ID: uc011dyo.1_intron_4_0_chr6_74346431_r.5p
GENE: SLC17A5(3)
chr6:74351214-74351463-


(1)
B-CELL 		(2)
BRAIN 		(5)
BREAST 		(15)
CELL-LINE 		(1)
FIBROBLAST 		(1)
HEART 		(1)
HELA 		(6)
LIVER 		(2)
OTHER 		(4)
SKIN 		(1)
TESTES

Sense strand
TAGGAGTTGGACCACTCATTGTACTCAGAGCACTAGAAGGACTAGGAGAGGTAATTTTCTTTTCTCTCTTGTTTTACTTCTTACCGTGTGTCTCCTTCTCTTCTTCTTAAAGATGTCATTCTTTGGTATGAATATGAACCAAAAAATAACGTTGGATGATAACAGGGGTTTATTTTTTAGAGAAAGGACTAACTAGAAAATTACCTGAATAGATTTTGTTTGTGGTAAATGAGGTCTCTAGTAGGAGCAC
......................................................................((((...(((.(((((.(((......(((...........)))...)))....))))).)))...))))...............................................................................................................
............................................................61.......................................................................................150..................................................................................................
SizePerfect hitTotal NormPerfect NormSRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR029128(GSM416757)
H520. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR029130(GSM416759)
DLD2. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR343334SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
..............................................................................................................................TATGAATATGAACCAAAAGA........................................................................................................202155.506.0050.0033.0016.00-20.0019.008.004.003.00---2.00------------------------0.50---
..............................................................................................................................TATGAATATGAACCAAAAG.........................................................................................................19221.506.008.001.008.00-1.50--1.001.00---------------------1.00----------
..............................................................................................................................TATGAATATGAACCAAAAGAAT......................................................................................................22216.006.00---16.00-------------------------------------
..............................................................................................................................TATGAATATGAACCAAAAGAA.......................................................................................................21214.506.006.004.00--2.50-1.00-1.00--------------------------------
..............................................................................................................................TATGAATATGAACCAAAATC........................................................................................................2027.006.00---7.00-------------------------------------
..............................................................................................................................TATGAATATGAACCAAAA..........................................................................................................1826.006.000.50-2.50-1.50-1.000.50---------------------------------
...............................................................................................................................ATGAATATGAACCAAAAGA........................................................................................................196.000.00-1.003.00---1.001.00---------------------------------
..............................................................................................................................TATGAATATGAACCAAAAGATC......................................................................................................2225.006.00---5.00-------------------------------------
..............................................................................................................................TATGAATATGAACCAAAAGAAA......................................................................................................2223.006.00-1.002.00--------------------------------------
..............................................................................................................................TATGAATATGAACCAAAAATC.......................................................................................................213.000.00---3.00-------------------------------------
..............................CACTAGAAGGACTAGGAGAGGGTG....................................................................................................................................................................................................243.000.00-------------3.00---------------------------
..............................................................................................................................TATGAATATGAACCAAA...........................................................................................................1732.332.33----1.33-0.670.33---------------------------------
................................................................................................................................................AATAACGTTGGATGATAAC.......................................................................................1912.002.00----------2.00------------------------------
................................CTAGAAGGACTAGGAGAG........................................................................................................................................................................................................1812.002.00----------------1.00--------1.00---------------
..................TTGTACTCAGAGCACTAGAAGGACTAGGAGA.........................................................................................................................................................................................................3111.001.00-----------1.00-----------------------------
...................TGTACTCAGAGCACTAGAAGG..................................................................................................................................................................................................................2111.001.00---------1.00-------------------------------
.................................................................CTCTTGTTTTACTTCTCAT......................................................................................................................................................................191.000.00------------------------------------1.00----
............................................................................................................................GGTATGAATATGAACTCTG...........................................................................................................191.000.00---------------------1.00-------------------
..............................................................................................................................TATGAATATGAACCAAAAAA........................................................................................................2011.001.00------1.00----------------------------------
.......................................................TTTCTTTTCTCTCTTGTTTTGGA............................................................................................................................................................................231.000.00---------------1.00-------------------------
...........................GAGCACTAGAAGGACTAGGAGAGGGTG....................................................................................................................................................................................................271.000.00----------1.00------------------------------
.................................TAGAAGGACTAGGAGAGGGTGT...................................................................................................................................................................................................221.000.00----------------------1.00------------------
.....................TACTCAGAGCACTAGAAGGACTAGGAGAGGGTG....................................................................................................................................................................................................331.000.00-----------------1.00-----------------------
............................................................TTTCTCTCTTGTTTTCG.............................................................................................................................................................................171.000.00----------------------------------1.00------
......................ACTCAGAGCACTAGAAGG..................................................................................................................................................................................................................1811.001.00----------------1.00------------------------
................CATTGTACTCAGAGCACTAGAAGT..................................................................................................................................................................................................................241.000.00-----------------------1.00-----------------
..................TTGTACTCAGAGCACTAGA.....................................................................................................................................................................................................................1911.001.00--------------------------1.00--------------
......................ACTCAGAGCACTAGAAGGAC................................................................................................................................................................................................................2011.001.00---------------------------------1.00-------
.....................................AGGACTAGGAGAGGTAATTTTC...............................................................................................................................................................................................2211.001.00--------------1.00--------------------------
.................................TAGAAGGACTAGGAGAGGGTG....................................................................................................................................................................................................211.000.00--------------1.00--------------------------
.......TGGACCACTCATTGTACTCAGAGCACTAGAAGG..................................................................................................................................................................................................................3311.001.00---------------------------1.00-------------
....................................AAGGACTAGGAGAGGAGCA...................................................................................................................................................................................................191.000.00-----------------------------------1.00-----
...............TCATTGTACTCAGAGCACTAGAAGGACTAGGAGA.........................................................................................................................................................................................................3411.001.00-----------1.00-----------------------------
.................................TAGAAGGACTAGGAGAGGGT.....................................................................................................................................................................................................201.000.00---------1.00-------------------------------
.........................CAGAGCACTAGAAGGACTAGGAGAGGGT.....................................................................................................................................................................................................281.000.00-----------------1.00-----------------------
......................................................TTTTCTTTTCTCTCTTGCCAG...............................................................................................................................................................................211.000.00-------------------1.00---------------------
..................TTGTACTCAGAGCACTAGAAGGAC................................................................................................................................................................................................................2411.001.00---------1.00-------------------------------
.........................CAGAGCACTAGAAGGACTAGGAGAGGAGC....................................................................................................................................................................................................291.000.00-----------1.00-----------------------------
...........................GAGCACTAGAAGGACTAGGAGAGGG......................................................................................................................................................................................................251.000.00---------1.00-------------------------------
.........................CAGAGCACTAGAAGGACTA..............................................................................................................................................................................................................1911.001.00----------1.00------------------------------
........................TCAGAGCACTAGAAGGACT...............................................................................................................................................................................................................1911.001.00-----------------------------1.00-----------
....................................AAGGACTAGGAGAGGGTGT...................................................................................................................................................................................................191.000.00--------------------1.00--------------------
.................ATTGTACTCAGAGCACTAGAAGGACTAGGAG..........................................................................................................................................................................................................3111.001.00--------------------------------1.00--------
........................TCAGAGCACTAGAAGGACTAGGAGAGGG......................................................................................................................................................................................................281.000.00------------------------1.00----------------
................CATTGTACTCAGAGCACTAGAAGGACT...............................................................................................................................................................................................................2711.001.00-------------------------------1.00---------
..............................................................................................................................TATGAATATGAACCAAAGGA........................................................................................................2030.332.33-0.33---------------------------------------
..................................AGAAGGACTAGGAGAGGGTGT...................................................................................................................................................................................................2140.250.25----------------------------------------0.25
..................................AGAAGGACTAGGAGAGG.......................................................................................................................................................................................................1740.250.25--------------------------------------0.25--

