ID: uc011egp.1_intron_1_0_chr6_167413602_f.3p
GENE: FGFR1OP(2)
chr6:167416481-167416730+


(1)
BRAIN
(8)
CELL-LINE
(1)
HEART
(1)
HELA
(3)
OTHER
(3)
SKIN

Sense strand
AAATACAAATCTTCATATATGGTTTTGTTATATTAACTTTGAGAAATTACTAAATAGCACAAAGTAAGTCCTGTAGTAATTAACAGTTGTAGAATGGATTTTGTAAAACCATAATTTTATCAATGAAAACGTTAAACTTTATATTTTGTAGTTGTTTTTAGGGTAAACACATGACACTTAAATTTTTTTTTTTTTAACAGAACAAAACTCCTTTAGTTAATGAGAGCCTGAAAAAGTTTTTAAATACCAA
..................................................................................................................................................(((...(((((.......)))))....)))..........................................................................
.......................................................................................................................................136.............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189785SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
.............................................................................................................................................................................ACACTTAAATTTTTTTTTTTTTTTTG...................................................2611.000.005.003.001.001.00----1.00--------
.............................................................................................................................................................................ACACTTAAATTTTTTTTTTTTTTTG....................................................256.000.002.003.00-1.00-------------
..............................................................................................................................................................................CACTTAAATTTTTTTTTTTTTTTG....................................................244.000.001.00-2.001.00-------------
.............................................................................................................................................................................ACACTTAAATTTTTTTTTTTTTG......................................................234.000.001.001.001.001.00-------------
.............................................................................................................................................................................ACACTTAAATTTTTTTTTTTTTTG.....................................................243.000.002.00--1.00-------------
.............................................................................................................................................................................ACACTTAAATTTTTTTTTTTG........................................................213.000.001.001.001.00--------------
...........................................................................................................................................................................................................................ATGAGAGCCTGAAAAAGTTTTT.........2212.002.00-----2.00-----------
..............................................................................................................................................................................CACTTAAATTTTTTTTTTAAG.......................................................211.000.00-1.00---------------
.......................................................................................................................................................................................................................GTTAATGAGAGCCTGAAAAAGTTTTTAAATA....3111.001.00-------------1.00---
.................................................................................AACAGTTGTAGAATGGATTTTGTAAA...............................................................................................................................................2611.001.00-------1.00---------
............................................................................................................................................ATATTTTGTAGTTGTTTTTAGGG.......................................................................................2311.001.00----1.00------------
..............................................................................................................................................................................CACTTAAATTTTTTTTTTTAT.......................................................211.000.001.00----------------
.....................................................................................................................................................................................ATTTTTTTTTTTTTAACGCAC................................................211.000.00--------1.00--------
.............................................................................................................................................................................ACACTTAAATTTTTTTTTTTTTTTA....................................................251.000.001.00----------------
....................................................................................................................................................................................................................TTAGTTAATGAGAGCCTGAAAAAGT.............2511.001.00---------1.00-------
......................................................................................................................................AACTTTATATTTTGTATGA.................................................................................................191.000.00--------------1.00--
.........................................................................................................................................TTTATATTTTGTAGTTGTTTTTAGGGC......................................................................................271.000.00----1.00------------
.............................................................................................................................................................................ACACTTAAATTTTTTTTTTTTTTTTA...................................................261.000.00-1.00---------------
.............................................................................................................................................................................................................................GAGAGCCTGAAAAAGTTTT..........1911.001.00-------1.00---------
............................................................................................................................................ATATTTTGTAGTTGTTTTTAGGGC......................................................................................2411.001.00-----1.00-----------
......................................................................................TTGTAGAATGGATTTTTG..................................................................................................................................................181.000.00----------------1.00
...................................................................................................................................................................................AAATTTTTTTTTTTTTAACG...................................................201.000.00-1.00---------------
.............................................................................................................................................................................ACACTTAAATTTTTTTTTTTTG.......................................................221.000.00-1.00---------------
................................................................................................................................................................................CTTAAATTTTTTTTTTTTTACTAG..................................................241.000.001.00----------------
.......................................................................................................................................ACTTTATATTTTGTAGGG.................................................................................................181.000.00----1.00------------
...................................................................................................................................................................................AAATTTTTTTTTTTTTAA.....................................................1801.001.00------------1.00----
..................................................................................................................................................................................................TAACAGAACAAAACTCTTG.....................................191.000.00------1.00----------
..............................................................................................................................................................................CACTTAAATTTTTTTTTTTTTCTG....................................................241.000.00---1.00-------------
..........................................................................................................................................................................................................................AATGAGAGCCTGAAAAAG..............1811.001.00---------------1.00-
..................................................................................................................................................................................TAAATTTTTTTTTTTTTAAGGGG.................................................231.000.001.00----------------
..............................................................................................................................................................................CACTTAAATTTTTTTTTTG.........................................................191.000.00--1.00--------------
..............................................................................................................................................................................CACTTAAATTTTTTTTTTTTTG......................................................221.000.00-1.00---------------
.................................................................................................................................................................................TTAAATTTTTTTTTTTTTAACA...................................................2240.250.250.25----------------

Antisense strand
AAATACAAATCTTCATATATGGTTTTGTTATATTAACTTTGAGAAATTACTAAATAGCACAAAGTAAGTCCTGTAGTAATTAACAGTTGTAGAATGGATTTTGTAAAACCATAATTTTATCAATGAAAACGTTAAACTTTATATTTTGTAGTTGTTTTTAGGGTAAACACATGACACTTAAATTTTTTTTTTTTTAACAGAACAAAACTCCTTTAGTTAATGAGAGCCTGAAAAAGTTTTTAAATACCAA
..................................................................................................................................................(((...(((((.......)))))....)))..........................................................................
.......................................................................................................................................136.............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189785SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
...............................................................................................................................................................................................TTTTAACAGAACAAAACG......................................... 181.000.00------1.00----------
......AAATCTTCATATATGAGC.................................................................................................................................................................................................................................. 181.000.00----------1.00------
..................................................................................................................................GTTAAACTTTATATTTTTTA.................................................................................................... 201.000.00-----------1.00-----
...................................................................................................................................................................................................AACAGAACAAAACTCCTTTG................................... 201.000.00----1.00------------