ID: uc011drk.1_intron_13_0_chr6_33633754_f.3p
GENE: (14)
chr6:33634706-33634955+


(1)
AGO1.ip 		(3)
AGO2.ip 		(2)
B-CELL 		(1)
BRAIN 		(4)
BREAST 		(9)
CELL-LINE 		(3)
CERVIX 		(3)
HELA 		(2)
LIVER 		(5)
OTHER 		(6)
SKIN 		(1)
UTERUS

Sense strand
GGGATTCCAACAAGGAGTAGGGAGAGCTGGGGCTGAGGATGGCTGGGCTGGGGTTGTGGTCCAGCTTAGAATCAGCTCGAAGCTGATGTCCGGGCTGGCTTTAGGGCAGAGTCAGTTGGGACTCAGGGATGACTCCTGGGATGACTTAGGGGTACAGACAGGTGTTGGGGAATCAGTCCTCACCCTCTGTATTCCCCCAGGTCTTTGGCATTCTGAAGGCCCCGTTCCGTGAGAAGGGGGGTGAAGGTCC
....................................................................................................................................................((((((((((..((.((.(((((.....)))))))))))))))...))))....................................................
.............................................................................................................................................142.......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189783SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189787SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR029124(GSM416753)
HeLa. (hela)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		TAX577740(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040039(GSM532924)
G531T. (cervix)		SRR040038(GSM532923)
G531N. (cervix)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR038857(GSM458540)
D20. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR038862(GSM458545)
MM472. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
..................................................................................................................................................TAGGGGTACAGACAGGTGTTGGGGAATCAG..........................................................................3017.007.003.004.00----------------------------------
..................................................................................................................................................TAGGGGTACAGACAGGTGTT....................................................................................2016.006.00-----2.00--------------1.00------1.001.00--1.00----
..................................................................................................................................................TAGGGGTACAGACAGGTGTTGGGG................................................................................2415.005.00--4.001.00--------------------------------
..................................................................................................................................................TAGGGGTACAGACAGGTGTTGGGGAATC............................................................................2813.003.00-3.00----------------------------------
.................................................................................................................................................TTAGGGGTACAGACAGGTGTTGG..................................................................................2312.002.00--------1.00----1.00----------------------
..................................................................................................................................................TAGGGGTACAGACAGGTGTTGG..................................................................................2212.002.00-----------------------1.00-----1.00------
..................................................................................................................................................................................CTCACCCTCTGTATTCCCCCAG..................................................2212.002.00-2.00----------------------------------
.................................................................................................................................................TTAGGGGTACAGACAGGTGTTGGGGA...............................................................................2612.002.002.00-----------------------------------
...........................................................................................GGGCTGGCTTTAGGGCGTCT...........................................................................................................................................202.000.00----2.00-------------------------------
..................................................................................................................................................TAGGGGTACAGACAGGTGTTGGG.................................................................................2312.002.00---1.00----------1.00---------------------
..................................................................................................................................................................................................................TTCTGAAGGCCCCGTTCCGTGA..................2211.001.00-------------------------1.00----------
..................................................................................................................................................TAGGGGTACAGACAGGTGTTGGAA................................................................................2411.002.00------------------1.00-----------------
..................................................................................................................................................TAGGGGTACAGACAGGTGTTGGGGAAT.............................................................................2711.001.001.00-----------------------------------
.................................................................................................................................................TTAGGGGTACAGACAGGTGTTGGGGAATC............................................................................2911.001.001.00-----------------------------------
.....................................................................................................................................................GGGTACAGACAGGTGTTGGGA................................................................................211.000.00------------1.00-----------------------
.................................................................................................................................................TTAGGGGTACAGACAGGTGTTG...................................................................................2211.001.001.00-----------------------------------
................................................................................................................................................................................TCCTCACCCTCTGTATTCCCCCTA..................................................241.000.00------1.00-----------------------------
..................................................................................................................................................TAGGGGTACAGACAGGTGTTGGGA................................................................................2411.002.00---1.00--------------------------------
.........................................................................................................................................................................................................TCTTTGGCATTCTGAAAAG..............................191.000.00------------------------------1.00-----
.................................................................................................................................................TTAGGGGTACAGACAGGTGTTGGGGAATCA...........................................................................3011.001.001.00-----------------------------------
......................................................................................................................................................................................................AGGTCTTTGGCATTCTGAAGG...............................2111.001.00-----------------1.00------------------
..................................................................................................................................................TAGGGGTACAGACAGGTGGGCG..................................................................................221.000.00------1.00-----------------------------
..................................................................................................................................................TAGGGGTACAGACAGGTGTTG...................................................................................2111.001.00---------1.00--------------------------
..........................................CTGGGCTGGGGTTGTATT..............................................................................................................................................................................................181.000.00-------------------1.00----------------
........................................................................................TCCGGGCTGGCTTTAG..................................................................................................................................................1621.001.000.50--------------------------------0.50--
.................................................................................................................................................TTAGGGGTACAGACAGGTGTTGGGGAATCAG..........................................................................3111.001.001.00-----------------------------------
............................................................................................................GAGTCAGTTGGGACTCAGGGATGACT....................................................................................................................2611.001.00-------1.00----------------------------
...............AGTAGGGAGAGCTGGGGA.........................................................................................................................................................................................................................181.000.00--------------------------------1.00---
...................................................................................................................................................................................TCACCCTCTGTATTCCCCCAGT.................................................221.000.00---------------1.00--------------------
........................................................................................................................................................................................................GTCTTTGGCATTCTGAACATC.............................211.000.00-------1.00----------------------------
............................................................................................................GAGTCAGTTGGGACTCAGGGATGA......................................................................................................................2411.001.00------------------------1.00-----------
...................................................................................................................................................................................................................TCTGAAGGCCCCGTTTTCG....................191.000.00----------1.00-------------------------
..................................................................................................................................................TAGGGGTACAGACAGGTGTTGGGGAATCA...........................................................................2911.001.001.00-----------------------------------
..................................................................................................................................................TAGGGGTACAGACAGGTGTTGGA.................................................................................2311.002.00-----------1.00------------------------
.................................................................................................................................................TTAGGGGTACAGACAGGTGTTGGG.................................................................................2411.001.001.00-----------------------------------
..................................................................................................................................................................................................................................CCGTGAGAAGGGGGG.........1520.500.50----------------------------------0.50-
........................................................................................TCCGGGCTGGCTTTAGACA...............................................................................................................................................1920.501.00-----------------------------------0.50
...................................................................................................................................................AGGGGTACAGACAGGTGT.....................................................................................1820.500.50----0.50-------------------------------
.........................................................................................CCGGGCTGGCTTTAG..................................................................................................................................................1540.250.25--------0.25---------------------------

