ID: uc011eep.1_intron_0_0_chr6_151561195_f
GENE: (1)
chr6:151561145-151561568+


(2)
AGO2.ip 		(1)
B-CELL 		(5)
BRAIN 		(9)
BREAST 		(18)
CELL-LINE 		(6)
CERVIX 		(5)
HEART 		(2)
HELA 		(2)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(11)
SKIN 		(3)
UTERUS

Sense strand
TCGCTCCTGGGCGAGCTGAAAGTCGGCTGCAGCAGAAGCTCCTGCCTTGGGTGATCCATCATTTAATAAACCCCAGAGAATCCAGTGTCCCCGGCAGGCTTTTTGCTCCCCTGCTCTCTTGCCTTCTGAGGCCCTGGGTCGTCCCCGCAGCTCTAGTCGCCCTGTTAGAAACGGGAGGCGCCCGAGGGCCGGGTGGGCGGCTGCCTGGACCTGGGCTGGCGCGTCGCAGCGCCTCTGGTCCCGGCAGCCTGGGGGCAGATGCTGCTGCAGGGCGTGTCTGGGGCTGTGCTCATGTGATGAAGCGAGGGAAAAACCGGGGGGAGGGGGGCGGAGGCTAAGAGGTGGCCTTTTTTTTTTTTTCCTTTTCTTTTAAGGAGTTTGCCGCGAGCGCGTCTCCTTCATTCGCAGGCTGGGCGCGTTCGCA
...........................................................................................................................................................................................................................................................................................................................((((..((..(((..(((((((.....)))))))..)))..))..))))............................................................
...........................................................................................................................................................................................................................................................................................................................316.......................................................374................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189787SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		TAX577580(Rovira)
total RNA. (breast)		SRR040011(GSM532896)
G529T. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037937(GSM510475)
293cand2. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR040029(GSM532914)
G026T. (cervix)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577740(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR040006(GSM532891)
G601N. (cervix)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		GSM339996(GSM339996)
hues6Neuron. (cell line)		SRR040012(GSM532897)
G648N. (cervix)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		TAX577589(Rovira)
total RNA. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR040024(GSM532909)
G613N. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................................................................................................................................................................................................................................................................................................GAGGGGGGCGGAGGCTCTCC....................................................................................2018.000.00--16.00------2.00--------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTTCCTCAAG.........................................................227.000.00-1.00--2.00-4.00-----------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTTCCTTTTCTTTTAAG..................................................2914.004.00-1.00--1.001.00--1.00---------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTTCCTTTAAG........................................................234.000.00-2.00----2.00-----------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTTTTCCTTGAG.........................................................254.000.00---4.00--------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTCCTTTTCTTTTAAG..................................................2212.002.00----2.00-------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTTAGC...............................................................192.000.001.00--1.00--------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................TCGCAGGCTGGGCGCGTTCGC.2112.002.00----------------------1.00--------------------------1.00----------------
...........................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTCCTTTTCTATG.....................................................242.000.00------2.00-----------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................TTTTTCCTTTTCTTTTAAGT.................................................202.000.00-----2.00------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................CGGGGGGAGGGGGGCATC............................................................................................1802.001.00--------------------2.00---------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTTCCTAATT.........................................................222.000.00------1.00-1.00---------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTCCTTTTCTTTGAGT..................................................242.000.00---2.00--------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTCCTTTTCTTTCAG...................................................242.000.00-2.00----------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................TCCTTCATTCGCAGGCTGGGAA........222.000.00---------------------2.00--------------------------------------------
........GGGCGAGCTGAAAGTCGG..............................................................................................................................................................................................................................................................................................................................................................................................................1812.002.00-------2.00----------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................ACCGGGGGGAGGGGGGAAGG............................................................................................202.000.002.00-----------------------------------------------------------------
...........................................................................................................................................................................CGGGAGGCGCCCGAGGC............................................................................................................................................................................................................................................172.000.00---------------2.00--------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTTTCTCC.............................................................211.000.001.00-----------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTCCTTTTCTTTGG....................................................251.000.001.00-----------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................CGGGGGGAGGGGGGC...............................................................................................1501.001.00---------------------------------------------1.00--------------------
...........................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTCCTTTTCTTTAAG...................................................261.000.00----1.00-------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCTGGGCGCGTTCA..171.000.00--------------------------------------------------------1.00---------
.................................................................................................................................................................................................................................................................GATGCTGCTGCAGGGCGTGTCTGGGG.............................................................................................................................................2611.001.00----------1.00-------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTTCCTCAAT.........................................................221.000.00--------1.00---------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................TTCTTTTAAGGAGTTTGCCGCGAGCG..................................2611.001.00------------------------1.00-----------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTTCCTTTTTAAG......................................................251.000.00-----1.00------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTCCTTTTCGGT......................................................231.000.001.00-----------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTCCTTTTCTTTTAATG.................................................241.000.00-1.00----------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTTCCTTTCAAC.......................................................241.000.001.00-----------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTTCCTTTTCTTAAG....................................................271.000.00----1.00-------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCAGGCTGGGCG........1611.001.00----------------------------------------------1.00-------------------
