ID: uc011efr.1_intron_2_0_chr6_159190451_r
GENE: (1)
chr6:159190401-159190865-


(2)
AGO1.ip
(1)
AGO2.ip
(12)
B-CELL
(4)
BRAIN
(5)
BREAST
(17)
CELL-LINE
(4)
CERVIX
(5)
HEART
(3)
HELA
(6)
LIVER
(3)
OTHER
(1)
RRP40.ip
(40)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
AGGAGCTGGAGAGACAGGCGGTGGATCAGATAAAGAGCCAGGAGCAGCTGGTAGGAATGGCCTGAGTTTCAAGATGCTGAATTATAGAGAGGCTGCTTCTGAGGATGGAAAATGTGACACCTGCCTTGTAATAATTGTCATGACTGGAAGCTGTAAACTGATCTGCTGGGGGGCTGAAGGCAGCTGGTGGGGAAGGGGCTGGGCTGTTGCCAGGGTCACCCATTGAAGGTGGGTGTGGGCATCCAGGAAGAGATGCCGGGGGTGCACAATGGACCCTGCTGGCCATGGAGTGGGGGTGGCGGGGACTCAGGTGTCACGTTGGAGACTGCTTGCCAACACACATGAACACTCATTCACAACTGGACTCCGTTGAAAGGATATCAGAACTGACGTGAGCTTGGCATTCCCTTCCCAGGCTGCGGAGCTTGCAGAATACACTGCCAAGATTGCCCTCCTGGAAGAGGC
...................................................(((((..(((((....((((......))))........)))))..)))))............................................................................................................................................................................................................................................................................................................................................................................
..................................................51.......................................................108...................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040026(GSM532911)
G220N. (cervix)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343335SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
..................................................................................................................................................................................................................................................................................................................................................................CACAACTGGACTCCGTTGAAAGGATATCAGAACTGACGTGAGCTTGGCATTCCCTTCCCAG..................................................61113.0013.0013.00------------------------------------------------------------------------------------------------------
.....................TGGATCAGATAAAGAGCCAGGAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................27112.0012.00--4.008.00---------------------------------------------------------------------------------------------------
.......................................................................................AGAGGCTGCTTCTGAGC.........................................................................................................................................................................................................................................................................................................................................................................179.000.00----1.00-------1.00-------1.00-1.00--------------1.00-----1.001.00-----------1.00----------------------------------1.00-----------
.............................................................................................................................................GACTGGAAGCTGTAAACATC................................................................................................................................................................................................................................................................................................................207.000.00-6.00--------------------------------------------------------------------1.00--------------------------------
................................................................................................TTCTGAGGATGGAAAATGTGACACCTGCCTTGTAATAATTGTCATGACTGGAAGCTGTAAACTGATCTGCTGGGGGGCTGAAGGCA...........................................................................................................................................................................................................................................................................................8615.005.005.00------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCTTGCAGAATACA............................1814.004.00------------1.00-----2.00---------------------1.00--------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGCTTGCAGAATACA............................1914.004.00--------------1.00--1.00----------------1.00--------------------------------------------------1.00-----------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGCTTGCAGAATACAC...........................2014.004.00----------4.00--------------------------------------------------------------------------------------------
.......................................................................................AGAGGCTGCTTCTGAGCTG.......................................................................................................................................................................................................................................................................................................................................................................193.000.00------------1.001.00--------1.00--------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................GAACTGACGTGAGCTTGGCATT............................................................2213.003.00-----------1.00----2.00--------------------------------------------------------------------------------------
.............................................................................................................................................GACTGGAAGCTGTAAACATCC...............................................................................................................................................................................................................................................................................................................212.000.00-2.00-----------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................AGAACTGACGTGAGCTTGGCATTCC..........................................................2512.002.00--------1.00---------------------------------------------------------1.00------------------------------------
............................................................................................................................................TGACTGGAAGCTGTAAACATC................................................................................................................................................................................................................................................................................................................212.000.00-2.00-----------------------------------------------------------------------------------------------------
..................................................GTAGGAATGGCCTGAGTTTCA..........................................................................................................................................................................................................................................................................................................................................................................................................2112.002.00--2.00----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AATACACTGCCAAGATTGCCCTCCTGG.......2712.002.00------2.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................GGTGTCACGTTGGAGACTGCTTGCCAACACACATGAACACTCATTCACAACTGGACTCCGTTGAAAGGATATCAGAACTGACGTGAGCTTGGCATTCCCTTCCCAG..................................................10612.002.00--------------------------------------2.00----------------------------------------------------------------
...........................AGATAAAGAGCCAGGAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002.00-----2.00-------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................AGAACTGACGTGAGCTTGGCATTCCCTTCCCAG..................................................3312.002.00---------------------------------------1.00------------------------------------1.00--------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGCTTGCAGAATACACTG.........................2212.002.00---------1.00----------------------------------------------------------------1.00----------------------------
...........................AGATAAAGAGCCAGGAGCAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002.00-----------------1.00-------1.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................AGAACTGACGTGAGCACG.................................................................182.000.00--------------------------2.00----------------------------------------------------------------------------
.......................GATCAGATAAAGAGCCAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002.00----2.00--------------------------------------------------------------------------------------------------
.......................................................................................AGAGGCTGCTTCTGAGCT........................................................................................................................................................................................................................................................................................................................................................................182.000.00-------------------------------------------------------------1.00-----------1.00-----------------------------
...................................AGCCAGGAGCAGCTGGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................192.000.00-------2.00-----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................AGAACTGACGTGAGCTTGGCATT............................................................2312.002.00---------------------------------------------1.00--------------------------------1.00------------------------
