ID: uc011ckh.1_intron_5_0_chr4_175443219_r.5p
GENE: HPGD(1)
chr4:175443575-175443824-


(3)
B-CELL
(1)
BRAIN
(15)
BREAST
(15)
CELL-LINE
(6)
CERVIX
(9)
HEART
(1)
HELA
(5)
LIVER
(2)
OTHER
(74)
SKIN

Sense strand
CGGAAGGCAAAGATCGCGAAGCTTGGCGCTCCAGAACGCTCAGGGGGCAGGTGACACAGTCGTGGGTTCCCCGGCGGGCGCTGGCTTGACAGTTTCCTCCCCGCCCACTGGCAGGGGAGCGCCCCGCCGGGCTGCACGCGCGCGCGCGCAGGGGGGCATAAAAGCCGCGGCCGCGCGGAGACGCGGAGCTCGCCCACCGCCCGCCCCAGCAGTGGCTGCACCATGCACGTGAACGGCAAAGTGGCGCTGG
.........................................................................................................................(((....)))((((.(((....))).)))).(((((.........(((((..((((....))))..)).))).........)))))...........................................
.........................................................................................................................122.....................................................................................210......................................
SizePerfect hitTotal NormPerfect NormSRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
TAX577742(Rovira)
total RNA. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR040028(GSM532913)
G026N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR189782SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR040007(GSM532892)
G601T. (cervix)
SRR038861(GSM458544)
MM466. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR040012(GSM532897)
G648N. (cervix)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
TAX577588(Rovira)
total RNA. (breast)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR189785SRR040014(GSM532899)
G623N. (cervix)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
................................................................................................................................GGGCTGCACGCGCGC...........................................................................................................153142.00142.001.33-1.004.678.675.330.673.678.335.672.332.67-4.002.00-2.331.671.33-1.674.000.67-0.673.331.334.00--5.00-2.671.331.671.671.67-2.001.672.33-1.330.333.001.33-1.672.673.671.670.33-1.331.331.671.002.00--2.671.330.67-0.67--1.00-1.000.671.671.671.67---1.33-1.330.331.33-1.000.67-0.33---0.67-0.67------------1.00--1.00--0.670.670.670.670.330.33-------0.330.330.33-0.33----
..............................................................................................................................CCGGGCTGCACGCGCGC...........................................................................................................17170.0070.0018.00--3.001.004.008.00---1.00--1.001.00-2.001.001.00-2.00-1.00---1.00------2.00-1.00-3.00--1.002.00--------1.002.002.00-1.00------1.001.001.00-1.001.00-----------1.00---1.00----------------1.00----1.00-1.00--------------------------
...............................................................................................................................CGGGCTGCACGCGCGC...........................................................................................................16138.0038.004.00---1.001.00-5.00-1.001.002.00-1.002.00---1.001.00-2.001.00----------1.001.001.00--1.00-1.00--1.00--3.00------2.00-1.001.00----------1.00-------------------1.00---------------------------------------------
.........................................................................................................................................................................................GAGCTCGCCCACCGCCCGCCC............................................21113.0013.00---4.00---1.00--------------1.00--1.00--------1.001.00---1.00----1.00--------------------1.001.00------------------------------------------------------------------
...............................................................................................................................CGGGCTGCACGCGCGCTAC........................................................................................................19112.0038.00---2.00---------------4.00---1.00--1.00----1.00--1.00------------1.00--------------------------------1.00----------------------------------------------------
..............................................................................................................................CCGGGCTGCACGCGC.............................................................................................................1547.257.250.50--0.50-----0.250.500.75----0.250.250.25-0.250.25--0.50--------0.25----0.500.25-------0.25--0.25--------------0.25----0.25------------0.250.25------------------------------0.25-------------0.25---
.........................................................................................................................................................................................GAGCTCGCCCACCGCCCGC..............................................1917.007.00-----------1.00-1.00--1.00-------1.001.00-------------------------------1.00-------------------------------------------------1.00-------------------------
..............................................................................................................................CCGGGCTGCACGCGCGCTAC........................................................................................................2016.0070.00----1.00-----------1.001.00-----1.00-------1.00----1.00------------------------------------------------------------------------------------------------
.....................................................................CCCGGCGGGCGCTGGCGC...................................................................................................................................................................1835.671.67-----0.33-----0.33-----0.33--0.33-----------0.33------------0.33----0.33--------0.33-0.330.33---------------0.33-----0.33-----0.33-0.33-----------------0.33----------0.33-0.33---------
...............................................................................................................................CGGGCTGCACGCGCGCT..........................................................................................................1715.0038.00-----------------1.00-1.00----------------------2.00-------------1.00----------------------------------------------------------------------------
.........................................................................................................................................................................................GAGCTCGCCCACCGCCCGCC.............................................2015.005.00----------1.001.00--1.00---------1.00---------------------------------------1.00--------------------------------------------------------------------
...............................................................................................................................CGGGCTGCACGCGCGCTACA.......................................................................................................2015.0038.00----------1.00--------1.00---------------------------------------1.00-------------------------------1.00-1.00---------------------------------------
..............................................................................................................................CCGGGCTGCACGCGCGCTACA.......................................................................................................2115.0070.00------2.00------------------------1.00----1.00---------------------------------1.00--------------------------------------------------------------
..............................................................................................................................CCGGGCTGCACGCGCGCT..........................................................................................................1814.0070.00----1.00-1.00----------------1.00-----1.00-------------------------------------------------------------------------------------------------------
..............................................................................................................................CCGGGCTGCACGCGCG............................................................................................................1633.333.330.33-------0.330.33-0.33-0.67--0.33----------------0.33--------------------0.330.33-----------------------------------------------------------------------------
...............................................................................................................................CGGGCTGCACGCGCG............................................................................................................1533.333.330.33--0.330.33--------0.33--0.33-------0.33-0.33-----------------------0.33-----------0.33------------------------------------------------------0.33---------------
.........................................................................................................................................................................................GAGCTCGCCCACCGCCC................................................1713.003.00--------1.00-----------1.00------------------------------1.00---------------------------------------------------------------------------------
.........................................................................................................................................................................................GAGCTCGCCCACCGCCCGCCCC...........................................2213.003.00-------1.00----------1.00-----1.00------------------------------------------------------------------------------------------------------------
......................................................................CCGGCGGGCGCTGGCGC...................................................................................................................................................................1752.601.00----0.20--0.20---------0.400.20-------------0.20--0.200.20---------------------------0.40-----------0.20---------0.20-----------------------------0.20----------------
.....................................................................CCCGGCGGGCGCTGGCGCGC.................................................................................................................................................................2032.331.67-------0.33-0.33-------0.330.33------------------------0.33-------------------------------0.33------0.33--------------------------------------------------
.....................................................................CCCGGCGGGCGCTGGCG....................................................................................................................................................................1732.331.67-----0.67-----0.33----0.330.33----------------------------------0.33---------------------------------------------------------0.33----------------------
...............................................................................................................................CGGGCTGCACGCGCGCTA.........................................................................................................1812.0038.00-----------------------1.00---------------------------------------------------1.00---------------------------------------------------------
..................................................................................................................................................................................................................................ACGTGAACGGCAAAGTGGCG....2012.002.00----------------------------------------------------1.00-----1.00--------------------------------------------------------------------------
.........................................................................................................................................................................................GAGCTCGCCCACCGCCCGCCCCAGCAG......................................2712.002.00----2.00--------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCGGGCTGCACGCGCGCTA.........................................................................................................1912.0070.00-----------1.00-----------1.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................GAGCTCGCCCACCGCCCGCCCCAGC........................................2512.002.00---1.00-----1.00---------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................GAGCTCGCCCACCGCCCGCCCCA..........................................2312.002.00----------------------1.00---------1.00----------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................ATGCACGTGAACGGCAAAGTG.......2112.002.00----------------------------------------------------------2.00--------------------------------------------------------------------------
.....................................................................CCCGGCGGGCGCTGGC.....................................................................................................................................................................1631.671.67----0.33----------------------------------0.33------------------------------------------------1.00--------------------------------------------
.........................................................................................................................................................................................GAGCTCGCCCACCGCC.................................................1621.501.50---------0.50----0.50---0.50------------------------------------------------------------------------------------------------------------------
......................................................................CCGGCGGGCGCTGGCGCGC.................................................................................................................................................................1951.401.000.20----------------0.200.20-----------------0.20------0.40--------------------------------------------------------------------------------------0.20--
.....................................................................CCCGGCGGGCGCTGGCGCG..................................................................................................................................................................1931.331.67------------------0.33---0.33----------------------0.33--------------------------------------------------------------------------0.33------------
......................................................................CCGGCGGGCGCTGGCGCG..................................................................................................................................................................1851.201.00---0.20----0.20-----------------------0.20---0.20--------------------------------------0.200.20--------------------------------------------------------
............................................................................................................................................................................................CTCGCCCACCGCCCGCCCCAGC........................................2211.001.00--------------------1.00----------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................CCGCCCCAGCAGTGGCTGCA..............................2011.001.00----------------------1.00--------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCGGGCTGCACGCGCGCCATG.......................................................................................................2111.0070.00--------------------------------------------------------------------------------------------------1.00----------------------------------
..............................................................................................................................CCGGGCTGCACGCGCGCAA.........................................................................................................1911.0070.00-------------------------------------1.00-----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................CGCCCACCGCCCGCCCCAGCA.......................................2111.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................GCGCCCCGCCGGGCTGGGG.................................................................................................................191.000.00----------------------------------------------1.00--------------------------------------------------------------------------------------
.........................................................................................................................................................................................GAGCTCGCCCACCGCCCCC..............................................1911.003.00------------------1.00------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CGCCCCGCCGGGCTGCACGCGCGCGCGCGCCGGG.................................................................................................341.000.00-----------------------------1.00-------------------------------------------------------------------------------------------------------
......................................................................CCGGCGGGCGCTGGC.....................................................................................................................................................................1551.001.00---0.20--------------0.20-------------0.20------0.20--------------------------------------------------------------------------------------------0.20
.......................................................................................................................................................................................................CCCGCCCCAGCAGTGGCTGC...............................2011.001.00------------------------1.00------------------------------------------------------------------------------------------------------------
