| (3) B-CELL | (2) BRAIN | (2) BREAST | (8) CELL-LINE | (3) CERVIX | (2) HEART | (4) LIVER | (3) OTHER | (5) SKIN |
| AAAGAAGGTTTAAATTTATGATTGATGAATTTTTCTAACTGAAGGCTAAAAAAAGGCTGATTGATATAAAGTAGGTAGAATGTAAGAGTTCTTTCTGTGAATGTCTTCATTATTTTTTTTGGAAATGGAAAACTAAATTTGTAATAACATATTTTAGGATTAAGCAAAAAACTAATTAATCTGAGTTTTTTGCTTTATAGTTGAAAATTGAGAAAACCATGAAAGAAAAAGAAGAACTGTTAAAGTTAAT ..........................................................(((((((.............((((.((((((((.......)))).))))))))...(((((((.......((..(((((..(((....)))...)))))..))...)))))))...)))))))..................................................................... ..........................................................59..............................................................................................................................187............................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR189782 | SRR037937(GSM510475) 293cand2. (cell line) | SRR189783 | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029132(GSM416761) MB-MDA231. (cell line) | SRR189784 | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) | SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM532874(GSM532874) G699T. (cervix) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | TAX577579(Rovira) total RNA. (breast) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR040035(GSM532920) G001T. (cervix) | SRR191622(GSM715732) 175genomic small RNA (size selected RNA from . (breast) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | GSM532876(GSM532876) G547T. (cervix) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................TAAGCAAAAAACTAATTAATCTG................................................................... | 23 | 1 | 24.00 | 24.00 | 13.00 | 7.00 | 3.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................TTAAGCAAAAAACTAATTAATCTG................................................................... | 24 | 1 | 11.00 | 11.00 | 11.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................TTAAGCAAAAAACTAATTAATCT.................................................................... | 23 | 1 | 9.00 | 9.00 | 7.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................TTAAGCAAAAAACTAATTAATCTGT.................................................................. | 25 | 1 | 3.00 | 11.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................ATTAAGCAAAAAACTAATTAATCT.................................................................... | 24 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................AAAGAAAAAGAAGAACTGTT......... | 20 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................AGAAAAAGAAGAACTGTTAAAG..... | 22 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................GATTAAGCAAAAAACTAATTA........................................................................ | 21 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................ATATAAAGTAGGTAGAATGTA...................................................................................................................................................................... | 21 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................ATGATTGATGAATTTTTCTAACTGAAG.............................................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................AAACCATGAAAGAAAAAGAAGAACTG........... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................ATGAAAGAAAAAGAAGAACTGTTAAAGT.... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................ATGAATTTTTCTAACAGCT............................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................ACCATGAAAGAAAAAGAAGAA.............. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................TTAAGCAAAAAACTAATTAATCCG................................................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................TTAAGCAAAAAACTAATTAAT...................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................................................................................................TAAGCAAAAAACTAATTAATTTG................................................................... | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................TTCATTATTTTTTTTGCTG.............................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................TGAAAGAAAAAGAAGA............... | 16 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................ATTGAGAAAACCATGAAAGA........................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................CATTATTTTTTTTGGTACG............................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .............................................................................................................................................................GATTAAGCAAAAAACTAATTAAT...................................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TCTTCATTATTTTTTTTTTTG.............................................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................TAAGCAAAAAACTAATTAATCT.................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................GATTAAGCAAAAAACTAATGA........................................................................ | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................................AGTTGAAAATTGAGAAAAC................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................ATGAAAGAAAAAGAAGAGTT............ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ..............................................................................................................................................................................................................................AAGAAAAAGAAGAACTGTTA........ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TTTTTGGAAATGGAATAGG.................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................................CATGAAAGAAAAAGAAGAACTGTT......... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................................................................................TGAGAAAACCATGAAAGAAAAAGAAGAACT............ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TCTTCATTATTTTTTTTAT................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................ATGAAAGAAAAAGAAGAACTGTTAAAG..... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................AAAACCATGAAAGAACTT.................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................GAGAAAACCATGAAAGAAAA..................... | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ............................................................................................................................................................................................................................GAAAGAAAAAGAAGAACT............ | 18 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - |
| .......................................................................................................................................................................................................................ACCATGAAAGAAAAAGAA................. | 18 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| .........................................................................................................................................................................................................TGAAAATTGAGAAAACC................................ | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................AACCATGAAAGAAAAAGA.................. | 18 | 3 | 0.33 | 0.33 | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AAAGAAGGTTTAAATTTATGATTGATGAATTTTTCTAACTGAAGGCTAAAAAAAGGCTGATTGATATAAAGTAGGTAGAATGTAAGAGTTCTTTCTGTGAATGTCTTCATTATTTTTTTTGGAAATGGAAAACTAAATTTGTAATAACATATTTTAGGATTAAGCAAAAAACTAATTAATCTGAGTTTTTTGCTTTATAGTTGAAAATTGAGAAAACCATGAAAGAAAAAGAAGAACTGTTAAAGTTAAT ..........................................................(((((((.............((((.((((((((.......)))).))))))))...(((((((.......((..(((((..(((....)))...)))))..))...)))))))...)))))))..................................................................... ..........................................................59..............................................................................................................................187............................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR189782 | SRR037937(GSM510475) 293cand2. (cell line) | SRR189783 | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029132(GSM416761) MB-MDA231. (cell line) | SRR189784 | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) | SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM532874(GSM532874) G699T. (cervix) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | TAX577579(Rovira) total RNA. (breast) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR040035(GSM532920) G001T. (cervix) | SRR191622(GSM715732) 175genomic small RNA (size selected RNA from . (breast) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | GSM532876(GSM532876) G547T. (cervix) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................................................................AAAAGAAGAACTGTTAACTCC... | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................................AAAGAAGAACTGTTAAAGGCG.. | 21 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |