ID: uc011egj.1_intron_6_0_chr6_165801943_r.5p
GENE: (17)
chr6:165805935-165806184-


(1)
BRAIN 		(2)
BREAST 		(8)
CELL-LINE 		(1)
CERVIX 		(2)
HELA 		(1)
OTHER 		(2)
SKIN 		(1)
TESTES

Sense strand
GCATGTATGCCATACTTCAGAACAATCACACGCTTTTCACAGACCTTGAGGTGGGTGTGCACTCTTTACCTCTGTTTCTCGTAACCTCAGTGGATTTAATACTGTGTGTCAGGAGCACATTGATGACATGGATTTGTGACATGTTATTCCAAGACAAATTTTGGCTTAATAAATCAATAGTAGCCCATTTTTAGACTCTTGTACCCAAACATTTAGCATATTATTTTGTATAAGAAATGTAGATAAAAGA
........................................................................................(((((......((((((..((((.(((..(((.......)))..))).)))).(((((..((((((....))))))..))))).....))))))..))))).............................................................
..................................................................................83...................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR029128(GSM416757)
H520. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR029130(GSM416759)
DLD2. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.......................................................................................CAGTGGATTTAATACAGAA................................................................................................................................................1955.000.0033.0011.006.003.001.00-------------1.00-
......................................................................................TCAGTGGATTTAATACAGA.................................................................................................................................................1938.000.0025.003.003.002.003.002.00--------------
......................................................................................TCAGTGGATTTAATACAG..................................................................................................................................................185.000.003.00-1.00-------------1.00---
......................................................................................TCAGTGGATTTAATACAGAA................................................................................................................................................205.000.004.00-1.00-----------------
.................................TTTTCACAGACCTTGAG........................................................................................................................................................................................................1713.003.00------2.00----------1.00--
.......................................................................................CAGTGGATTTAATACCGA.................................................................................................................................................183.000.00-3.00------------------
......................................................................................................................................................................................................................................TAAGAAATGTAGATAAAAG.1912.002.00-------2.00------------
.......................................................................................CAGTGGATTTAATACAGC.................................................................................................................................................182.000.00-2.00------------------
.......................................................................................CAGTGGATTTAATACAGG.................................................................................................................................................182.000.001.001.00------------------
..................................................................................................................................................................................................................................TGTATAAGAAATGTAGA.......1731.001.00-----------1.00--------
.......................................................................................CAGTGGATTTAATACTGAA................................................................................................................................................191.000.00---1.00----------------
.......................................................................................CAGTGGATTTAATACAA..................................................................................................................................................171.000.00-1.00------------------
.................................................................................................................................................................................TAGTAGCCCATTTTTTTT.......................................................181.000.00-------------1.00------
......................................................................................TCAGTGGATTTAATACCGA.................................................................................................................................................191.000.00-1.00------------------
.....................ACAATCACACGCTTTTCA...................................................................................................................................................................................................................1811.001.00---------------1.00----
.......................................................................................CAGTGGATTTAATACATAA................................................................................................................................................191.000.00--1.00-----------------
................................CTTTTCACAGACCTTGAG........................................................................................................................................................................................................1811.001.00--------1.00-----------
.........................................................................................................................................................................................................................ATATTATTTTGTATAAGTG..............191.000.00----------1.00---------
.........................................................................................GTGGATTTAATACTGTGAAAA............................................................................................................................................211.000.00---------1.00----------
........................................................................................................................................................................................................................................AGAAATGTAGATAAAAGAAAGT221.000.00------------1.00-------
.......................................................TGTGCACTCTTTACCTCTGT...............................................................................................................................................................................2011.001.00--------------1.00-----
.....................................................................................CTCAGTGGATTTAATGTT...................................................................................................................................................181.000.00-------------------1.00

Antisense strand
GCATGTATGCCATACTTCAGAACAATCACACGCTTTTCACAGACCTTGAGGTGGGTGTGCACTCTTTACCTCTGTTTCTCGTAACCTCAGTGGATTTAATACTGTGTGTCAGGAGCACATTGATGACATGGATTTGTGACATGTTATTCCAAGACAAATTTTGGCTTAATAAATCAATAGTAGCCCATTTTTAGACTCTTGTACCCAAACATTTAGCATATTATTTTGTATAAGAAATGTAGATAAAAGA
........................................................................................(((((......((((((..((((.(((..(((.......)))..))).)))).(((((..((((((....))))))..))))).....))))))..))))).............................................................
..................................................................................83...................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR029128(GSM416757)
H520. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR029130(GSM416759)
DLD2. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
......................................................................................TCAGTGGATTTAATAAGTA................................................................................................................................................. 191.000.00----1.00---------------