............GAGCTGAAAGTCGGCTGCAGCAGA....................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00----------1.00-------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTCCTTTTCTTTCCC...................................................261.000.00---1.00--------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTTCCTTTTACGG......................................................251.000.00-1.00----------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTGGAC...............................................................191.000.001.00-----------------------------------------------------------------
...................................................................................................................................................................................................................................AGCGCCTCTGGTCCCTTA...................................................................................................................................................................................181.000.00-------------------1.00----------------------------------------------
.............................................................................................................................................................................................................................................GTCCCGGCAGCCTGGGGGCAGATG...................................................................................................................................................................2411.001.00----------1.00-------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTCCTTTTCTTTAGAT..................................................271.000.00-----1.00------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTGTTC...............................................................191.000.001.00-----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................AACCGGGGGGAGGGGGGGGTA............................................................................................211.000.00-------1.00----------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTCCTTTTCTTGTG....................................................211.000.001.00-----------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTCCTTTTCTTTA.....................................................241.000.00---1.00--------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTTCCTTTTAAG.......................................................241.000.00-1.00----------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTCCTTTTCTTGTA....................................................221.000.00---1.00--------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTTCCTTTTCTGGC.....................................................261.000.001.00-----------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTTTTCCAGG...........................................................231.000.00---1.00--------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCAGGCTGGGCGCGT.....1811.001.00-----------------------1.00------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTTTTCTC.............................................................211.000.001.00-----------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................GAGGGGGGCGGAGGCTCTC.....................................................................................191.000.00--1.00---------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTCCTTTTCTTTTAAG..................................................2411.001.00-1.00----------------------------------------------------------------
.........................................................................................................................................................................................................................................................TGGGGGCAGATGCTGCTGCAGG.........................................................................................................................................................2211.001.00-------1.00----------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................TTTTTTCCTTTTCTTTTAATAAG...............................................231.000.00-1.00----------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTTTCACC.............................................................211.000.00---1.00--------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTCCTTTTCTTTTGCTC.................................................261.000.001.00-----------------------------------------------------------------
....TCCTGGGCGAGCTGAAAGTCGGCTGCCGC.......................................................................................................................................................................................................................................................................................................................................................................................................291.000.00------------------------------1.00-----------------------------------
.....CCTGGGCGAGCTGAAAGTCGG..............................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-------------1.00----------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTTTTCTTGG...........................................................231.000.001.00-----------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................CTTTTTTTTTTTTTCCTTTTCAAAG.....................................................251.000.00-1.00----------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................CTTTTTTTTTTTTTCCTTTTCTTTAAG...................................................271.000.00-1.00----------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCTGGGCGCGTTCGC.1811.001.00------------1.00-----------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTCCTTTTCTCAGT....................................................251.000.00-1.00----------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTCCTTTTCTTTCTAG..................................................271.000.00----1.00-------------------------------------------------------------
...........................................................................................................................................................................CGGGAGGCGCCCGAGGCCTT.........................................................................................................................................................................................................................................201.000.00----------------------------------1.00-------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTGGC................................................................181.000.001.00-----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................GGCCTTTTTTTTTTTTTCCTTTTTTT.......................................................261.000.001.00-----------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTCCTTTTCTTTGG....................................................221.000.00---1.00--------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTTTCTTA.............................................................211.000.001.00-----------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTCCTTTTCTTTTAACAG................................................241.000.00-1.00----------------------------------------------------------------
..................AAAGTCGGCTGCAGCAGAAGCT................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----------------------------------------------------------1.00-------
..............GCTGAAAGTCGGCTGCAG........................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00------------1.00-----------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CTTTTAAGGAGTTTGCCG........................................1811.001.00----------------------------------------------------1.00-------------
...................................................................................................................................................................................................................................................................................................................................................AGGTGGCCTTTTTTTTTTTTTATTT............................................................251.000.001.00-----------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTTTTCTTAC...........................................................231.000.001.00-----------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTTTTCGAG............................................................221.000.00---1.00--------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................CTTTTTTTTTTTTTCCTTTTCTTGGC....................................................261.000.001.00-----------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTTCCTCACG.........................................................221.000.00--------1.00---------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTTCCTTTTATCG......................................................251.000.00-1.00----------------------------------------------------------------