.......................................................................................................................CGCCCCGCCGGGCTGCCG.................................................................................................................181.000.00------------------------------------------------------------------------------------------------------1.00------------------------------
.................................................................................................................................................................................................................CAGTGGCTGCACCATCAAT......................191.000.00--------------------------------------------------------------------1.00----------------------------------------------------------------
............................................................................................................................CGCCGGGCTGCACGCGCGCGCGCGCAGGGGGGC.............................................................................................3311.001.00-----------------------------------------1.00-------------------------------------------------------------------------------------------
........................................................................................................................................................................................GGAGCTCGCCCACCGCCCGC..............................................2011.001.00-----------------------------------------------------------------------------------------1.00-------------------------------------------
.....................................................................................................................................................................................................................................TGAACGGCAAAGTGGC.....1611.001.00--------------1.00----------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................GTGAACGGCAAAGTGGCG....1811.001.00-----------------------------1.00-------------------------------------------------------------------------------------------------------
....AGGCAAAGATCGCGAAGCTTGGCGCT............................................................................................................................................................................................................................2611.001.00-------------------------------------------------------------------------------------------------------1.00-----------------------------
..............................................................................................................................CCGGGCTGCACGCGCGCGAC........................................................................................................201.000.00-------------------------------1.00-----------------------------------------------------------------------------------------------------
................................................................................................................................................................................................CCCACCGCCCGCCCCAGCAGTGGC..................................2411.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................CGCCCGCCCCAGCAGTGGCTGC...............................2211.001.00------------------------------------------------1.00------------------------------------------------------------------------------------
........................................................................................................................GCCCCGCCGGGCTGCACGCGCGCG..........................................................................................................2411.001.00-----------------------------1.00-------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................GCAGTGGCTGCACCATGC........................1811.001.00------------------------------------------1.00------------------------------------------------------------------------------------------
...............................................................GGGTTCCCCGGCGGGGCG.........................................................................................................................................................................181.000.00------------------------------------------------------------------------------------------------1.00------------------------------------
....................................................................CCCCGGCGGGCGCTGGCTTGAC................................................................................................................................................................2211.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................GAGCTCGCCCACCGCCCGCCCCAGCA.......................................2611.001.00-------------1.00-----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................AGCTCGCCCACCGCCCGC..............................................1811.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................GAGCTCGCCCACCGCCCGCCCCAG.........................................2411.001.00--------------------------1.00----------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................GAGCTCGCCCACCGCCCGCCCCAGCAGTGG...................................3011.001.00---------------------------------------------1.00---------------------------------------------------------------------------------------
...............................................................................................................................................................................................................AGCAGTGGCTGCACCATGCA.......................2011.001.00--------------------------------------------------------------------------1.00----------------------------------------------------------
...........................................................................................................................................................................CGCGCGGAGACGCGGAGCTCGCCCACCGC..................................................2911.001.00---------------------------------------------1.00---------------------------------------------------------------------------------------
...............................................................................................................................CGGGCTGCACGCGCGCGCTACT.....................................................................................................221.000.00-----------------------------1.00-------------------------------------------------------------------------------------------------------
..................AAGCTTGGCGCTCCAGAAC.....................................................................................................................................................................................................................1911.001.00---------------------------------------1.00---------------------------------------------------------------------------------------------
..............................................................................................................................CCGGGCTGCACGCGCAATC.........................................................................................................1941.007.25----------------------------------------------------------------------------------------------------1.00--------------------------------
........................................................................................................................................CGCGCGCGCGCGCAGCCC................................................................................................181.000.00---------------------------------------------------------------1.00---------------------------------------------------------------------
.........................................................................................................................................................................................GAGCTCGCCCACCGC..................................................1521.001.00--------------0.50---------------------0.50------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................CGCCCGCCCCAGCAGTGGCTGCACCATG.........................2811.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................AGCCGCGGCCGCGCGGAGACGCG.................................................................2311.001.00---------------------------1.00---------------------------------------------------------------------------------------------------------
