ID: uc011bzy.1_intron_1_0_chr4_56269506_f.3p
GENE: TMEM165(2)
chr4:56277581-56277830+


(1)
BRAIN
(16)
BREAST
(20)
CELL-LINE
(2)
HEART
(1)
HELA
(3)
LIVER
(1)
OTHER
(18)
SKIN

Sense strand
TTTCAGGTAAGGGATACTCAAATTGTAGCAACCATCGTCAGAGGTTACCGTCGTTACTGATGGCTTTCAGAGTGATTAGACAGTAAATAAGTGTAATGACCATGACAAGAAAATTTTCAAAAAAACTAAATCTTATTTACGTGCAAAATAAAATAATTTTGAATAATGATTTTAAGAAGTAACTGATTTTTTTTTTCCAGAAAATATTTACACCAGCAGCTCCAGTTCATACCAATAAAGAAGATCCTGC
..................................................................................................................................(((((....(((.((((((......))))))....)))....)))))........(((((((......))))))).............................................
...............................................................................................................................128...........................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR343335SRR037938(GSM510476)
293Red. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343334DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR189784SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191476(GSM715586)
19genomic small RNA (size selected RNA from t. (breast)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR037931(GSM510469)
293GFP. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)
SRR029126(GSM416755)
143B. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR191521(GSM715631)
92genomic small RNA (size selected RNA from t. (breast)
SRR029131(GSM416760)
MCF7. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191473(GSM715583)
121genomic small RNA (size selected RNA from . (breast)
SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.................................................................................................................................................................................AGTAACTGATTTTTTTTTTCCAGAA................................................25120.0020.0010.00-2.00------1.00---2.00---1.00------1.00--------------------1.00--------1.00-----1.00----
..................................................................................................................................................................................GTAACTGATTTTTTTTTTCCAGAA................................................24117.0017.00----4.001.00----2.00---1.00-2.00---1.00------1.00---1.00---1.00-------------1.00-1.00-----------1.00-
..................................................................................................................................................................................GTAACTGATTTTTTTTTTCCAGA.................................................23115.0015.00--3.00---2.00-2.00---1.00----1.00-----------1.00---1.00----1.001.001.00-----------1.00------------
....................................................................................................................................TTATTTACGTGCAAATTG....................................................................................................1838.670.33-5.33-----3.33---------------------------------------------------------
.................................................................................................................................................................................AGTAACTGATTTTTTTTTTCCAGA.................................................2417.007.00---------------2.00------1.00--1.00----------1.00---------1.00--------1.00---------
.................................................................................................................................................................................AGTAACTGATTTTTTTTTTCCAG..................................................2316.006.00--------1.00--1.00------1.00---1.00---1.00-----1.00--------------------------------
..................................................................................................................................................................................GTAACTGATTTTTTTTTTCCAG..................................................2214.004.00---1.00--1.00----1.00----------------------------------------------1.00------
...............................................................................................................................................................................GAAGTAACTGATTTTTTTTTTCCAGA.................................................2612.002.00-----2.00-----------------------------------------------------------
............................................................................................................................................................................TAAGAAGTAACTGATTTTTTTTTTCCAGAA................................................3012.002.00-----------------------------------------1.00-1.00---------------------
.................................................................................................................................................................................AGTAACTGATTTTTTTTTTCCATAA................................................252.000.00---------2.00-------------------------------------------------------
...........................................................................................................................................................................TTAAGAAGTAACTGATTT.............................................................1822.002.00-----------------------2.00-----------------------------------------
............................................................................................................................................................................TAAGAAGTAACTGATTTTTTTTTTCCAGA.................................................2912.002.00-------------------1.001.00--------------------------------------------
...............................................................................................................................................................................GAAGTAACTGATTTTTTTTTTCCAG..................................................2511.001.00--------------------------------------------1.00--------------------
..........................................................................................................................................................................................................................GCTCCAGTTCATACCAATAAAG..........2211.001.00---1.00-------------------------------------------------------------
.................................................................................................................................................................................AGTAACTGATTTTTTTTTTCCCGAA................................................251.000.00--------------1.00--------------------------------------------------
.................................................................................................................................................................................AGTAACTGATTTTTTTTTTCCAC..................................................231.000.00-------------------------------------------------------------1.00---
.................................................................................................................................................................................AGTAACTGATTTTTTTTTTCCAGAG................................................2511.007.00------------------------1.00----------------------------------------
....................................................................................................................................................................................................CCAGAAAATATTTACACCAGCAGC..............................2411.001.00------------------------------1.00----------------------------------
...........................................................................................................................................................................TTAAGAAGTAACTGATTTTTTTTTTCCAGAA................................................3111.001.00-----------------------------------------------------------1.00-----
.................................................................................................................................................................................AGTAACTGATTTTTTTTTTCCAAAA................................................251.000.00--1.00--------------------------------------------------------------
...............................................................................................................................AAATCTTATTTACGTGCA.........................................................................................................1811.001.00---1.00-------------------------------------------------------------
............................................................................................................................................................................TAAGAAGTAACTGATTTTTTTTTTCAGA..................................................281.000.00-------------------1.00---------------------------------------------
...................................................................................................................................................................................................................................CATACCAATAAAGAAGATCCTG.2211.001.00--------------------------------------------------------1.00--------
................................................................................................................................................................................................................TACACCAGCAGCTCCAGTTC......................2011.001.00---------------------1.00-------------------------------------------
.......................................AGAGGTTACCGTCGTTACTGATGGC..........................................................................................................................................................................................2511.001.00------------------------------------------1.00----------------------
.............................................................................................................................................................................AAGAAGTAACTGATTTTTTTTTTCCAGAA................................................2911.001.00------------------1.00----------------------------------------------
........................GTAGCAACCATCGTCAGA................................................................................................................................................................................................................1811.001.00------1.00----------------------------------------------------------
..................................................................................................................................................................................................................CACCAGCAGCTCCAGTATA.....................191.000.00---1.00-------------------------------------------------------------
.................................................................................................................................................................................AGTAACTGATTTTTTTTTTCCAGAAA...............................................2611.001.00--------------------------------------------------------------1.00--
.......................................AGAGGTTACCGTCGTTACTG...............................................................................................................................................................................................2011.001.00---1.00-------------------------------------------------------------
............................................................................................................................................................................TAAGAAGTAACTGATTTTTTTTTTCCAG..................................................2811.001.00-----------------------------------------------1.00-----------------
.............................................................................................................................................................................................................ATTTACACCAGCAGCTCCAGTTCATA...................2611.001.00---------------------1.00-------------------------------------------
......................................................................................................................................................................TGATTTTAAGAAGTAACTGA................................................................2011.001.00-----------------------------------------------------1.00-----------
.........................................................................................................................................................................TTTTAAGAAGTAACTGATTTTTTTTTTCCAGA.................................................3211.001.00------------1.00----------------------------------------------------
..................................................................................................................................................................................GTAACTGATTTTTTTTTTCCATAA................................................241.000.00--------------------------------------------------1.00--------------
........................................................................................AAGTGTAATGACCATTCGG...............................................................................................................................................191.000.00----------------------------1.00------------------------------------
..................................TCGTCAGAGGTTACCGTCGTTACTGAT.............................................................................................................................................................................................2711.001.00----------------------------------1.00------------------------------
............................................................................................................................................................................TAAGAAGTAACTGATTTTTTTTTTCCAGG.................................................2911.001.00----------1.00------------------------------------------------------
....................AATTGTAGCAACCATCGTCAG.................................................................................................................................................................................................................2111.001.00------------------------------------------------1.00----------------
................CTCAAATTGTAGCAATATG.......................................................................................................................................................................................................................191.000.00-1.00---------------------------------------------------------------
..................................................................................................................................................................................GTAACTGATTTTTTTTTTCCACC.................................................231.000.00-------------------------------------1.00---------------------------
................................................................................................................................................................................AAGTAACTGATTTTTTTTTTCCAGA.................................................2511.001.00-----1.00-----------------------------------------------------------
....................................................................................................................................TTATTTACGTGCAAA.......................................................................................................1530.330.33-0.33---------------------------------------------------------------
....................................................................................................................................TTATTTACGTGCAAACT.....................................................................................................1730.330.33-0.33---------------------------------------------------------------

