ID: uc011ccd.1_intron_7_0_chr4_78678106_r.5p
GENE: (4)
chr4:78694035-78694284-


(1)
AGO2.ip 		(2)
B-CELL 		(2)
BREAST 		(9)
CELL-LINE 		(1)
CERVIX 		(2)
HEART 		(5)
LIVER 		(3)
OTHER 		(8)
SKIN

Sense strand
GCCTTATGAACTTGGTCGGCTCTTCCAGCTACAAACTCTAGGTTTGAAAGGTAAGTGATTTTTAAACAGTTTTGAGGTATTCTGAGCCTTTTAAAGAGCATTTTGGCCTTTAAAAAGGTCAAGTTTTAGTATGAGTTTTAGAATGTGACTACGTGTACTTTCTCTTGAAAGAAAAGTAGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGAGACGGAGTCTTGGTCTGTCGCCCAGGCTGGAGTGCAGTGG
..................................................................................................................................................((((((.....(((((....)))))....)))))).....................................................................
.................................................................................................................................................146.............................................................210......................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		GSM532874(GSM532874)
G699T. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR189785SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
.....................................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTCTCG............................................254.000.004.00-------------------------------
.....................................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTCCTT............................................254.000.00-4.00------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTCTCC..............................................274.000.002.002.00------------------------------
......................................................................................................................................................................................TTGTTTGTTTGTTTGTTTGTCTCG............................................244.000.002.002.00------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTCGC...............................................263.000.00-3.00------------------------------
....................................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTCCTC............................................263.000.001.002.00------------------------------
....................................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTTTGTCTAG........................................303.000.003.00-------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTCACT..............................................272.000.002.00-------------------------------
..............................................................................................................................................................................AGTAGTTTTTGTTTGTTTGTTTGTTTCTG...............................................292.000.00-2.00------------------------------
....................................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTTTGTCTTC........................................302.000.00-2.00------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTCTGC..............................................272.000.002.00-------------------------------
....TATGAACTTGGTCGGCTCTTCCA...............................................................................................................................................................................................................................2312.002.00----2.00---------------------------
.....................................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTCTAC............................................252.000.00-2.00------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTCTTT...............................................262.000.002.00-------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTCCTC................................................252.000.001.001.00------------------------------
....................................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTCCTT............................................262.000.002.00-------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGTTTCTC...........................................302.000.002.00-------------------------------
...................................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTCTGC............................................272.000.00-2.00------------------------------
................................................................................................................................................................................TAGTTTTTGTTTGTTTGTTTGTTTCTT...............................................272.000.002.00-------------------------------
................................................................................................................................................................................TAGTTTTTGTTTGTTTGTTTGTTTCTCC..............................................282.000.002.00-------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGTCCT.............................................282.000.001.001.00------------------------------
.........ACTTGGTCGGCTCTTCCAGCTCTG.........................................................................................................................................................................................................................242.000.00-----2.00--------------------------
....TATGAACTTGGTCGGCTCTTCC................................................................................................................................................................................................................................2212.002.00----------1.00---------------1.00-----
....................................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTTTGTCTGC........................................301.000.001.00-------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTCTG................................................251.000.001.00-------------------------------
................................................................................................................................................................................TAGTTTTTGTTTGTTTGTTTGTTTTCT...............................................271.000.00-1.00------------------------------
.........................................................................................................................................................................................................TTTGTTTGAGACGGAGTCTTGGTCCG.......................261.000.00--1.00-----------------------------
....TATGAACTTGGTCGGCTCTT..................................................................................................................................................................................................................................2011.001.00---1.00----------------------------
......................................................................................................................................................ACGTGTACTTTCTCTGGC..................................................................................181.000.00----------------1.00---------------
...................................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTTGTCTC.........................................301.000.001.00-------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGCCC..............................................271.000.001.00-------------------------------
...........TTGGTCGGCTCTTCCAGC.............................................................................................................................................................................................................................1811.001.00-----------------1.00--------------
...................................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTCCCC............................................271.000.00-1.00------------------------------
............................................................................................................................................................................................................................TGGTCTGTCGCCCAGGCTGGAGGGC.....251.000.00-1.00------------------------------
.................................................................................................................................................................................................................AGACGGAGTCTTGGTCTGTCGCTC.................241.000.001.00-------------------------------
......TGAACTTGGTCGGCTCTT..................................................................................................................................................................................................................................1811.001.00---1.00----------------------------
..............................................................................................................................................................................................................TTGAGACGGAGTCTTGGTCCTG......................221.000.001.00-------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGTTCTGT...........................................301.000.001.00-------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTCCCG................................................251.000.00-1.00------------------------------
...................................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTTGTCTGG........................................311.000.001.00-------------------------------
.........................................................................................................................................................................................................TTTGTTTGAGACGGAGTC...............................1801.001.00------------1.00-------------------
....................................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTCATG............................................261.000.001.00-------------------------------