.............................................................................................................................................GACTGGAAGCTGTAAACA..................................................................................................................................................................................................................................................................................................................182.000.00-1.00----------------------------------------------------------------------------------------------1.00------
............................................................................................................................................................................................................................................................................................................................................................................................TCAGAACTGACGTGAGCTTGG................................................................2112.002.00---------------------------------------1.00----------------------------------------1.00----------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCTTGCAGAATACACTGCCAAGATTGCC..............3211.001.00--------1.00----------------------------------------------------------------------------------------------
..................................................GTAGGAATGGCCTGAGTTTCAAGATGC....................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00--1.00----------------------------------------------------------------------------------------------------
...............................................................................................................................GTAATAATTGTCATGACTGGAAGCTGTAAAC...................................................................................................................................................................................................................................................................................................................3111.001.00------------------------1.00------------------------------------------------------------------------------
......TGGAGAGACAGGCGGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................171.000.00----------------------------------------------------------------------------------------1.00--------------
..........................................................................................................................GCCTTGTAATAATTGAAA.....................................................................................................................................................................................................................................................................................................................................181.000.00---------------------------------------------------------------------1.00---------------------------------
....................................................................................................................................................................................................................................GTGGGTGTGGGCATCCAGGAAGAGATGCCGG..............................................................................................................................................................................................................3111.001.00---------------------------------1.00---------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................ATGGAGTGGGGGTGGCCTAG.................................................................................................................................................................201.000.00-------1.00-----------------------------------------------------------------------------------------------
.............................................AGCTGGTAGGAATGGCCTGAGT..............................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00---------1.00---------------------------------------------------------------------------------------------
..............CAGGCGGTGGATCAGATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------------------------------1.00--------
.....................................................................................................................................................................................AGCTGGTGGGGAAGGGAGT.........................................................................................................................................................................................................................................................................191.000.00------1.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TGGGTGTGGGCATCCAGGAAGAGATG..................................................................................................................................................................................................................2611.001.00----------------1.00--------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................TATCAGAACTGACGTGAGCTTGGCATT............................................................2711.001.00-------------1.00-----------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................GGGGTGGCGGGGACTTTA...........................................................................................................................................................181.000.00--1.00----------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................GTGGGGAAGGGGCTGGGCTA...................................................................................................................................................................................................................................................................201.000.00----------------------------------------------------------------------------------1.00--------------------
......................................................................................................................................TTGTCATGACTGGAAGCTGT.......................................................................................................................................................................................................................................................................................................................2011.001.00--------------------------------------------------------------------1.00----------------------------------
.....................................................................CAAGATGCTGAATTATAGAGAGGCT...................................................................................................................................................................................................................................................................................................................................................................................2511.001.00------------------------1.00------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGAGCTTGCAGAATACACTGCCAAGATTGC...............3311.001.00-------------------------------------------------1.00-----------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTTGCAGAATACACT..........................1811.001.00-----------------------------1.00-------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGAGCTTGCAGAATACACTGCCA......................2611.001.00------------------------------1.00------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................TCAGAACTGACGTGAGCTTGGCA..............................................................2311.001.00-----------------------------------------------1.00-------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGGAGCTTGCAGAATACACT..........................2311.001.00-----1.00-------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGGAGCTTGCAGAATACACTGCC.......................2611.001.00--------------------------------1.00----------------------------------------------------------------------
................................................................................................TTCTGAGGATGGAAAATGTG.............................................................................................................................................................................................................................................................................................................................................................2011.001.00------------------------------------------------------------1.00------------------------------------------
..................................................GTAGGAATGGCCTGAGTTTCAAGATGCTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................3211.001.00------------------------------------------------1.00------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................GGTGTCACGTTGGAGACTGCTTGC....................................................................................................................................2411.001.00--------1.00----------------------------------------------------------------------------------------------
