ID: uc011bzf.1_intron_17_0_chr4_47746601_r.3p
GENE: (3)
chr4:47746551-47746800-


(1)
BREAST 		(7)
CELL-LINE 		(1)
FIBROBLAST 		(7)
HEART 		(1)
LIVER 		(1)
OTHER 		(2)
SKIN

Sense strand
AGCTATTTCTTCTAGAATCAAGACCATAGAATAGCTAAAATCACTGTCATAGGACTGAATGTAAAAATTTAAGTTGCTGACTATAGTAAGTATAAATTAAGATAATATCACAACACAGGGGCTAACTTTAATTTCACTATTATTTCAAAACCTATTCTGTAAAGACACTAATTTTCACCTTTCTCTTTTTTTTTTTTTAGTCATGGACTCCTGCCCTGTAGGTCCTTCTGTGAGGCTGCAAAAGAAGGCT
..................................................................................................................(((((((.......((((......))))........)))...))))..........................................................................................
..........................................................................................................107..........................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577580(Rovira)
total RNA. (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
...............................................................................................................................................................................CACCTTTCTCTTTTTTTTTTTTG....................................................2313.000.008.002.002.001.00----------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTTTTG.................................................2739.000.333.001.671.672.67----------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTTTTTG................................................2838.000.332.671.001.333.00----------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTG......................................................228.000.003.004.00-1.00----------------
........................................................................................................................................................................................................................TGTAGGTCCTTCTGTGAGGCT.............2118.008.00-----3.00--1.002.00-----1.001.00---
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTTG...................................................2537.670.332.333.330.671.000.33---------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTG.......................................................216.000.003.002.00-1.00----------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTTTG..................................................2635.670.332.001.001.331.33----------------
.................................................................................................................................................................................CCTTTCTCTTTTTTTTTTTTTAAG.................................................244.000.001.002.001.00-----------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTG.....................................................2334.000.330.672.000.331.00----------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTG....................................................2433.671.002.001.330.33-----------------
....................................................................................................................................................................................TTCTCTTTTTTTTTTTTTACAG................................................223.000.00---3.00----------------
....................................................................................................................................................................................TTCTCTTTTTTTTTTTTTATG.................................................213.000.00--1.002.00----------------
.................................................................................................................................................................................CCTTTCTCTTTTTTTTTTAAG....................................................212.000.00-1.00-1.00----------------
..................................................................................................................................................................................CTTTCTCTTTTTTTTTTTTCCG..................................................222.000.00-2.00------------------
..................................................................................................................................................................................CTTTCTCTTTTTTTTTTTTCAG..................................................222.000.00--2.00-----------------
....................................................................................................................................................................ACACTAATTTTCACCTTTCTCTTTTTTTTTTTTAG...................................................352.000.00-1.001.00-----------------
.................................................................................................................................................................................CCTTTCTCTTTTTTTTTTTAAAG..................................................232.000.00--1.001.00----------------
.................................................................................................................................................................................CCTTTCTCTTTTTTTTTTTTAAG..................................................232.000.00--2.00-----------------
...............................................................................................................AACACAGGGGCTAACTTCT........................................................................................................................192.000.00------------1.00-1.00-----
........................................................................................................................................................................................................................TGTAGGTCCTTCTGTGAGGCTGCA..........2412.002.00-----1.00---1.00----------
...............................................................................................................................................................................CACCTTTCTCTTTTTTTTTTTG.....................................................222.000.001.00-1.00-----------------
................................................................................................................................................................................ACCTTTCTCTTTTTTTTTTTTG....................................................222.000.001.00-1.00-----------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTCTTG....................................................242.000.002.00-------------------
...............................................................................................................................................................................CACCTTTCTCTTTTTTTTTTTCCCG..................................................252.000.00-2.00------------------
.................................................................................................................................................................................CCTTTCTCTTTTTTTTTTCAAG...................................................222.000.001.001.00------------------
.................................................................................................................................................................................CCTTTCTCTTTTTTTTTTAAAG...................................................222.000.00-1.00-1.00----------------
...............................................................................................................................................................................CACCTTTCTCTTTTTTTTTTTTCTTG.................................................262.000.001.001.00------------------
.........................................................................................................................................................................................................................................GGCTGCAAAAGAAGGC.1612.002.00----------2.00---------
...............................................................................................................................................................................CACCTTTCTCTTTTTTTTTTTTTG...................................................2481.250.250.380.380.120.250.12---------------
....................................................................................................................................................................................TTCTCTTTTTTTTTTTTTAGGGA...............................................231.000.00-------1.00------------
................................................................................................................................................................................ACCTTTCTCTTTTTTTTTTAAT....................................................221.000.00--1.00-----------------
..........................................................................................................................................................................................................ATGGACTCCTGCCCTGGGGG............................201.000.00-------1.00------------
.....................................................................................................................................................................................TCTCTTTTTTTTTTTTTAGCC................................................211.000.00-------1.00------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTTA...................................................2511.001.00-1.00------------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTCTTG...................................................251.000.001.00-------------------