...................AAGTCGGCTGCAGCAGAAGC.................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-----------------------------------------------------1.00------------
.............................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTCCTTTTCTTTTAAG..................................................2511.001.00-1.00----------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTCCTTTTCTTTTAAG..................................................2711.001.00-1.00----------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................GGGGGAGGGGGGCGGAGTT.........................................................................................191.000.00------------------------------------------------1.00-----------------
................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTCCTTTTCTTTGTAA..................................................221.000.00-----1.00------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................AAACCGGGGGGAGGGGGGCGGAGG..........................................................................................2411.001.00---1.00--------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................TTCATTCGCAGGCTGGGCGCG......2111.001.00--------------------------------------------1.00---------------------
.............................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTCCTTTTCTTTGG....................................................231.000.001.00-----------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................CTTTTTTTTTTTTTCCTTTTCAT.......................................................231.000.00-1.00----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................AACCGGGGGGAGGGGCG................................................................................................171.000.00------------------------------------1.00-----------------------------
................................................................................................................................................................................................................ACCTGGGCTGGCGCGGGA......................................................................................................................................................................................................181.000.00-------------------------------------------------------1.00----------
................................................................................................................................................................................................................................................................................................................................GAGGGGGGCGGAGGCCCT......................................................................................181.000.00--1.00---------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTTAAAC..............................................................201.000.001.00-----------------------------------------------------------------
.............AGCTGAAAGTCGGCTGCAGCAGA....................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-----------1.00------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTCCTTTTCTTTTAGAG.................................................261.000.001.00-----------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................CCTTTTTTTTTTTTTCCTTTTAAAG......................................................251.000.00-----1.00------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................AGAGGTGGCCTTTTTTTTTTTTTCCCTT...........................................................281.000.001.00-----------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTCCTTTTCTTTTATG..................................................261.000.00-----1.00------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTCCTTTTCTTTCCAG..................................................261.000.00-1.00----------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................AGGGGGGCGGAGGCTCTCC....................................................................................191.000.00---------1.00--------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................GCCTTTTTTTTTTTTTCCTTTTTTTT......................................................261.000.001.00-----------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTCCTTTTCTGGTG....................................................251.000.00---1.00--------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................AGGTGGCCTTTTTTTTTTCT.................................................................201.000.00-----------------------------------1.00------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTTTTCTCTC...........................................................231.000.00---1.00--------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................TTTTTTTCCTTTTCTTTTATTCT................................................231.000.00-----1.00------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTCCTTTTCTTTTAG...................................................261.000.00----1.00-------------------------------------------------------------
...CTCCTGGGCGAGCTGAAAGTCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-----------------------1.00------------------------------------------
..................AAAGTCGGCTGCAGCAGAAGCTCCT.............................................................................................................................................................................................................................................................................................................................................................................................2511.001.00--------------------------------1.00---------------------------------
..............................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTCCTTTTCTTTAAG...................................................231.000.00----1.00-------------------------------------------------------------
.CGCTCCTGGGCGAGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................171.000.00-----------------1.00------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTCCTTTTCTTTTGCTC.................................................251.000.001.00-----------------------------------------------------------------
....TCCTGGGCGAGCTGAAAGTC................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00---------------------------------------------------------1.00--------
.................GAAAGTCGGCTGCAGCAGAAGCTCCG.............................................................................................................................................................................................................................................................................................................................................................................................261.000.00---------------------------1.00--------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTTTTCTTTC...........................................................231.000.001.00-----------------------------------------------------------------
.CGCTCCTGGGCGAGCGA......................................................................................................................................................................................................................................................................................................................................................................................................................171.000.00-----------------1.00------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................TCGCAGGCTGGGCGCGTTC...1911.001.00-------------------------------------1.00----------------------------
...................................................................................................................................................................................................................................................................................................................................................................TTTTTCCTTTTCTTTTAAGC.................................................201.000.00-----1.00------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCTGGGCGCGTTCG..1720.500.50-----------0.50------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTTTTCCTTTT..........................................................2420.500.500.50-----------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTTTTCCT.............................................................2190.330.33---0.33--------------------------------------------------------------
....TCCTGGGCGAGCTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................1560.170.17-----------------------------------------------------------------0.17