....................................................................................................GAGGATGGAAAATGTGACACCTGCC....................................................................................................................................................................................................................................................................................................................................................2511.001.00------------------------------------1.00------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGCTTGCAGAATAC.............................1811.001.00--------------1.00----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCGGAGCTTGCAGA.................................1811.001.00-----------------------------------------1.00-------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................TGGCGGGGACTCAGG..........................................................................................................................................................1511.001.00-----------------------------------1.00-------------------------------------------------------------------
.............................ATAAAGAGCCAGGAGCAGCTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00---------------1.00---------------------------------------------------------------------------------------
.........................................................................................................TGGAAAATGTGACACC........................................................................................................................................................................................................................................................................................................................................................1621.001.00---1.00---------------------------------------------------------------------------------------------------
................................................TGGTAGGAATGGCCTGGCG..............................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-------1.00-----------------------------------------------------------------------------------------------
..........................CAGATAAAGAGCCAGGAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-----------1.00-------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................TGTCACGTTGGAGACTGCTTGC....................................................................................................................................2211.001.00---------------------------------1.00---------------------------------------------------------------------
.................................................................................................................................................................................................................................................................GGGGGTGCACAATGGACCCTGCTGGC......................................................................................................................................................................................2611.001.00------------------------------1.00------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGCTTGCAGAATACACT..........................2111.001.00-----------1.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................TATCAGAACTGACGTGAGCTTGGCA..............................................................2511.001.00-----------------------------------------------------------1.00-------------------------------------------
.................................................................................TTATAGAGAGGCTGCTTCTGAGGATGGAAAA.................................................................................................................................................................................................................................................................................................................................................................3111.001.00--------1.00----------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................CTGGACTCCGTTGAAAGGA.......................................................................................1911.001.00-------------------------------------------------------1.00-----------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................GAAAGGATATCAGAACTGACG.........................................................................2111.001.00---------------------1.00---------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................GAACTGACGTGAGCTTGGCATTCCCTTCCCAG..................................................3211.001.00---------------------------1.00---------------------------------------------------------------------------
..................................................GTAGGAATGGCCTGAGTCAAA..........................................................................................................................................................................................................................................................................................................................................................................................................211.000.00--------------------------------1.00----------------------------------------------------------------------
..................................................................................................................................ATAATTGTCATGACTGG..............................................................................................................................................................................................................................................................................................................................1711.001.00-----------------------------------------------------------------------1.00-------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGCTTGCAGAATG..............................171.000.00---------1.00---------------------------------------------------------------------------------------------
....................................................................................................................................................................................................GGCTGGGCTGTTGCCGCC...........................................................................................................................................................................................................................................................181.000.00-----------------------1.00-------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................AAAGGATATCAGAACTCTG..........................................................................191.000.00-----------------------------------1.00-------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TGGAGTGGGGGTGGCGGGGACTCAGGGGTC......................................................................................................................................................301.000.00------1.00------------------------------------------------------------------------------------------------
...........................................................GCCTGAGTTTCAAGATGCTGAATTATAGAGAGG.....................................................................................................................................................................................................................................................................................................................................................................................3311.001.00---------------------------1.00---------------------------------------------------------------------------
............................................................................................................................................................................................GGGGAAGGGGCTGGGCGG...................................................................................................................................................................................................................................................................181.000.00-------------------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATACACTGCCAAGATTGCC..............2211.001.00------------------------------------------1.00------------------------------------------------------------
.........................................................................ATGCTGAATTATAGAGAGGCTGCTTCTGA...........................................................................................................................................................................................................................................................................................................................................................................2911.001.00-----------------------------------------------------------------------------1.00-------------------------
..............CAGGCGGTGGATCAGATAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00----------------------------------1.00--------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................AGGATATCAGAACTGACGTGAGCT...................................................................2411.001.00-------------------------------------1.00-----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................GGATATCAGAACTGACGTGAGCTTGGA...............................................................271.000.00----------------------------------------------------------1.00--------------------------------------------
...........................................................................................................................CCTTGTAATAATTGTGAA....................................................................................................................................................................................................................................................................................................................................181.000.00---------------------------------------------------------1.00---------------------------------------------
.......................GATCAGATAAAGAGCCAGGAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-----------1.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................GTTGAAAGGATATCAGAACTGACGTG.......................................................................2611.001.00----------------------------1.00--------------------------------------------------------------------------
.......................GATCAGATAAAGAGCCAGGAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-----------------1.00-------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGGAGCTTGCAGAAT...............................1811.001.00-----1.00-------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................TATCAGAACTGACGTGAGCTTGGC...............................................................2411.001.00--------------------1.00----------------------------------------------------------------------------------
.......................GATCAGATAAAGAGCCAGGAGCAGACG...............................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00---------------------------------------------------------------------------------------1.00---------------
.................................................................................................................................................................................................................................................................................................................................................................TCACAACTGGACTCCATAG.............................................................................................191.000.00----------------------------------------------1.00--------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGCTTGCAGAATACACTGCCA......................2511.001.00---------1.00---------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................TCAGAACTGACGTGAGCTTGGCAT.............................................................2411.001.00---------------------------------------------------------------------------------------------1.00---------
........................................................................................................................................GTCATGACTGGAAGCTGT.......................................................................................................................................................................................................................................................................................................................1811.001.00-------------------------1.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCGGAGCTTGCAGAA................................1911.001.00-----1.00-------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................ACGTGAGCTTGGCATTCCCTTCCCC...................................................251.000.00-----------------------------------------------------------------------------------------1.00-------------
........................................................................................................................................GTCATGACTGGAAGCTGTAAACTGATCTGC...........................................................................................................................................................................................................................................................................................................3011.001.00----------------------------1.00--------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................AAAGGATATCAGAACTGACGTGAG.....................................................................2411.001.00---------------1.00---------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................TATCAGAACTGACGTGAGCTTGGCAT.............................................................2611.001.00---------------------1.00---------------------------------------------------------------------------------
..........................................................................................................................................CATGACTGGAAGCTGTAAACATC................................................................................................................................................................................................................................................................................................................231.000.00-----------------------------------------------------1.00-------------------------------------------------
...................................................................................................................................................AAGCTGTAAACTGATCTGCTGGGGG.....................................................................................................................................................................................................................................................................................................2511.001.00----------------------------------------1.00--------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................AGGATATCAGAACTGACGTGAGCTTGGCAT.............................................................3011.001.00------------------------------------------------------------------------------------1.00------------------
..........................................................................................................................................................................................................................................................................................................................................................................................TATCAGAACTGACGTGAGCTTGG................................................................2311.001.00--1.00----------------------------------------------------------------------------------------------------
..........................CAGATAAAGAGCCAGGAGCAGCTGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................261.000.00-----------------------------1.00-------------------------------------------------------------------------
.........AGAGACAGGCGGTGGGTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--------------1.00----------------------------------------------------------------------------------------
........................ATCAGATAAAGAGCCAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---------------1.00---------------------------------------------------------------------------------------
........................................................................................................................................................................................TGGTGGGGAAGGGGCTGGGCTGT..................................................................................................................................................................................................................................................................2311.001.00------------------------------------------------------1.00------------------------------------------------
............................................................................................................................................................................................GGGGAAGGGGCTGGGCCGGG.................................................................................................................................................................................................................................................................201.000.00------------------------------------------------------------------------1.00------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGAGCTTGCAGAATACACT..........................2211.001.00------------------------------------------------------------------------------------------1.00------------
............................................................................................................................................................................................GGGGAAGGGGCTGGGCGGCA.................................................................................................................................................................................................................................................................201.000.00-------------------1.00-----------------------------------------------------------------------------------
..................................................................................................................................ATAATTGTCATGACTGGAAGCTCTG......................................................................................................................................................................................................................................................................................................................251.000.00----------------------------------------------------1.00--------------------------------------------------
.............................................................................................................AAATGTGACACCTGCATG..................................................................................................................................................................................................................................................................................................................................................181.000.00-----------------------------------------------------------------------------------------------1.00-------