................................................................................................................................GGGCTGCACGCGCGCGACA.......................................................................................................191.000.00-------------------------------1.00-----------------------------------------------------------------------------------------------------
.............................................................................................................................GCCGGGCTGCACGCGC.............................................................................................................1611.001.00---------------------------------------------------------------------1.00---------------------------------------------------------------
..............................................................................................................................................................................GCGGAGACGCGGAGCTGG..........................................................181.000.00----------------------------------------------------------------------------1.00--------------------------------------------------------
...................................................................................................................GGAGCGCCCCGCCGGGGGCG...................................................................................................................201.000.00--------------------------------------1.00----------------------------------------------------------------------------------------------
.....................................................................CCCGGCGGGCGCTGG......................................................................................................................................................................1571.001.00-----------0.14--0.14----------------------------------------0.14----0.14-----0.14-------------------0.140.14---------------------------------------------
......................................................................CCGGCGGGCGCTGGCG....................................................................................................................................................................1650.801.00-----------------0.20----------------0.20-----------------------------0.20---------------------------------------------0.20----------------------
..............................................................................................................................CCGGGCTGCACGCGCGA...........................................................................................................1730.673.33-----0.33-----------------------------------0.33-------------------------------------------------------------------------------------------
................................................................................................................................GGGCTGCACGCGCGCTATA.......................................................................................................1930.67142.00--------------------------------------------------------------------------0.33-----------------------------------------------0.33----------
........................................................................................................................................................................................................CCGCCCCAGCAGTGGC..................................1620.500.50--------------------------0.50----------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................CCCACCGCCCGCCCCAGC........................................1820.500.50--------------------------------------------------------------------------------------0.50----------------------------------------------
................................................................................................................................GGGCTGCACGCGCGCAA.........................................................................................................1730.33142.00-------------------------------------0.33-----------------------------------------------------------------------------------------------
................................................................................................................................GGGCTGCACGCGCGCTATC.......................................................................................................1930.33142.00--------------------------------------------------------------------------0.33----------------------------------------------------------
.....................................................................CCCGGCGGGCGCTGGCGCGG.................................................................................................................................................................2030.331.67-----------------------------------------------------------------------------------------------------------------------0.33-------------
................................................................................................................................GGGCTGCACGCGCGCCGGG.......................................................................................................1930.33142.00--------0.33----------------------------------------------------------------------------------------------------------------------------
.....................................................................CCCGGCGGGCGCTGGCGCGT.................................................................................................................................................................2030.331.67-------------------------------------0.33-----------------------------------------------------------------------------------------------
................................................................................................................................GGGCTGCACGCGCGCTG.........................................................................................................1730.33142.00-------------------------------------------------------------------------------------------------------------------------------0.33-----
................................................................................................................................GGGCTGCACGCGCGCCA.........................................................................................................1730.33142.00---------------------------------------------------------------0.33---------------------------------------------------------------------
................................................................................................................................GGGCTGCACGCGCGCTACC.......................................................................................................1930.33142.00----------------------------------------------------------------------------------------------------------------------0.33--------------
................................................................................................................................GGGCTGCACGCGCGCTAA........................................................................................................1830.33142.00-----------------------0.33-------------------------------------------------------------------------------------------------------------
................................................................................................................................GGGCTGCACGCGCGCTAT........................................................................................................1830.33142.00-----------------------0.33-------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCGGGCTGCACGCGCCCT..........................................................................................................1840.257.25-------------------------------------------------------------------------------------0.25-----------------------------------------------
..............................................................................................................................CCGGGCTGCACGCGCT............................................................................................................1640.257.25----------------0.25--------------------------------------------------------------------------------------------------------------------

Antisense strand
CGGAAGGCAAAGATCGCGAAGCTTGGCGCTCCAGAACGCTCAGGGGGCAGGTGACACAGTCGTGGGTTCCCCGGCGGGCGCTGGCTTGACAGTTTCCTCCCCGCCCACTGGCAGGGGAGCGCCCCGCCGGGCTGCACGCGCGCGCGCGCAGGGGGGCATAAAAGCCGCGGCCGCGCGGAGACGCGGAGCTCGCCCACCGCCCGCCCCAGCAGTGGCTGCACCATGCACGTGAACGGCAAAGTGGCGCTGG
.........................................................................................................................(((....)))((((.(((....))).)))).(((((.........(((((..((((....))))..)).))).........)))))...........................................