....................................................................................................................................................................................................................................................................................................................................................................TTTTCCTTTTCTTTTAAG..................................................1870.140.14----0.14-------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................TTTTCCTTTTCTTTTAAGTTTA..............................................2270.140.14-----0.14------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................TGGCCTTTTTTTTTTTTTCCTCT...........................................................2390.110.33---0.11--------------------------------------------------------------

Antisense strand
TCGCTCCTGGGCGAGCTGAAAGTCGGCTGCAGCAGAAGCTCCTGCCTTGGGTGATCCATCATTTAATAAACCCCAGAGAATCCAGTGTCCCCGGCAGGCTTTTTGCTCCCCTGCTCTCTTGCCTTCTGAGGCCCTGGGTCGTCCCCGCAGCTCTAGTCGCCCTGTTAGAAACGGGAGGCGCCCGAGGGCCGGGTGGGCGGCTGCCTGGACCTGGGCTGGCGCGTCGCAGCGCCTCTGGTCCCGGCAGCCTGGGGGCAGATGCTGCTGCAGGGCGTGTCTGGGGCTGTGCTCATGTGATGAAGCGAGGGAAAAACCGGGGGGAGGGGGGCGGAGGCTAAGAGGTGGCCTTTTTTTTTTTTTCCTTTTCTTTTAAGGAGTTTGCCGCGAGCGCGTCTCCTTCATTCGCAGGCTGGGCGCGTTCGCA
...........................................................................................................................................................................................................................................................................................................................((((..((..(((..(((((((.....)))))))..)))..))..))))............................................................
...........................................................................................................................................................................................................................................................................................................................316.......................................................374................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189787SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		TAX577580(Rovira)
total RNA. (breast)		SRR040011(GSM532896)
G529T. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037937(GSM510475)
293cand2. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR040029(GSM532914)
G026T. (cervix)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577740(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR040006(GSM532891)
G601N. (cervix)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		GSM339996(GSM339996)
hues6Neuron. (cell line)		SRR040012(GSM532897)
G648N. (cervix)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		TAX577589(Rovira)
total RNA. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR040024(GSM532909)
G613N. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................................................................................................................................CGCCTCTGGTCCCGGCAGCCTT............................................................................................................................................................................. 222.000.00------------------1.00------1.00----------------------------------------
.................................................................................................................................................................................................................................................ATCTGCCCCCAGGCTGCCG.................................................................................................................................................................... 1912.002.00----------------2.00-------------------------------------------------
.....................................................................................................................................................................................................................................CGCCTCTGGTCCCGGCAGCCTTT............................................................................................................................................................................ 231.000.00----------------------------1.00-------------------------------------
.................................................................................................................................................................................CCCACCCGGCCCTCGGGCGC................................................................................................................................................................................................................................... 2011.001.00------------------1.00-----------------------------------------------
........................................................................................................................................................................................................CAGCCCAGGTCCAGGCAG.............................................................................................................................................................................................................. 1811.001.00--------------1.00---------------------------------------------------
.......................................................................................................................................................................................................................................CAGGCTGCCGGGACCAGAGG............................................................................................................................................................................. 2011.001.00----------------------1.00-------------------------------------------
..................................................................................................................................................................................................................................CAGCGCCTCTGGTCCTGGA................................................................................................................................................................................... 191.000.00-------------------1.00----------------------------------------------
....................................................................................................................................................AGCTCTAGTCGCCCTGTTAGACTG............................................................................................................................................................................................................................................................ 241.000.00------------------------1.00-----------------------------------------
....................................................................................................................................................................................................................................AGGCTGCCGGGACCAGAGGCGC.............................................................................................................................................................................. 2211.001.00---------------------------------------------------1.00--------------
....................................................................................................................................................................................................................................................................................................................................................................................................TGCGAATGAAGGAGACGCG................. 1911.001.00------------------------------------------1.00-----------------------
...................................................................................................CAAGAGAGCAGGGGAGCAAAAA............................................................................................................................................................................................................................................................................................................... 2211.001.00-------------------------------------------------------------1.00----
...........................................................................................................................................................................................................................................................................................................................GGGGGGAGGGGGGCGACGC.......................................................................................... 191.000.00-----------1.00------------------------------------------------------