...................................................................................................................................................................................TTTCTCTTTTTTTTTTTTTATTG................................................231.000.00--1.00-----------------
..................................................................................................................................................................................CTTTCTCTTTTTTTTTTCCAG...................................................211.000.001.00-------------------
...............................................................................................................................................................................CACCTTTCTCTTTTTTTTTG.......................................................201.000.00---1.00----------------
...................................................................................................................................................................................TTTCTCTTTTTTTTTTTTTAGCGTC..............................................251.000.00----1.00---------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTT.....................................................2331.001.000.330.33-----0.33------------
....................................................................................................................................................................................TTCTCTTTTTTTTTTTTTATCG................................................221.000.00---1.00----------------
.........................................................................................................................................................................................................................GTAGGTCCTTCTGTGAGGCT.............2011.001.00-----------1.00--------
................................................................................................................................................................................ACCTTTCTCTTTTTTTGAG.......................................................191.000.00------1.00-------------
.................................................................................................................CACAGGGGCTAACTTCCG.......................................................................................................................181.000.00-------------1.00------
....................................................................................................................................................................................TTCTCTTTTTTTTTTTTTACG.................................................211.000.00--1.00-----------------
................................................................................................................................................................................ACCTTTCTCTTTTTTTTTTTGA....................................................221.000.00----1.00---------------
..................................................................................................................................................................................................................................TCTGTGAGGCTGCAAAAGAAGGC.2311.001.00--------1.00-----------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTCTG.......................................................211.000.00-1.00------------------
......................................AATCACTGTCATAGGACTG.................................................................................................................................................................................................1911.001.00------------------1.00-
................................................................................................................................................................................ACCTTTCTCTTTTTTTTTTAAG....................................................221.000.001.00-------------------
...................................................................................................................................TTTCACTATTATTTCCCTG....................................................................................................191.000.001.00-------------------
..................................................................................................................................................................................CTTTCTCTTTTTTTTTTCTAG...................................................211.000.00-1.00------------------
...............................................................................................................................................................................CACCTTTCTCTTTTTTTTTCG......................................................211.000.00-1.00------------------
..................................................................................................................................................................................CTTTCTCTTTTTTTTTTTTTATT.................................................231.000.00---1.00----------------
..................................................................................................................................................................................CTTTCTCTTTTTTTTTTTTTCTGT................................................241.000.001.00-------------------
..................................................................................................................................................................................CTTTCTCTTTTTTTTTTTTTCAAG................................................241.000.00--1.00-----------------
.................................................................................................................................................................................CCTTTCTCTTTTTTTTTATG.....................................................201.000.00--1.00-----------------
...............................................................................................................................................................................CACCTTTCTCTTTTTTTTTTG......................................................211.000.00-1.00------------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTCTTG.....................................................231.000.001.00-------------------
...........................................................................................................................................................................................................TGGACTCCTGCCCTGGGGG............................191.000.00----1.00---------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTATG.....................................................231.000.001.00-------------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTCG........................................................201.000.001.00-------------------
...................................................................................................................................................................................TTTCTCTTTTTTTTTTTTTATG.................................................221.000.00----1.00---------------
.................................................................................................................................................................................CCTTTCTCTTTTTTTTTTTTCTG..................................................231.000.001.00-------------------
....................................................................................................................................................................ACACTAATTTTCACCTTTCTCTTTTTTTTTTTAG....................................................341.000.00--1.00-----------------
..................................................................................................................................................................................CTTTCTCTTTTTTTTTTTTGCT..................................................221.000.00------1.00-------------
.................................................................................................................................................................................CCTTTCTCTTTTTTTTTTAAAT...................................................221.000.00------1.00-------------
................................................................................................................................................................................ACCTTTCTCTTTTTTTTTTTTTAATT................................................261.000.00--1.00-----------------
......................................................................................................................................................................................................................CCTGTAGGTCCTTCTGTGAGGCTGCAAAAGAAG...3311.001.00--------1.00-----------
..................................................................................................................................................................................CTTTCTCTTTTTTTTTTTTTCCAG................................................241.000.00-1.00------------------
................................................................................................................................................................................ACCTTTCTCTTTTTTTTTTTCGAG..................................................241.000.00----1.00---------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTCTGG....................................................241.000.00-1.00------------------