Antisense strand
TTTCAGGTAAGGGATACTCAAATTGTAGCAACCATCGTCAGAGGTTACCGTCGTTACTGATGGCTTTCAGAGTGATTAGACAGTAAATAAGTGTAATGACCATGACAAGAAAATTTTCAAAAAAACTAAATCTTATTTACGTGCAAAATAAAATAATTTTGAATAATGATTTTAAGAAGTAACTGATTTTTTTTTTCCAGAAAATATTTACACCAGCAGCTCCAGTTCATACCAATAAAGAAGATCCTGC
..................................................................................................................................(((((....(((.((((((......))))))....)))....)))))........(((((((......))))))).............................................
...............................................................................................................................128...........................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR343335SRR037938(GSM510476)
293Red. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343334DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR189784SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191476(GSM715586)
19genomic small RNA (size selected RNA from t. (breast)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR037931(GSM510469)
293GFP. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)
SRR029126(GSM416755)
143B. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR191521(GSM715631)
92genomic small RNA (size selected RNA from t. (breast)
SRR029131(GSM416760)
MCF7. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191473(GSM715583)
121genomic small RNA (size selected RNA from . (breast)
SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
....................................................................................................................................................................................................................CCAGCAGCTCCAGTTGGAA................... 191.000.00---------------------------------------------------------1.00-------
......................................................................................................................AAAAAAACTAAATCTCTT.................................................................................................................. 181.000.00----------------------------------------------------------------1.00