| (2) B-CELL | (13) CELL-LINE | (1) FIBROBLAST | (1) HEART | (2) HELA | (2) OTHER | (6) SKIN | (1) TESTES | (1) UTERUS | (1) XRN.ip |
| TTTTACTTGCAGGGTTATCGAGCTTTCATGAATGATCCTGCCATGAATCGGTAAGTTCTTTCCTTGATTATATCTAGAAATGTAAATACTATAGATAACTTGAGGAAGTAATGATGAATTTCTTTGGCTGATGAATTTTAGAAGAAATGGAATTGGAGAGGTTTTTTTTGAATGGTTGCAACATTTGGGTTAAAATACTATGAAAAAATACATTTCCATGTTAAAGATGTATTTGTATTGTATGTATTAA ................................................................................................................(((..(((((((...((((......)))))))))))...)))................................................................................................ .........................................................................................................106.....................................................162...................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR390723(GSM850202) total small RNA. (cell line) | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line) | SRR037938(GSM510476) 293Red. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | SRR189782 | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR189787 | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR363675(GSM830252) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | SRR038859(GSM458542) MM386. (cell line) | SRR029126(GSM416755) 143B. (cell line) | SRR553576(SRX182782) source: Testis. (testes) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | SRR060981(GSM569185) Human centroblast [09-001]. (cell line) | SRR033729(GSM497074) splenic MZL (Splenic414). (B cell) | SRR330897(SRX091735) tissue: skin psoriatic uninvolveddisease stat. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................AGTAATGATGAATTTCTTTGGCTGATG..................................................................................................................... | 27 | 1 | 22.00 | 22.00 | - | - | - | 5.00 | 4.00 | 3.00 | - | 3.00 | - | 2.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - |
| ............................................................................................................................................GAAGAAATGGAATTGA.............................................................................................. | 16 | 0 | 14.00 | 2.00 | 14.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................AAGTAATGATGAATTTCTTTGGCTGATG..................................................................................................................... | 28 | 1 | 9.00 | 9.00 | - | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................GAAGAAATGGAATTGATC............................................................................................ | 18 | 0 | 5.00 | 2.00 | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................TTGGAGAGGTTTTTTTTGAATGGCCG........................................................................ | 26 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................GAAGAAATGGAATTG............................................................................................... | 15 | 0 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TAGAAGAAATGGAATTGGAGAGG......................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................AGTAATGATGAATTTCTTTGGCTGATGAATTTT............................................................................................................... | 33 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGGAGAGGTTTTTTTTTGAG............................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................ATGATGAATTTCTTTGGCTGATG..................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................TGAATGATCCTGCCATGAATCGGGGC.................................................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .........................................................................................................AAGTAATGATGAATTTCTTTGGCTGAGG..................................................................................................................... | 28 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................TCGAGCTTTCATGAATGATCCA................................................................................................................................................................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| ..........................................................................................................AGTAATGATGAATTTCATAT............................................................................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................ATGGAATTGGAGAGGTTTTTTTTGAAAA............................................................................ | 28 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ..............................AATGATCCTGCCATGAATCGGGG..................................................................................................................................................................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................GATCCTGCCATGAATCG........................................................................................................................................................................................................ | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................AATGATGAATTTCTTTGGCTGATG..................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................TTGGCTGATGAATTTGAGA............................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ..............TTATCGAGCTTTCATGAA.......................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TGAGGAAGTAATGATGAAT................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................................................GTAATGATGAATTTCTTTGGCTG........................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............GTTATCGAGCTTTCATGAAT......................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .TTTACTTGCAGGGTTATCGAGC................................................................................................................................................................................................................................... | 22 | 3 | 0.67 | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.67 | - |
| ...................................................................................................................................................................................................................................TGTATTTGTATTGTATG...... | 17 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 |
| TTTTACTTGCAGGGTTATCGAGCTTTCATGAATGATCCTGCCATGAATCGGTAAGTTCTTTCCTTGATTATATCTAGAAATGTAAATACTATAGATAACTTGAGGAAGTAATGATGAATTTCTTTGGCTGATGAATTTTAGAAGAAATGGAATTGGAGAGGTTTTTTTTGAATGGTTGCAACATTTGGGTTAAAATACTATGAAAAAATACATTTCCATGTTAAAGATGTATTTGTATTGTATGTATTAA ................................................................................................................(((..(((((((...((((......)))))))))))...)))................................................................................................ .........................................................................................................106.....................................................162...................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR390723(GSM850202) total small RNA. (cell line) | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line) | SRR037938(GSM510476) 293Red. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | SRR189782 | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR189787 | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR363675(GSM830252) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | SRR038859(GSM458542) MM386. (cell line) | SRR029126(GSM416755) 143B. (cell line) | SRR553576(SRX182782) source: Testis. (testes) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | SRR060981(GSM569185) Human centroblast [09-001]. (cell line) | SRR033729(GSM497074) splenic MZL (Splenic414). (B cell) | SRR330897(SRX091735) tissue: skin psoriatic uninvolveddisease stat. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................AATGATCCTGCCATGTCGG......................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................TATATCTAGAAATGTATAG................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................ATCTAGAAATGTAAACGAA................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................AGTTCTTTCCTTGATCTG................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |