ID: uc011kgk.1_intron_8_0_chr7_76133763_f.3p
GENE: DTX2(9)
chr7:76134491-76134740+


(10)
B-CELL 		(6)
BRAIN 		(2)
BREAST 		(11)
CELL-LINE 		(5)
CERVIX 		(5)
HEART 		(3)
LIVER 		(1)
OTHER 		(17)
SKIN 		(1)
XRN.ip

Sense strand
CCCAGGTTCATGTGGGATCCTAATGTACTATCCAGTGGGCAGTTTTGGGGTCCCTGCAGATGGGGTGAGTGCCAGGGAGTGGATGAGTCACCTGGGAGGGGCTGGGATGGGAAGAACATGGTGCCAACCCGTGCCTGCTCACTGAGCCCCTCTCACTCTCCGTCCCCTCCTTCCTCTTCCCCCTCCTCCTCCCCGGGCAGGTCCTAGAGCTCCTGAAGGTGGCCTGGAAGAGGCGGCTCATCTTCACAGT
..........................................................................................((.((((((((..((((.((((((.....(((((......))))).((((...))))......................))))))..))))....)))))))).))......................................................
......................................................................................87...............................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189786SRR343334SRR189787SRR189785SRR343335SRR189782SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189783SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR038857(GSM458540)
D20. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR040018(GSM532903)
G701N. (cervix)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040007(GSM532892)
G601T. (cervix)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR040010(GSM532895)
G529N. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040037(GSM532922)
G243T. (cervix)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................................................................................................................................TCCTCTTCCCCCTCCTCCCAG..........................................................21116.000.0078.003.0012.001.0012.008.002.00-------------------------------------------------------------
...........................................................................................................................................................................TCCTCTTCCCCCTCCTCCCAGT.........................................................2256.000.0021.0023.001.0010.00-1.00--------------------------------------------------------------
...........................................................................................................................................................................TCCTCTTCCCCCTCCTCCCAGA.........................................................224.000.00--1.002.00------------1.00---------------------------------------------------
...........................................................................................................................................................................TCCTCTTCCCCCTCCTCCCAGC.........................................................222.000.00-1.00-1.00----------------------------------------------------------------
...........................................................................................CTGGGAGGGGCTGGGATGGGAA.........................................................................................................................................2212.002.00--------1.00-----------------------1.00-----------------------------------
....................................................................................................................................................................................CCCTCCTCCTCCCCGGAGGG..................................................202.000.00-----------------1.00-----------1.00--------------------------------------
..................................................................................................................................................................................CCCCCTCCTCCTCCCCGGAGGG..................................................222.000.00-------1.00--------------------1.00---------------------------------------
........................................................................................................................................................TCACTCTCCGTCCCCTCCCG..............................................................................202.000.00------1.00----------------1.00--------------------------------------------
...........................................................................................................................................................................TCCTCTTCCCCCTCCTCCCAT..........................................................212.000.00--1.00-1.00---------------------------------------------------------------
...........................................................................................................................................................................TCCTCTTCCCCCTCCTCCCA...........................................................202.000.001.00-------------------1.00-----------------------------------------------
...........................................................................................................................................................................TCCTCTTCCCCCTCCTCCTAGT.........................................................221.000.001.00-------------------------------------------------------------------
.................................................................................................................................................................................................................CTCCTGAAGGTGGCCTGGAAGAGGCGGCC............291.000.00------------------1.00-------------------------------------------------
...........................................................................................CTGGGAGGGGCTGGGATGGGAAA........................................................................................................................................2311.002.00------------------------------------1.00-------------------------------
...................................................................................................................................................CCCTCTCACTCTCCGTCCCCTCCTTCT............................................................................271.000.00--------------1.00-----------------------------------------------------
.....................................................................................................................................................................................CCTCCTCCTCCCCGGAGAG..................................................1901.001.00------------------------1.00-------------------------------------------
...................................................................................................................................................................................CCCCTCCTCCTCCCCGGAG....................................................191.000.00-------1.00------------------------------------------------------------
......................................................................................................TGGGATGGGAAGAACATGGTGCCA............................................................................................................................2411.001.00-------------------1.00------------------------------------------------
....................................................................................................................................................................................CCCTCCTCCTCCCCGGAG....................................................181.000.00----------------------1.00---------------------------------------------
...........................................................................................CTGGGAGGGGCTGGGATTGGC..........................................................................................................................................211.000.00---------------------------1.00----------------------------------------
...................................................................................................................................................................................CCCCTCCTCCTCCCCGGCGCC..................................................211.000.00--------1.00-----------------------------------------------------------
.....................................................................................................................................................................................CCTCCTCCTCCCCGG......................................................1501.001.00-------------------------1.00------------------------------------------
........................................................................................................................................................TCACTCTCCGTCCCCCCCC...............................................................................191.000.00------1.00-------------------------------------------------------------
............................................................................................TGGGAGGGGCTGGGATGGGAA.........................................................................................................................................2111.001.00---------------------------------1.00----------------------------------
...................................................................................................................................................................................CCCCTCCTCCTCCCCGGCCGT..................................................211.000.00----------1.00---------------------------------------------------------
...........................................................................................................................................................................TCCTCTTCCCCCTCCTCGTA...........................................................201.000.00-1.00------------------------------------------------------------------
....................................................................GTGCCAGGGAGTGGAGCT....................................................................................................................................................................181.000.00--------------------------1.00-----------------------------------------
.............................................................................................................................................................CTCCGTCCCCTCCTTCCTCT.........................................................................2011.001.00-------------1.00------------------------------------------------------
..........................................................................................................................................................................TTCCTCTTCCCCCTCCTCCTCG..........................................................221.000.00----1.00---------------------------------------------------------------
.....................................................................................................................................................................................................................TGAAGGTGGCCTGGAAGAG..................1911.001.00----------------------------------1.00---------------------------------
....................................................................................................................................................................................CCCTCCTCCTCCCCGGAGG...................................................191.000.00---------------------1.00----------------------------------------------
......................................................................................................................................................................................................................GAAGGTGGCCTGGAAGAG..................1820.500.50-----------------------------------------------0.50--------------------
............................................................................................TGGGAGGGGCTGGGATGGG...........................................................................................................................................1930.330.33----------------------------------------------------0.33---------------

