAGGAA..............................................................................................1911.007.00-------------------1.00----------------------------------------------------------------
........................................................................................................................CAGGGACTGCCTTTGTGC................................................................................................................181.000.00-----------------------------------------1.00------------------------------------------
.....................................................................................................................................................................GTGAAGTATTTGGTGCCAGGACCCTGGGA........................................................2911.001.00--------------------------------------1.00---------------------------------------------
.........................................................................................................................................GACCGCGTGGTCTAACGGC..............................................................................................1911.007.00--1.00---------------------------------------------------------------------------------
.........................................................................................................................................GACCGCGTGGTCTAATGA...............................................................................................181.000.001.00-----------------------------------------------------------------------------------
.........................................................................................................................................GACCGCGTGGTCTAATGAA..............................................................................................191.000.00----------------------------1.00-------------------------------------------------------
.........................................................................................................................................GACCGCGTGGTCTAATTGA..............................................................................................191.000.00------------1.00-----------------------------------------------------------------------
.....................TCCGCCTGGAGTTCTTCGTG.................................................................................................................................................................................................................2011.001.00----------------------------------1.00-------------------------------------------------
.........................................................................................................................................GACCGCGTGGTCTAATCGT..............................................................................................191.000.00----1.00-------------------------------------------------------------------------------
.........................................................................................................................................GACCGCGTGGTCTAATCAA..............................................................................................191.000.001.00-----------------------------------------------------------------------------------

Antisense strand
GGGCTGTGGCCGAGGAACGCTTCCGCCTGGAGTTCTTCGTGCCGCCCAAAGTGAGTTACCCCATAATCCCACCTAGCCTGGGGGGACCAGAGGAGGCACCTGGGCAGCAGCTGAGGGTGCCAGGGACTGCCTTTGGGGACCGCGTGGTCTAATCTGGTTGACAGGGTGAAGTATTTGGTGCCAGGACCCTGGGAGGTGGGCCTGTCATGCCTCTTGAACAAGTCACCCCTTCAACCCCGGTTCTTCCTTT
........................................................................................................................................(((((....)))))...(((.((..((((((...((((...))))....))))))..)).)))...................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR040031(GSM532916)
G013T. (cervix)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR040037(GSM532922)
G243T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR040025(GSM532910)
G613T. (cervix)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR040040(GSM532925)
G612N. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM532890(GSM532890)
G576T. (cervix)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR040011(GSM532896)
G529T. (cervix)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR040036(GSM532921)
G243N. (cervix)
GSM532886(GSM532886)
G850T. (cervix)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR040039(GSM532924)
G531T. (cervix)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577745(Rovira)
total RNA. (breast)
SRR040010(GSM532895)
G529N. (cervix)
SRR040007(GSM532892)
G601T. (cervix)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR040028(GSM532913)
G026N. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR040008(GSM532893)
G727N. (cervix)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
TAX577579(Rovira)
total RNA. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR040015(GSM532900)
G623T. (cervix)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR040034(GSM532919)
G001N. (cervix)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR189784SRR040018(GSM532903)
G701N. (cervix)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029124(GSM416753)
HeLa. (hela)
SRR037936(GSM510474)
293cand1. (cell line)
GSM532877(GSM532877)
G691N. (cervix)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
TAX577588(Rovira)
total RNA. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040029(GSM532914)
G026T. (cervix)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR189783SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR191481(GSM715591)
43genomic small RNA (size selected RNA from t. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR040038(GSM532923)
G531N. (cervix)
GSM532873(GSM532873)
G699N. (cervix)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040043(GSM532928)
G428T. (cervix)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR040035(GSM532920)
G001T. (cervix)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR040027(GSM532912)
G220T. (cervix)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
GSM532872(GSM532872)
G652T. (cervix)
.................................................................................................................................................................................................AGGTGGGCCTGTCATAAG....................................... 181.000.00----------------------------------------------------1.00-------------------------------
..................................................................................................................................................................AGGGTGAAGTATTTGGTTG..................................................................... 191.000.00-------------------------------------------------------------1.00----------------------