.........................................................................................................................122.....................................................................................210......................................
SizePerfect hitTotal NormPerfect NormSRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
TAX577742(Rovira)
total RNA. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR040028(GSM532913)
G026N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR189782SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR040007(GSM532892)
G601T. (cervix)
SRR038861(GSM458544)
MM466. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR040012(GSM532897)
G648N. (cervix)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
TAX577588(Rovira)
total RNA. (breast)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR189785SRR040014(GSM532899)
G623N. (cervix)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
......................................................................................................................................GCGCGCGCGCGCGTG..................................................................................................... 15053.0053.00-16.0015.00---------9.00--8.00------------5.00--------------------------------------------------------------------------------------------------------
...........................................CACGACTGTGTCACCTGCCCC.......................................................................................................................................................................................... 2111.001.00-------------------------------------------1.00-----------------------------------------------------------------------------------------
.....................................................................................................................................GCACGCGCGCGCGCGCGCC.................................................................................................. 191.000.00----------------------------------------------------------------------------------------------1.00--------------------------------------
................................................GGGGAACCCACGACTGTGTCACCT.................................................................................................................................................................................. 2411.001.00-------------------------------------------------------------------------------------1.00-----------------------------------------------
...............................................................................................................................................................................................GCCCACCGCCCGCCCTG.......................................... 171.000.00-----------------------------------------1.00-------------------------------------------------------------------------------------------
........................................................CCGCCGGGGAACCCACGACTG............................................................................................................................................................................. 2111.001.00-------------------------------------------------------------------------------------------------1.00-----------------------------------
..................................GTGTCACCTGCCCCCTGAGCGTT................................................................................................................................................................................................. 2311.001.00--------------------------------------------------------------------1.00----------------------------------------------------------------
.....................................................................................................................................GCACGCGCGCGCGCGCTGT.................................................................................................. 191.000.00-----------------------------------------------------------------------------------------------1.00-------------------------------------
....................GTTCTGGAGCGCCAAGC..................................................................................................................................................................................................................... 1711.001.00-----------------------------------------------1.00-------------------------------------------------------------------------------------
....................................................................CCCCGGCGGGCGCTGGCCT................................................................................................................................................................... 191.000.00-------------------------------------------------------------------------------------------------------------1.00-----------------------
......................................................................................................................................CACGCGCGCGCGCGCAGTGG................................................................................................ 201.000.00-------------------------------------------1.00-----------------------------------------------------------------------------------------
..............................................................................................TCCTCCCCGCCCACTGCA.......................................................................................................................................... 181.000.00-----------------------------------------------------------1.00-------------------------------------------------------------------------
.....................................................................................................................................GCACGCGCGCGCGCGCCCA.................................................................................................. 191.000.00-----------------1.00-------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCGGGCTGCACGCGCGACA......................................................................................................... 1931.000.00-----------------------------------------------------------------------------------------------------1.00-------------------------------
..GCGATCTTTGCCTTC......................................................................................................................................................................................................................................... 1520.500.50-----------------------------------------------------------0.50-------------------------------------------------------------------------
............................CTGAGCGTTCTGGAG............................................................................................................................................................................................................... 1520.500.50------------------------------------------------------0.50------------------------------------------------------------------------------
..............................................................................................................................................................................................GGGGCGGGCGGTGGGCG........................................... 1730.330.33--------------------------------0.33----------------------------------------------------------------------------------------------------
..................................................................................................................................................................CCGCGCGGCCGCGGCT........................................................................ 1650.200.20-----------------------------------------------------------------------------------------------------------------------------------0.20-