....................................................................................................................CCCAGGGCCTCAGAAGGCAAGA.............................................................................................................................................................................................................................................................................................. 2211.001.00------------------------------------------------------1.00-----------
...........................................................................................................................GACGACCCAGGGCCTCAGAA......................................................................................................................................................................................................................................................................................... 2011.001.00-------------------------------1.00----------------------------------
.............................................................................................................................................CGACTAGAGCTGCGGGGA......................................................................................................................................................................................................................................................................... 1811.001.00-----------------------------------------1.00------------------------
................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTCCTTTTCTTTTATT.................................................. 221.000.00-----------------------------1.00------------------------------------
.......................................TCCTGCCTTGGGTGACTCG.............................................................................................................................................................................................................................................................................................................................................................................. 191.000.00--------------------------------------------------1.00---------------
......................................................................................................................................................................................................................................................................................................................................................................................................CTGCGAATGAAGGAGACG................ 1811.001.00--------------------------1.00---------------------------------------
...........................................................................................................................................................................................................................................................................................................................GGGGGGAGGGGGGCGGATTCT........................................................................................ 211.000.00-------------------------------------------1.00----------------------
.......................................................................................................................................................................................................................................CCTCTGGTCCCGGCAGCCTAG............................................................................................................................................................................ 211.000.00-----------------------------------------------------------1.00------
............................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTCCTTTTCTTTT..................................................... 231.000.00------------------------------------------------------------1.00-----
..............................................................................................................................................................................................................................................................................GCACAGCCCCAGACACGCC....................................................................................................................................... 1911.001.00-----------------------------------------------1.00------------------
..................................................................................................................................................ACAGGGCGACTAGAGCTGC................................................................................................................................................................................................................................................................... 1911.001.00---------------------------------------1.00--------------------------
.....................................................................................................................................................................................................................................GCTGCCGGGACCAGAGGCG................................................................................................................................................................................ 1911.001.00-------------1.00----------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................GGGGAGGGGGGCGGAACGC........................................................................................ 191.000.00--------------------------------------1.00---------------------------
...........................................................................................................................................................................................................................................................................................................................GGGGGGAGGGGGGCGGACGTT........................................................................................ 211.000.00--------------1.00---------------------------------------------------
.....................................................................................................................................................................................................................................CGCCTCTGGTCCCGGCAGCCTTTT........................................................................................................................................................................... 241.000.00----------------------------------------1.00-------------------------
.............................................................................................................................................................................................................................................................................................................................GGGGAGGGGGGCGGAGACGC....................................................................................... 201.000.00---------------------------------1.00--------------------------------
..............................................................................................................................................................CCGTTTCTAACAGGGC.......................................................................................................................................................................................................................................................... 1620.500.50---------------------------------------------------------------0.50--
.............................................................................................................AGAAGGCAAGAGAGCAGG......................................................................................................................................................................................................................................................................................................... 1840.500.50-------------------------0.50----------------------------------------
..............................................................................................................................................................................................................................................................................CAGCCCCAGACACGCC.......................................................................................................................................... 1640.500.50----------------------------------------------------------------0.50-
.........................................................................................................GGCAAGAGAGCAGGGGAG............................................................................................................................................................................................................................................................................................................. 1820.500.50--------------------------------------------------------------0.50---