Antisense strand
GGGATTCCAACAAGGAGTAGGGAGAGCTGGGGCTGAGGATGGCTGGGCTGGGGTTGTGGTCCAGCTTAGAATCAGCTCGAAGCTGATGTCCGGGCTGGCTTTAGGGCAGAGTCAGTTGGGACTCAGGGATGACTCCTGGGATGACTTAGGGGTACAGACAGGTGTTGGGGAATCAGTCCTCACCCTCTGTATTCCCCCAGGTCTTTGGCATTCTGAAGGCCCCGTTCCGTGAGAAGGGGGGTGAAGGTCC
....................................................................................................................................................((((((((((..((.((.(((((.....)))))))))))))))...))))....................................................
.............................................................................................................................................142.......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189783SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189787SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR029124(GSM416753)
HeLa. (hela)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		TAX577740(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040039(GSM532924)
G531T. (cervix)		SRR040038(GSM532923)
G531N. (cervix)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR038857(GSM458540)
D20. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR038862(GSM458545)
MM472. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
.....................................................................................................................................................GGGTACAGACAGGTGTTGGA................................................................................. 201.000.00----------------1.00-------------------
.................................................................................................................AGTTGGGACTCAGGGATGT...................................................................................................................... 191.000.00--------------------------1.00---------
.....................................................................AATCAGCTCGAAGCTGTC................................................................................................................................................................... 181.000.00---------------------1.00--------------
.................TAGGGAGAGCTGGGGAGC....................................................................................................................................................................................................................... 181.000.00----------------------1.00-------------