ID: uc011kgw.1_intron_16_0_chr7_80546136_r.3p
GENE: (1)
chr7:80546086-80546335-


(1)
B-CELL
(1)
BRAIN
(9)
CELL-LINE
(4)
HEART
(1)
HELA
(2)
LIVER
(9)
OTHER
(7)
SKIN
(1)
TESTES

Sense strand
GCAAAGACTTCCAGACACAAATGAATCAAATCCACATTTTCACATCTGAGAAGCAAAGACACAGCACCTCCTACTGTTTGCATTACTGTAAAAGTTCAGATGGTTCTTTTGTGAATAGGGTGTTTTGTCTAGATTGCTGTTTTTTCCTACTCCTAAAATGTGAAATGAGATATAACAAACATGTTGTCTCTCTCTTAAAGGTATTTTCCCTTGGATATTAACTTGCATATCTGAAGAAATGGCATTCCGG
...................................................((((((((((.((((((.....(((((..((..(((((..........))))).....))..))))))))))).)))))...)))))................................................................................................................
..................................................51..............................................................................................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189785SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189786SRR343334SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR189783SRR343335DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189782SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR038862(GSM458545)
MM472. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189787SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR343336SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
.....................................................................................................................GGGTGTTTTGTCTAG......................................................................................................................15391.3391.3360.007.334.675.671.333.33--2.670.33--1.671.33-----------0.670.670.67-0.330.33-0.33--
.............................................................................................................................TGTCTAGATTGCTGTTTTTTCCTACTCCTAAAATGTGAAATGAGATATAACAAACATGTTGTCTCTCTCTTAAAG..................................................7513.003.00-------3.00---------------------------
............................................................................................................................................TTTTTCCTACTCCTACAAG...........................................................................................193.000.00----2.00----1.00-------------------------
.....................................................CAAAGACACAGCACCTTATG.................................................................................................................................................................................203.000.00----2.00----1.00-------------------------
.....................................................................................................................................................................................................................................TCTGAAGAAATGGCATTCCG.2011.001.00-----------------1.00-----------------
.....................................................................................................................................................................................................................................TCTGAAGAAATGGCATTCCGGT221.000.00------------------1.00----------------
..................................................................................................................................................................................................................................ATATCTGAAGAAATGTGCA.....191.000.00--1.00--------------------------------
.................................................................................................................................................................................................................................CATATCTGAAGAAATGGCATTGC..231.000.00-----------1.00-----------------------
.......................................................................................................................................................................................................................................TGAAGAAATGGCATTCCGGACC221.000.00----------------------1.00------------
............................................TCTGAGAAGCAAAGACCAAA..........................................................................................................................................................................................201.000.00--------------------1.00--------------
.................................................................................................................................................................................................................................CATATCTGAAGAAATGGCATTCC..2311.001.00-----------1.00-----------------------
.................................................................................................................................................................................................................................CATATCTGAAGAAATGG........1720.500.50----------------------------0.50------
.....................................................................................................................GGGTGTTTTGTCTAGTGG...................................................................................................................1830.3391.33-------------------------------0.33---
.................................................................................................................................................................................................................................CATATCTGAAGAAATG.........1670.290.29---------------------------------0.29-
.....................................................................................................................................................................................................................................TCTGAAGAAATGGCAT.....1670.140.14----------------------------------0.14

Antisense strand
GCAAAGACTTCCAGACACAAATGAATCAAATCCACATTTTCACATCTGAGAAGCAAAGACACAGCACCTCCTACTGTTTGCATTACTGTAAAAGTTCAGATGGTTCTTTTGTGAATAGGGTGTTTTGTCTAGATTGCTGTTTTTTCCTACTCCTAAAATGTGAAATGAGATATAACAAACATGTTGTCTCTCTCTTAAAGGTATTTTCCCTTGGATATTAACTTGCATATCTGAAGAAATGGCATTCCGG
...................................................((((((((((.((((((.....(((((..((..(((((..........))))).....))..))))))))))).)))))...)))))................................................................................................................
..................................................51..............................................................................................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189785SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189786SRR343334SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR189783SRR343335DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189782SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR038862(GSM458545)
MM472. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189787SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR343336SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
............................................................................................AGTTCAGATGGTTCTTTCTG.......................................................................................................................................... 205.000.00------3.00---------1.00----1.00-------------
............................................................................................AGTTCAGATGGTTCTTTTCTG......................................................................................................................................... 212.000.00-------------------1.00----1.00----------
...........................................................................................................................................TTTTTTCCTACTCCTAAAAAA.......................................................................................... 212.000.00----------2.00------------------------
...........................................................................................................................................TTTTTTCCTACTCCTAAA............................................................................................. 181.000.00---------------1.00-------------------
..................................................................................................................................................................................ACATGTTGTCTCTCTCTCTGT................................................... 211.000.00-----------------------1.00-----------
........................ATCAAATCCACATTTTCCTG.............................................................................................................................................................................................................. 201.000.00--------------1.00--------------------