Antisense strand
CCCAGGTTCATGTGGGATCCTAATGTACTATCCAGTGGGCAGTTTTGGGGTCCCTGCAGATGGGGTGAGTGCCAGGGAGTGGATGAGTCACCTGGGAGGGGCTGGGATGGGAAGAACATGGTGCCAACCCGTGCCTGCTCACTGAGCCCCTCTCACTCTCCGTCCCCTCCTTCCTCTTCCCCCTCCTCCTCCCCGGGCAGGTCCTAGAGCTCCTGAAGGTGGCCTGGAAGAGGCGGCTCATCTTCACAGT
..........................................................................................((.((((((((..((((.((((((.....(((((......))))).((((...))))......................))))))..))))....)))))))).))......................................................
......................................................................................87...............................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189786SRR343334SRR189787SRR189785SRR343335SRR189782SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189783SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR038857(GSM458540)
D20. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR040018(GSM532903)
G701N. (cervix)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040007(GSM532892)
G601T. (cervix)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR040010(GSM532895)
G529N. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040037(GSM532922)
G243T. (cervix)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................................................................................................................................GAAGAGGAAGGAGGGGACG....................................................................... 1924.004.00---------2.00----------------------------0.50-0.50-0.50--0.50----------------------
................................................................................................................................................................CGTCCCCTCCTTCCTCTACG...................................................................... 202.330.00-------------0.33-----------------------------0.67-------0.33---0.33--0.330.33--------
................................................................................................................................................................CGTCCCCTCCTTCCTCTAC....................................................................... 192.330.00-------------------------------------1.00--0.33-0.33-------------0.33---0.33-------
................................................................................................................................................................AGAGGAAGGAGGGGACG......................................................................... 1732.002.00----------1.00-0.33----------------------------------------0.33---0.33----------
................................................................................................................................................................CGTCCCCTCCTTCCTCACG....................................................................... 192.000.00--------------0.290.140.14----------------------0.86-----------0.14----------0.140.29----
................................................................................................................................................................GGAAGAGGAAGGAGGGGACG...................................................................... 2021.501.50--------------------------------------0.50--0.50--0.50-----------------------
...............................................................................................GAGGGGCTGGGATGGGGCCG....................................................................................................................................... 201.000.001.00-------------------------------------------------------------------
................................................................................................................................................................AAGAGGAAGGAGGGGACG........................................................................ 1821.001.00-----------0.50-------------------------------------0.50------------------
.................................................................................................................................................................GTCCCCTCCTTCCTCTTCTTC.................................................................... 211.000.00------------------------------1.00-------------------------------------
...................................................................................................................................................................CCCCTCCTTCCTCTTCCTG.................................................................... 191.000.00-------------------------------1.00------------------------------------
.........................................................................................................................................................CACTCTCCGTCCCCTGAA............................................................................... 181.000.00-----------------------------------1.00--------------------------------
............................................................................................................................................ACTGAGCCCCTCTCACTCTG.......................................................................................... 201.000.00------1.00-------------------------------------------------------------
.................................................................................................................................................................GTCCCCTCCTTCCTCTATAG..................................................................... 201.000.00---------------1.00----------------------------------------------------
................................................................................................................................................................................TTCCCCCTCCTCCTCCAAAA...................................................... 201.000.00-----------1.00--------------------------------------------------------
...................................................................................................................................................................CCCCTCCTTCCTCTTCCTCG................................................................... 201.000.00------------1.00-------------------------------------------------------
................................................................................................................................................................CGTCCCCTCCTTCCTCTACGT..................................................................... 210.670.00--------------------------------------------------0.33---0.33-------------
......................................................................................................................................................................................CTGCCCGGGGAGGAGGAG.................................................. 1820.500.50------------------------------------------------0.50-------------------
................................................................................................................................................................CGTCCCCTCCTTCCTCTTAC...................................................................... 200.500.00----------------------------------------------0.50---------------------
................................................................................................................................................................CGTCCCCTCCTTCCTCTA........................................................................ 180.330.00-------------------------------------------------------------0.33------
................................................................................................................................................................CGTCCCCTCCTTCCTCTAA....................................................................... 190.330.00-----------------------------------------0.33--------------------------
................................................................................................................................................................CGTCCCCTCCTTCCTCAC........................................................................ 180.290.00--------------------------------------------------0.14----------------0.14
..................................................................................................................................................................GGAAGAGGAAGGAGGGGA...................................................................... 1840.250.25----------------------------------------------------------------0.25---
.......................................................................................................................................................................................CCTGCCCGGGGAGGAGGA................................................. 1850.200.20-----------------------------------------------------------------0.20--
................................................................................................................................................................CGTCCCCTCCTTCCTCTCGT...................................................................... 200.140.00------------------------------------------------------------------0.14-
................................................................................................................................................................GAGGAAGGAGGGGACG.......................................................................... 1670.140.14------------0.14-------------------------------------------------------
................................................................................................................................................................CGTCCCCTCCTTCCTCA......................................................................... 170.140.00--------------------------------------------------------------0.14-----