...................................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTCGTC...........................................281.000.001.00-------------------------------
.....................................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTGTCTGC........................................291.000.001.00-------------------------------
.....................................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTGTCCTG........................................291.000.001.00-------------------------------
.....ATGAACTTGGTCGGCTCT...................................................................................................................................................................................................................................1811.001.00------1.00-------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGTCCTG............................................291.000.001.00-------------------------------
......................................................................................................................................................................................TTGTTTGTTTGTTTGTTTGTTTGTCCGC........................................281.000.00-1.00------------------------------
................................................................................................................................................................................TAGTTTTTGTTTGTTTGTTTGTTTGTTTTGGC..........................................321.000.00-1.00------------------------------
....................................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTTCTCC...........................................271.000.001.00-------------------------------
...........TTGGTCGGCTCTTCCAGCT............................................................................................................................................................................................................................1911.001.00--------------------1.00-----------
................................................................................................................................................................................TAGTTTTTGTTTGTTTGTTTGTTTGTCTG.............................................291.000.001.00-------------------------------
......................................................................................................................................................................................TTGTTTGTTTGTTTGTTTGTTTGTCTCG........................................281.000.00-1.00------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGCG...............................................261.000.00-1.00------------------------------
..CTTATGAACTTGGTCGGC......................................................................................................................................................................................................................................1811.001.00--------1.00-----------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGTCAG.............................................281.000.00-1.00------------------------------
.........................................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTGATTTC....................................291.000.00-1.00------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGTTTACC...........................................301.000.00-1.00------------------------------
...................................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTCCTG...........................................281.000.001.00-------------------------------
...TTATGAACTTGGTCGGCTCTTCCAGC.............................................................................................................................................................................................................................2611.001.00----------------------1.00---------
.......................................................................................................................................................................................TGTTTGTTTGTTTGTTTGTTTGTCTGC........................................271.000.001.00-------------------------------
.....................................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTGTCTGG........................................291.000.00-1.00------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGTCTTC............................................291.000.00-1.00------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGTTTCCC...........................................301.000.00-1.00------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTCGAG...............................................261.000.00-1.00------------------------------
.................................................................................................................................................................................................................AGACGGAGTCTTGGTCTGGCC....................211.000.00-1.00------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTCCTT................................................251.000.00-1.00------------------------------
....................................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTCCGT............................................261.000.00-1.00------------------------------
....................................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTTCCTG...........................................271.000.00-1.00------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGTTTCTGT..........................................311.000.00-1.00------------------------------
.....ATGAACTTGGTCGGCTCTTCCAGCC............................................................................................................................................................................................................................251.000.001.00-------------------------------
...................................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTCTCT...........................................281.000.001.00-------------------------------
...TTATGAACTTGGTCGGCT.....................................................................................................................................................................................................................................1811.001.00-------------------1.00------------
..............GTCGGCTCTTCCAGCGG...........................................................................................................................................................................................................................171.000.00-------1.00------------------------
....................................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTCTCG............................................261.000.00-1.00------------------------------
....................................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTTCGTC...........................................271.000.001.00-------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTGGA................................................251.000.00-1.00------------------------------
.....................................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTGTCTTA........................................291.000.001.00-------------------------------
.....................................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTGTCTCC........................................291.000.001.00-------------------------------
...........................................................................................................................................................................................................TGTTTGAGACGGAGTCTTGGTCCG.......................241.000.001.00-------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTCAC...............................................261.000.001.00-------------------------------
....................................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTTCTCG...........................................271.000.00-1.00------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGTTTGATC..........................................311.000.00-1.00------------------------------
...................................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTCGGC...........................................281.000.001.00-------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGTTCCTT...........................................301.000.00-1.00------------------------------
...................................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTCCGG...........................................281.000.00-1.00------------------------------
....................................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTTTGTCTC.........................................291.000.00-1.00------------------------------
..................................................................................................................................................................................GTTTTTGTTTGTTTGTTTGTTTCGAC..............................................261.000.001.00-------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTACTC...............................................261.000.00-1.00------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTCCTT...............................................261.000.001.00-------------------------------
...................................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTCCG............................................271.000.00-1.00------------------------------
................................................................................................................................................................................TAGTTTTTGTTTGTTTGTTTGTTTGTTCTC............................................301.000.001.00-------------------------------
