ID: uc011dmo.1_intron_12_0_chr6_30630799_r.3p
GENE: (7)
chr6:30630749-30630998-


(1)
B-CELL
(2)
BRAIN
(1)
BREAST
(8)
CELL-LINE
(2)
LIVER
(1)
OTHER

Sense strand
CCCAGAGCTGGGTGAGGACCCCCTTTGAGGGCCCTAGGTCTGTCATCCTATCTATTTGCCCTTCTTTTCTGGTTTTCAGCATCTGTCTTTTCCTCCTTTTCTCCTGCCTGGTTTTTACAACTTCTTTCTCTGAAATGTACCTGGTCCCAGGGTGCATATTTAGTAAAGGGCAAACTTCTTCTTTTTTCTTTGTCATTCAGGGTTATACAAACAAGGGTATGAAGATTGCCTGCACCCAACCCCGGAGAGT
.........................................................((((((.......((....(((...)))......)).........((.....))..................((((((((((((((....)))).))))).)))))..))))))...............................................................................
.........................................................58............................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
TAX577579(Rovira)
total RNA. (breast)
SRR189786SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
.............................................................................................................................................................................ACTTCTTCTTTTTTCTTTTTAG.......................................................22112.000.0035.0037.0022.0016.002.00----------
.............................................................................................................................................................................ACTTCTTCTTTTTTCTTTTCAG.......................................................223.000.003.00--------------
.............................................................................................................................................................................ACTTCTTCTTTTTTCTTTTTAT.......................................................223.000.00-1.001.001.00-----------
.............................................................................................................................................................................ACTTCTTCTTTTTTCTTTTTAA.......................................................222.000.002.00--------------
..............................................................TCTTTTCTGGTTTTCCAC..........................................................................................................................................................................181.000.00------1.00--------
............................................................................................................................................................................AACTTCTTCTTTTTTCTTG...........................................................1951.000.201.00--------------
................................................................................................................................................................................TCTTCTTTTTTCTTTGTCGTG.....................................................211.000.00----1.00----------
..............................................................................................................................................................................CTTCTTCTTTTTTCTAATG.........................................................191.000.001.00--------------
..............................................................................................................................................................................CTTCTTCTTTTTTCTATTG.........................................................191.000.001.00--------------
.............................................................................................................................................................................ACTTCTTCTTTTTTCTTTGCC........................................................211.000.00----1.00----------
.............................................................................................................................................................................ACTTCTTCTTTTTTCTTTTAAG.......................................................221.000.00----1.00----------
.............................................................................................................................................................................ACTTCTTCTTTTTTCTTTTTCG.......................................................221.000.00-1.00-------------
.............................................................................................................................................................................ACTTCTTCTTTTTTCTTTTAG........................................................211.000.001.00--------------
.............................................................................................................................................................................ACTTCTTCTTTTTTCTTTGTAG.......................................................221.000.00----1.00----------
......................................................................................................................................................................................................................................TGCACCCAACCCCGGGGG..181.000.00---------1.00-----
........................................................................................................................................................................................................................GTATGAAGATTGCCTGCA................1811.001.00--------1.00------
................................................................................................................................................................................TCTTCTTTTTTCTTTGGATC......................................................201.000.00----------1.00----
..............................................................................................................................................................................CTTCTTCTTTTTTCTTTGC.........................................................191.000.00----1.00----------
.............................................................................................................................................................................ACTTCTTCTTTTTTCTTTAG.........................................................201.000.00--1.00------------
.................................................................................................................................................................................................................AACAAGGGTATGAAGATTG......................1920.500.50------------0.50--
............................................................................................................................................................................AACTTCTTCTTTTTTCTT............................................................1850.200.20------0.20--------
.CCAGAGCTGGGTGAGG.........................................................................................................................................................................................................................................1690.110.11--------------0.11

Antisense strand
CCCAGAGCTGGGTGAGGACCCCCTTTGAGGGCCCTAGGTCTGTCATCCTATCTATTTGCCCTTCTTTTCTGGTTTTCAGCATCTGTCTTTTCCTCCTTTTCTCCTGCCTGGTTTTTACAACTTCTTTCTCTGAAATGTACCTGGTCCCAGGGTGCATATTTAGTAAAGGGCAAACTTCTTCTTTTTTCTTTGTCATTCAGGGTTATACAAACAAGGGTATGAAGATTGCCTGCACCCAACCCCGGAGAGT
.........................................................((((((.......((....(((...)))......)).........((.....))..................((((((((((((((....)))).))))).)))))..))))))...............................................................................
.........................................................58............................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
TAX577579(Rovira)
total RNA. (breast)
SRR189786SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
.....................TAGGGCCCTCAAAGG...................................................................................................................................................................................................................... 1522.002.00-----2.00---------
...................................................................................TGTCTTTTCCTCCTTTAGCA................................................................................................................................................... 201.000.00-------1.00-------
...................................................................................TGTCTTTTCCTCCTTAGCA.................................................................................................................................................... 191.000.00-----------1.00---
................................................................................AGGAGGAAAAGACAGAT......................................................................................................................................................... 1770.140.14-------------0.14-