........................................................................................................................................................................................................................TGTAGGTCCTTCTGTGAGGCTGC...........2311.001.00-----------1.00--------
............................................................................................................................................................................................TTTTTTTTTTAGTCATGTTAT.........................................211.000.00------1.00-------------
.................................................................................................................................................................................CCTTTCTCTTTTTTTTTTTTCAG..................................................231.000.001.00-------------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTCTG....................................................241.000.001.00-------------------
...............................................................................................................................................................................CACCTTTCTCTTTTTTTTTTCCTG...................................................241.000.00-1.00------------------
.................................................................................................................................................................................CCTTTCTCTTTTTTTTTTTTTCAG.................................................241.000.00---1.00----------------
..................................................................................................................................................................................CTTTCTCTTTTTTTTTTTTTCTAG................................................241.000.001.00-------------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTATTG....................................................241.000.001.00-------------------
....................................................................................................................................................................ACACTAATTTTCACCTTTC...................................................................1911.001.00--1.00-----------------
...................................................................................................................................................................................TTTCTCTTTTTTTTTTTTTACAG................................................231.000.001.00-------------------
...............................................................................................................................................................................CACCTTTCTCTTTTTTTTTA.......................................................201.000.00---1.00----------------
.................................................................................................................................................................................CCTTTCTCTTTTTTTTTTTTCAAG.................................................241.000.00-1.00------------------
...........................................................................................................................................................................TTTTCACCTTTCTCTTTTTTTTTT.......................................................2411.001.00-1.00------------------
..................................................................................................................................................................................CTTTCTCTTTTTTTTTTTTTAG..................................................2240.750.750.75-------------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTTCG..................................................2630.670.33-0.67------------------
...............................................................................................................................................................................CACCTTTCTCTTTTTTTTTTTTTTG..................................................2580.620.25-0.250.120.120.12---------------
.................................................................................................................................................................................CCTTTCTCTTTTTTTTTTTTTAG..................................................2320.500.500.50-------------------
....................................................................................................................................................................................TTCTCTTTTTTTTTTTTTAGTC................................................2220.500.50-------0.50------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTTTTGT................................................2830.330.33------0.33-------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTTTCG.................................................2730.330.33-0.33------------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTCG...................................................2530.331.00-0.33------------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTTTTCG................................................2830.330.33-0.33------------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTGG...................................................2530.331.00---0.33----------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTCT...................................................2530.331.000.33-------------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTTTTTC................................................2830.330.33-0.33------------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTAG...................................................2530.331.000.33-------------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTT......................................................2230.330.33-0.33------------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTTTCT.................................................2730.330.33-0.33------------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTGCAG..................................................2630.330.33----0.33---------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTT....................................................2430.330.33-0.33------------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTCG....................................................2430.330.33-0.33------------------
..............................................................................................................................................................................TCACCTTTCTCTTTTTTTTTTTTTCTG.................................................2730.330.33----0.33---------------
........................................................................................................................................................................................CTTTTTTTTTTTTTAGTCAT..............................................2040.250.25------0.25-------------
...............................................................................................................................................................................CACCTTTCTCTTTTTTTTTTTTT....................................................2380.250.250.120.12------------------
...............................................................................................................................................................................CACCTTTCTCTTTTTTTTTTTTTTGT.................................................2680.120.25--0.12-----------------

Antisense strand
AGCTATTTCTTCTAGAATCAAGACCATAGAATAGCTAAAATCACTGTCATAGGACTGAATGTAAAAATTTAAGTTGCTGACTATAGTAAGTATAAATTAAGATAATATCACAACACAGGGGCTAACTTTAATTTCACTATTATTTCAAAACCTATTCTGTAAAGACACTAATTTTCACCTTTCTCTTTTTTTTTTTTTAGTCATGGACTCCTGCCCTGTAGGTCCTTCTGTGAGGCTGCAAAAGAAGGCT
..................................................................................................................(((((((.......((((......))))........)))...))))..........................................................................................
..........................................................................................................107..........................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577580(Rovira)
total RNA. (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
............................................................................................................................................................................TTTCACCTTTCTCTTTCACT.......................................................... 201.000.00-----------------1.00--
............................................................................................................................................................................TTTCACCTTTCTCTTCACT........................................................... 191.000.00-----1.00--------------
...........................................................................................................................................................................................CCATGACTAAAAAAAAAAA............................................ 1920.500.50-------------------0.50
..................................................................................................................................................................................................................AGGACCTACAGGGCAG........................ 1650.200.20-------0.20------------