.CCTTATGAACTTGGTCGGCTC....................................................................................................................................................................................................................................2111.001.00-------------------------1.00------
...................................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTTGGCTG.........................................301.000.00-1.00------------------------------
.................................................................................................................................................................................................................AGACGGAGTCTTGGTCGGT......................191.000.00------1.00-------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGTTTGCT...........................................301.000.00-1.00------------------------------
.........................................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTGACTTG....................................291.000.00--1.00-----------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTCTTG................................................251.000.00-1.00------------------------------
............................................................................................................................................................................................................................TGGTCTGTCGCCCAGGCTGGAGGG......241.000.001.00-------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGTTTGGC...........................................301.000.001.00-------------------------------
...................................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTTGTCCTG........................................311.000.00-1.00------------------------------
.........................................................................GAGGTATTCTGAGCCTTTT..............................................................................................................................................................1911.001.00-----------1.00--------------------
..................................................................................................................................................................................GTTTTTGTTTGTTTGTTTGCTCG.................................................231.000.00-1.00------------------------------
................................................................................................................................................................................TAGTTTTTGTTTGTTTGTTTGTTTGTTTTCG...........................................311.000.001.00-------------------------------
...................................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTCCC............................................271.000.001.00-------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGTTTCAGT..........................................311.000.001.00-------------------------------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGTTTTCCC..........................................311.000.00-1.00------------------------------
..........................................................................................................................................................................................TTGTTTGTTTGTTTGTTTGTTTGATCTG....................................281.000.001.00-------------------------------
.....ATGAACTTGGTCGGCT.....................................................................................................................................................................................................................................1611.001.00-----------------------1.00--------
.................................................................................................................................................................................AGTTTTTGTTTGTTTGTTTGTTTGTTCTTC...........................................301.000.00-1.00------------------------------
............................................................................................................................................................................................................GTTTGAGACGGAGTCTTGGTCTGTCGC...................2720.500.50---------------------------0.50----
......................................................................................................................................................................................................TTGTTTGTTTGAGACGGAGTCTTGGTCTG.......................2920.500.50--0.50-----------------------------
.....................CTTCCAGCTACAAACTCTAGGTTTGAAAGG.......................................................................................................................................................................................................3020.500.50----------------------------0.50---
.........................................................................................................................................................................................................TTTGTTTGAGACGGAGTCTTGGTCTG.......................2630.330.330.33-------------------------------
............................................................................................................................................................................................................GTTTGAGACGGAGTCTTGGT..........................2030.330.33-----------------------------0.33--
................................................................................................................................................................TCTCTTGAAAGAAAAGT.........................................................................1750.200.20------------------------------0.20-
....................................TCTAGGTTTGAAAGG.......................................................................................................................................................................................................1570.140.14-------0.14------------------------

Antisense strand
GCCTTATGAACTTGGTCGGCTCTTCCAGCTACAAACTCTAGGTTTGAAAGGTAAGTGATTTTTAAACAGTTTTGAGGTATTCTGAGCCTTTTAAAGAGCATTTTGGCCTTTAAAAAGGTCAAGTTTTAGTATGAGTTTTAGAATGTGACTACGTGTACTTTCTCTTGAAAGAAAAGTAGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGAGACGGAGTCTTGGTCTGTCGCCCAGGCTGGAGTGCAGTGG
..................................................................................................................................................((((((.....(((((....)))))....)))))).....................................................................
.................................................................................................................................................146.............................................................210......................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		GSM532874(GSM532874)
G699T. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR189785SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
......................TTCCAGCTACAAACTCTAAC................................................................................................................................................................................................................ 201.000.00-------------1.00------------------
.............................................................................................................................................................................AAGTAGTTTTTGTTTGTTTGTTTGTTTGAGGC............................................. 321.000.00---------------1.00----------------
.............................................................................................................................................................................................CTCAAACAAACAAACAAACAAA....................................... 2201.001.00------------------1.00-------------
............................................................................................................................TTTAGTATGAGTTTTCAG............................................................................................................ 181.000.00---------1.00----------------------
..........................................................................................................................................................................GAAAAGTAGTTTTTGTTTGAA........................................................... 211.000.00--------------1.00-----------------
.....................................................................................................................................................................................................ACTCCGTCTCAAACAAACAAA................................ 2101.001.00------------------------1.00-------
...............................................................................................................................................................................................TGTTTGTTTGTTTGTTTGATCAG.................................... 231.000.00--1.00-----------------------------
..................................................................................................................................................................TCTTGAAAGAAAAGTCCAG..................................................................... 191.000.001.00-------------------------------
.............................................................................................................................................................................................................................GGTCTGTCGCCCAGGCTGGAGTTGCC... 261.000.00-1.00------------------------------
................................................................................................................CTAAAACTTGACCTTTT......................................................................................................................... 1770.140.14-------------------------------0.14