.................................................................................................................................................................................................AGGGGCTGGGCTGTTGTCG.............................................................................................................................................................................................................................................................191.000.00------1.00------------------------------------------------------------------------------------------------
.................................................................................................TCTGAGGATGGAAAATGTGACACC........................................................................................................................................................................................................................................................................................................................................................2411.001.00------------------------------------1.00------------------------------------------------------------------
.......................................................................................AGAGGCTGCTTCTGAGCTGC......................................................................................................................................................................................................................................................................................................................................................................201.000.00----1.00--------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................CGGGGACTCAGGTGTGTA....................................................................................................................................................181.000.00--------------------------------------------------1.00----------------------------------------------------
............GACAGGCGGTGGATCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1620.500.50--------------------------------------------------------------------------------------------------0.50----
.................................................GGTAGGAATGGCCTGAG...............................................................................................................................................................................................................................................................................................................................................................................................................1730.330.33-----------------------------------------0.33-------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATTGCCCTCCTGG.......1630.330.33---------------------------------------------------------------------------------------------------0.33---
......................GGATCAGATAAAGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................1640.250.25----------------------------------------------------------------------------------------------------0.25--
....................................................................................................................................................................................................................................................................................................................................................................................................GACGTGAGCTTGGCA..............................................................1540.250.25-----------------------------------------------------------------------------------------------------0.25-
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGCTTGCAGAA................................1590.110.11------------------------------------------------------------------------------------------------------0.11

Antisense strand
AGGAGCTGGAGAGACAGGCGGTGGATCAGATAAAGAGCCAGGAGCAGCTGGTAGGAATGGCCTGAGTTTCAAGATGCTGAATTATAGAGAGGCTGCTTCTGAGGATGGAAAATGTGACACCTGCCTTGTAATAATTGTCATGACTGGAAGCTGTAAACTGATCTGCTGGGGGGCTGAAGGCAGCTGGTGGGGAAGGGGCTGGGCTGTTGCCAGGGTCACCCATTGAAGGTGGGTGTGGGCATCCAGGAAGAGATGCCGGGGGTGCACAATGGACCCTGCTGGCCATGGAGTGGGGGTGGCGGGGACTCAGGTGTCACGTTGGAGACTGCTTGCCAACACACATGAACACTCATTCACAACTGGACTCCGTTGAAAGGATATCAGAACTGACGTGAGCTTGGCATTCCCTTCCCAGGCTGCGGAGCTTGCAGAATACACTGCCAAGATTGCCCTCCTGGAAGAGGC
...................................................(((((..(((((....((((......))))........)))))..)))))............................................................................................................................................................................................................................................................................................................................................................................
..................................................51.......................................................108...................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040026(GSM532911)
G220N. (cervix)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343335SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
.....................................................................................................................................................................................................................................................GGAAGAGATGCCGGGGA........................................................................................................................................................................................................... 179.000.00----1.00--------1.00-----------------2.00--------------------------------1.00--------------1.00------1.00-----1.00----1.00-----
............................................................................................................................................................................................................................................................................................................................................................................................................CTTGGCATTCCCTTCAGCA.................................................. 191.000.00-------------------------------------------------------------------1.00-----------------------------------
.................................................................................................................................................................................................................................................................................................GTGGGGGTGGCGGGGACAA............................................................................................................................................................. 191.000.00-----------------------1.00-------------------------------------------------------------------------------
.......................TCCTGGCTCTTTATCTGATC...................................................................................................................................................................................................................................................................................................................................................................................................................................... 2011.001.00------------1.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................................GGGAAGGGGCTGGGCTGGCG................................................................................................................................................................................................................................................................ 201.000.00---------------------------------------------------------------1.00---------------------------------------
.........................................................................................................................................................................................................................................................GAGATGCCGGGGGTGCA....................................................................................................................................................................................................... 171.000.00-----------------------------------------------------------------1.00-------------------------------------
.......................................AGGAGCAGCTGGTAGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................ 181.000.00---------------------------------------------------------------------------------1.00---------------------
.................................................................................................................................................................................................................................................................................................GTGGGGGTGGCGGGGACATA............................................................................................................................................................ 201.000.00---------------------------------------------------------------------------1.00---------------------------
.............................................................................................................................................................CTGATCTGCTGGGGGGGC.................................................................................................................................................................................................................................................................................................. 181.000.00--------------------------------------------------------------1.00----------------------------------------