Antisense strand
TAGGAGTTGGACCACTCATTGTACTCAGAGCACTAGAAGGACTAGGAGAGGTAATTTTCTTTTCTCTCTTGTTTTACTTCTTACCGTGTGTCTCCTTCTCTTCTTCTTAAAGATGTCATTCTTTGGTATGAATATGAACCAAAAAATAACGTTGGATGATAACAGGGGTTTATTTTTTAGAGAAAGGACTAACTAGAAAATTACCTGAATAGATTTTGTTTGTGGTAAATGAGGTCTCTAGTAGGAGCAC
......................................................................((((...(((.(((((.(((......(((...........)))...)))....))))).)))...))))...............................................................................................................
............................................................61.......................................................................................150..................................................................................................
SizePerfect hitTotal NormPerfect NormSRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR029128(GSM416757)
H520. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR029130(GSM416759)
DLD2. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR343334SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
..............................................................................................................................TTTTGGTTCATATTCATA.......................................................................................................... 1823.003.00--0.50-1.00--0.50----1.00----------------------------
..............................................................................................................................TATGAATATGAACCAAAA.......................................................................................................... 1831.670.00--1.00---0.67----------------------------------
.....................................................................................................................................ATGAACCAAAAAATATTGA.................................................................................................. 191.000.00---------------1.00-------------------------
.................................................................................................................................................ATAACGTTGGATGATCTC....................................................................................... 181.000.00----------------------------1.00------------
..............................................................................................................................TATGAATATGAACCAAAAA......................................................................................................... 1921.000.00------1.00----------------------------------
..............................................................................................................................TTTGGTTCATATTCATA........................................................................................................... 1731.001.00------1.00----------------------------------
...................................................................................................................................................................................................................GATTTTGTTTGTGGTAAG..................... 181.000.00------------------1.00----------------------
..............................................................................................................................TATGAATATGAACCAAAATC........................................................................................................ 2030.670.00---0.67-------------------------------------
...............................................................................................CTTTAAGAAGAAGAGAA.......................................................................................................................................... 1740.250.25---------------------------------------0.25-