ID: uc011chs.1_intron_1_0_chr4_144920603_r.3p
GENE: GYPB(3)
chr4:144920553-144920802-


(1)
BREAST
(4)
CELL-LINE
(6)
OTHER
(20)
SKIN

Sense strand
AAAAGTAGATACTGAAATTACTAATGGTAAGACTGACACATTACCTCATAAATGTTACTAGCTAGATGTTGAAAGTTGACCAACAACTCTCAAAATATGATTAAGAAAAGGAAACCCGCAGAACAGTTTGATTCCAAAATGATTTTTTTCTTTGCACATGTCTTTCTTATTTGGACTTACATTGAAATTTTGCTTTATAGGAGAAACGGGACAACTTGTCCATCGTTTCACTGTACCAGGTATGTTAATA
......................................................................((.(((((.....))))).))...(((((...(((((((((....))......((.((((....)))).))....)))))))....))))).........................................................................................
......................................................................71...........................................................................................164....................................................................................
SizePerfect hitTotal NormPerfect NormSRR343335SRR343334SRR189784SRR189785SRR343337SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR189782SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................................................................................................ATTTTTTTCTTTGCACCCC..........................................................................................1938.000.0020.0015.001.00-2.00--------------------------
.............................................................................................................................................ATTTTTTTCTTTGCACCAG..........................................................................................1925.000.002.001.0015.007.00---------------------------
.............................................................................................................................................ATTTTTTTCTTTGCACCCCA.........................................................................................2022.000.0012.007.001.00-2.00--------------------------
.............................................................................................................................................ATTTTTTTCTTTGCACCAT..........................................................................................192.000.00--1.001.00---------------------------
...........................................................................TTGACCAACAACTCTGGC.............................................................................................................................................................181.000.00-------1.00-----------------------
.............................................................................................................................................ATTTTTTTCTTTGCACCCAT.........................................................................................201.000.00--1.00----------------------------
..............................................................................................................................................TTTTTTTCTTTGCACAGGGC........................................................................................201.000.00---------1.00---------------------
......AGATACTGAAATTACTTTGG................................................................................................................................................................................................................................201.000.00------1.00------------------------
....................................................................................................................CGCAGAACAGTTTGATACTT..................................................................................................................201.000.00---1.00---------------------------
..............................................................................................................................................TTTTTTTCTTTGCACTCCG.........................................................................................191.000.00--1.00----------------------------
...........................................................................................................AAGGAAACCCGCAGAACAGTTTGATTCC...................................................................................................................2811.001.00-----1.00-------------------------
....................................................................................................................................................................................................................AACTTGTCCATCGTTTCACT..................2011.001.00-----1.00-------------------------
..............................................................................................................................................TTTTTTTCTTTGCACTTCG.........................................................................................191.000.00---1.00---------------------------
..............................................................................................................................................TTTTTTTCTTTGCACATATA........................................................................................201.000.00--1.00----------------------------
.......................................................TACTAGCTAGATGTTGAAAGTT.............................................................................................................................................................................2230.330.33-----0.33-------------------------
...................................................................................................................................TTCCAAAATGATTTTTTTC....................................................................................................1950.200.20------------------0.20------------
...............................................................................................................................................TTTTTTCTTTGCACATG..........................................................................................1760.170.17---0.17---------------------------

Antisense strand
AAAAGTAGATACTGAAATTACTAATGGTAAGACTGACACATTACCTCATAAATGTTACTAGCTAGATGTTGAAAGTTGACCAACAACTCTCAAAATATGATTAAGAAAAGGAAACCCGCAGAACAGTTTGATTCCAAAATGATTTTTTTCTTTGCACATGTCTTTCTTATTTGGACTTACATTGAAATTTTGCTTTATAGGAGAAACGGGACAACTTGTCCATCGTTTCACTGTACCAGGTATGTTAATA
......................................................................((.(((((.....))))).))...(((((...(((((((((....))......((.((((....)))).))....)))))))....))))).........................................................................................
......................................................................71...........................................................................................164....................................................................................
SizePerfect hitTotal NormPerfect NormSRR343335SRR343334SRR189784SRR189785SRR343337SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR189782SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
................................................................................................................................................................................................................................GTTTCACTGTACCAGTGC........ 181.860.00-------0.140.14---0.290.140.290.29-0.14---0.14--0.14--0.14---
................................................................................................................................................................................................................................GTTTCACTGTACCAGTG......... 171.570.00-------0.290.14-0.43-0.14------0.14--0.140.14----0.14--
................................................................................................................................................................................................................................CTGGTACAGTGAAAC........... 1571.141.14-----------0.43-0.14------0.14----0.140.14---0.14
................ATTACTAATGGTAAGAATG....................................................................................................................................................................................................................... 191.000.00------1.00------------------------
.................................................................................................TGATTAAGAAAAGGACCA....................................................................................................................................... 181.000.00---1.00---------------------------
..................................................................................................................................................................................................................................TTCACTGTACCAGGTACTGC.... 201.000.00--------1.00----------------------
................................................................................................................................................................................................................................GTTTCACTGTACCAGTGCG....... 190.860.00----------0.29-----0.290.14-----------0.14-