ID: uc011jzi.1_intron_11_0_chr7_26894510_r.5p
GENE: (1)
chr7:26896870-26897119-


(12)
CELL-LINE 		(1)
CERVIX 		(2)
OTHER 		(8)
SKIN

Sense strand
GTCTCCTGTGCCTGGAAGAGGCTGGTTTCATTCGATTCTAAAAGAAACGGGTAAAGTGTAGATTTTAAGAAATAACCTAGATTTCAAAAGCTTAAAAACCAACCAAGTTTGGTTGTGGACAGTCAACAAACTAAAATTATTTCGGGAACTGCTTCCAGTTTAAAGTTTTTTTTTTTTTTTTTTTTTTTTTAAGCAAAGCAGTTTCTACTCTCTCCACATCACCTTTGAGAAATAATCACGAAAAAGTCAC
...................................................................................................((((((....))))))............(((..((((..((((...((((((....)))))).))))..))))..))).........................................................................
..................................................................................................99........................................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)		SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTTACCC........................................................316.000.005.001.00---------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTCGG.............................................................266.000.006.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTCGAG.............................................................263.000.003.00----------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTTAAAC...........................................................293.000.003.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTCGC..........................................................293.000.002.001.00---------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTTTTTAGC.........................................................313.000.003.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTTATG.........................................................302.000.001.00--1.00-------------------
.........................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTAAGCACTTG...................................................302.000.00--2.00--------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTCTAC............................................................272.000.001.00--1.00-------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTTTCG............................................................282.000.001.001.00---------------------
......................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTTTTAAGCGC......................................................302.000.001.001.00---------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTTTTTCC..........................................................302.000.002.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTCGGG...........................................................282.000.002.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTCAGC............................................................272.000.002.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTCTGG.........................................................302.000.002.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTCTTC.............................................................262.000.002.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTCAGG.............................................................262.000.001.001.00---------------------
........................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTTAAGCACTTG...................................................312.000.001.00-1.00--------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTTTTCAG..........................................................301.000.001.00----------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTTTAAGCGTTT....................................................271.000.00--1.00--------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTTAAACC.......................................................321.000.001.00----------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTTTAAGCAAACCC..................................................291.000.00-1.00---------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTCTTC...........................................................281.000.001.00----------------------
.................................................................................................................................................................AAAGTTTTTTTTTTTTTTTTTTTTTTCG.............................................................281.000.00-1.00---------------------
................................................................................................................................................................TAAAGTTTTTTTTTTTTTTTTTCAT.................................................................251.000.00---1.00-------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTTACGG........................................................311.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTCATG...........................................................281.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTTACTC........................................................311.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTCGGG............................................................271.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTACCC.........................................................301.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTTATGTG.......................................................321.000.001.00----------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTCCG.............................................................271.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTTAAACAC......................................................331.000.001.00----------------------
.....................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTTTTTAAGCGTTT....................................................331.000.00--1.00--------------------
.........................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTAAGCGGG.....................................................281.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTCAC..........................................................291.000.001.00----------------------
.................................................................................................................................................................AAAGTTTTTTTTTTTTTTTTTCTC.................................................................241.000.001.00----------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTTAACT...........................................................291.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTAGGG.........................................................301.000.001.00----------------------
.................................................................................................................................................................AAAGTTTTTTTTTTTTTTTTTTTTCAGC.............................................................281.000.001.00----------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTTTTTCGG.........................................................311.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTCAAC...........................................................281.000.001.00----------------------
................................................................................................................................................................TAAAGTTTTTTTTTTTTTTTTTTTTATAA.............................................................291.000.00--1.00--------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTCGAC.............................................................261.000.00-1.00---------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTATTT.........................................................301.000.00-1.00---------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTTCAAA...........................................................291.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTTAACCAG......................................................331.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTCACC.........................................................301.000.001.00----------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTCTAC.............................................................271.000.001.00----------------------
.......................................................................................................CAAGTTTGGTTGTGGACAGTCAA............................................................................................................................2311.001.00-----------1.00-----------
.................................................................................................................................................................AAAGTTTTTTTTTTTTTTTTTTTTTTTTTAAGAC.......................................................341.000.00--1.00--------------------
................................CGATTCTAAAAGAAACGGGTAA....................................................................................................................................................................................................2211.001.00------------------1.00----
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTTCGG............................................................281.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTCCCG.............................................................261.000.00-1.00---------------------
........................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTTAAGCGGGG....................................................301.000.00-1.00---------------------
....................................................................................................................................................................GTTTTTTTTTTTTTTTTTTTTTTTTTAACTGA......................................................321.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTTAAAAG.......................................................321.000.001.00----------------------
.........................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTAAGCGGTG....................................................291.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTCCGC............................................................271.000.001.00----------------------
.................................................................................................................................................................AAAGTTTTTTTTTTTTTTTTTTTTTTTGCA...........................................................301.000.001.00----------------------
..........................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTAAGCGGG.....................................................271.000.001.00----------------------
.......................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTTTAAGCATTG....................................................311.000.00--1.00--------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTCGGA............................................................281.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTCGGC............................................................271.000.001.00----------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTTTTTACAAG.......................................................331.000.00--1.00--------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTTTTAGC..........................................................301.000.001.00----------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTTTTCCAC.........................................................311.000.001.00----------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTTCGC............................................................281.000.00-1.00---------------------
....................................................................................................................................................................GTTTTTTTTTTTTTTTTTTTTTTTTTAACCT.......................................................311.000.00---------------------1.00-
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTCGCC............................................................271.000.00-------------------1.00---
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTCTAT............................................................271.000.001.00----------------------
...............................................................................................................................................................................TTTTTTTTTTTTTTTAAGCAAACTTA.................................................261.000.00---1.00-------------------
........................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTTAAGCGTT.....................................................291.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTCATC.........................................................301.000.001.00----------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTCTTC.............................................................271.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTCGGA.........................................................301.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTCCCG...........................................................281.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTTACACG.......................................................321.000.00-1.00---------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTCAAA.........................................................301.000.00--1.00--------------------
.......................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTTTAAGCACAAG...................................................321.000.00-----1.00-----------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTCTAG............................................................281.000.001.00----------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTTTAAGCGGG.....................................................261.000.00-1.00---------------------
.......................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTTTAAGCAAAT....................................................311.000.001.00----------------------
.....................................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTTTTTAAGCGCG.....................................................321.000.00---1.00-------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTCGC.............................................................261.000.001.00----------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTTCTAC...........................................................291.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTTATCA........................................................311.000.00--------1.00--------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTCCGG............................................................271.000.001.00----------------------
................................................................................................................................................................TAAAGTTTTTTTTTTTTTTTACT...................................................................231.000.00--1.00--------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTCTCT.............................................................271.000.00-1.00---------------------
.................................................................................................................................................................AAAGTTTTTTTTTTTTTTTTTTTTTCAAA............................................................291.000.00--1.00--------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTAAGC.........................................................301.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTTTTAAGC........................................................3121.001.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTCGGC...........................................................281.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTCGAG............................................................271.000.001.00----------------------
.................................................................................................................................................................AAAGTTTTTTTTTTTTTTTTTTTTTTTTGGC..........................................................311.000.001.00----------------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTTTCTCG...........................................................281.000.00-----1.00-----------------
...................................................................................................................................................................AGTTTTTTTTTTTTTTTTTTTTCGGC.............................................................261.000.001.00----------------------
...............................................................................................................................................................TTAAAGTTTTTTTTTTTTTTTTTTTTAGG..............................................................291.000.00--1.00--------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTCCG..............................................................261.000.001.00----------------------
..................................................................................................................................................................AAGTTTTTTTTTTTTTTTTTTTTTTTTTAAG.........................................................3150.200.20---0.20-------------------

Antisense strand
GTCTCCTGTGCCTGGAAGAGGCTGGTTTCATTCGATTCTAAAAGAAACGGGTAAAGTGTAGATTTTAAGAAATAACCTAGATTTCAAAAGCTTAAAAACCAACCAAGTTTGGTTGTGGACAGTCAACAAACTAAAATTATTTCGGGAACTGCTTCCAGTTTAAAGTTTTTTTTTTTTTTTTTTTTTTTTTAAGCAAAGCAGTTTCTACTCTCTCCACATCACCTTTGAGAAATAATCACGAAAAAGTCAC
...................................................................................................((((((....))))))............(((..((((..((((...((((((....)))))).))))..))))..))).........................................................................
..................................................................................................99........................................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)		SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
................................................................................................................................................................TAAAGTTTTTTTTTTTTTTTTTTTTTTTGGCC.......................................................... 324.000.00----------1.00-1.00-------1.00-1.00
..................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAACTT............................................................ 2801.001.00-------------1.00---------
...............................................................................................................................................................TTAAAGTTTTTTTTTTTTTTTTTTTTTTGCAC........................................................... 321.000.00---------1.00-------------
...............................................................................................................................................................TTAAAGTTTTTTTTTTTTTTTTTTTTTTTCCC........................................................... 321.000.00-------1.00---------------
............................................................................................................................................................................................TTAAGCAAAGCAGTTTAA............................................ 181.000.00----1.00------------------
.............................................................................................................................................................................TTTTTTTTTTTTTTTTTAAGCTAG..................................................... 241.000.00----1.00------------------
................................................................................................................................................................TAAAGTTTTTTTTTTTTTTTTTTTTTTTCACC.......................................................... 321.000.00----------------1.00------
.........................................................................................................................................................................................................ATGTGGAGAGAGTAGAAA............................... 1811.001.00--------------1.00--------
............................................................................................................................................................................................................................ACCTTTGAGAAATAACTTG........... 191.000.00------1.00----------------
....................................................................................................................................................................................................AGCAGTTTCTACTCTAA..................................... 171.000.00-----------------1.00-----
........................................................................................................GACTGTCCACAACCAAACTT.............................................................................................................................. 2011.001.00---------------1.00-------