ID: uc011bvq.57
GENE: HTT(58)
chr4:3230142-3230391+


(1)
AGO1.ip OTHER.mut 		(1)
AGO2.ip 		(1)
AGO3.ip 		(13)
B-CELL 		(13)
BRAIN 		(31)
BREAST 		(33)
CELL-LINE 		(2)
CERVIX 		(3)
FIBROBLAST 		(7)
HEART 		(1)
HELA 		(1)
KIDNEY 		(10)
LIVER 		(4)
OTHER 		(36)
SKIN

Sense strand
GAGCTTCCCAGCAGCTGTCCAGCCCCTGCCCCACCCTCTCTGTGGGCTCCCTTGCCCGTAACCTGGGGTGTCTGAACGACCCTTGCTAAGGGGCAGACTGTTAGACGGTAGGCATGTGCTGAGTCCCAGTGGCCACACCCACCCACCAGGAGCCTGGCACTGTGGCCGCAGCACTGAGCAGTGCCCCGTTTCTGTGGCAGGTGTCCATACACTCCGTGTGGCTGGGGAACAGCATCACACCCCTGAGGGA
.................................................................................................(((...(((....(((....)))..))).))).(((((((........((((....))))...)))))))...................................................................................
.................................................................................................98...................................................................167.................................................................................
SizePerfect hitTotal NormPerfect NormSRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189786SRR189787GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577579(Rovira)
total RNA. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR037931(GSM510469)
293GFP. (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR040040(GSM532925)
G612N. (cervix)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191429(GSM715539)
166genomic small RNA (size selected RNA from . (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR040012(GSM532897)
G648N. (cervix)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGT.......................................................................................22144.0044.00-2.00-6.001.00-------3.00---1.00----1.00----1.00--2.001.00-1.00-1.00---------1.00----2.00-1.00-2.00--------1.00------1.00---1.00---1.00----1.00-------------1.00------------1.00-1.00-------1.00---1.00--1.001.00---1.00-----1.00------1.001.00-------1.00--1.00-
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGT.......................................................................................23132.0032.00-1.00--2.001.00-2.00-----1.001.00-----1.00--1.00-1.001.002.00-----1.00--1.00--1.001.00----1.001.001.00------1.00-----1.001.00---------1.00---------------------1.00----1.00--------1.00-------1.00-------------1.00-------------1.00-------1.00------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTAT.....................................................................................25119.0032.009.00-4.00------4.00----------------------------------------------------------------------------------1.00---------------------------------------------1.00-------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGA.......................................................................................23113.0012.00----------1.001.00----------------2.00-----1.00------1.00--1.00---------1.00-----------1.00--------------------------------------1.00---------------------------------1.00--------1.001.00--------
.............................................................................................................................................CCCACCAGGAGCCTGGCACT.........................................................................................20113.0013.00-2.00-----1.001.00-----1.00------1.00--1.00------------1.00----------2.00--------------------------------------------------------------------1.00----1.00-----1.00-----------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTA......................................................................................24112.0032.00--------1.00-------2.00--3.00-------------------------------------------1.001.00---------------------------------------------------1.00-------1.00-------1.00--1.00----------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTG........................................................................................22112.0012.00-1.00--1.00------------------2.00-------1.00----1.00-1.00-------------1.00---------1.00----------------------1.00------------------------1.00-------------------------------------------1.00---
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTT......................................................................................24112.0032.003.00-6.00-----1.00--------1.00--------------------------------------------------------------------1.00-----------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACT.........................................................................................2219.009.00----------1.00---1.00-----1.00------1.00---------1.00------------1.00-------------------1.00----1.00-------1.00--------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACT.........................................................................................2118.008.00-------1.00----------------2.001.00-------------------------------------------------------------------------1.001.00-----------1.00--------1.00------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTG........................................................................................2118.008.00----------------------------------------------------------1.00-----------------1.00----1.00--------------------------------------1.00---------------1.00---1.00-----1.00---1.00-------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTAA.....................................................................................2418.0044.00-----------1.00---2.00----------1.00------1.00---------1.00-------------2.00----------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACTG........................................................................................2317.007.00----1.00-----1.00---------------------1.00----------------------1.00--1.00-------------------1.00-----------1.00-------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACTA........................................................................................2316.009.00---3.00------1.001.00---------1.00----------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTA......................................................................................2316.0044.00-2.00-------1.00-------------------------------------------------1.00----------------------------------------------------------1.00--------------1.00------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACTGT.......................................................................................2416.006.00----1.00--1.00-----1.00--------------1.00-----------------1.00------------------------------------------------------------------------------1.00--------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTAT.....................................................................................2415.0044.00-----------------------------------2.00---1.00----------------------------------------------------------------1.00------------------------------------------1.00----------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTAG.....................................................................................2415.0044.00----------------------2.00--------------------------------------1.00--------------------------------1.00---------------------------------------1.00-----------------------
..............................................................................................................................................CCACCAGGAGCCTGGCACTGT.......................................................................................2115.005.00-----------------1.002.00------------------------------------------------------------------------------1.00----1.00-------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACCGT.......................................................................................2314.002.00-----2.002.00-------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCAA..........................................................................................2013.002.00--------1.00--------------------------------------------------1.00------------------------------------------------------1.00-------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTAG.....................................................................................2513.0032.00------------------------------------------1.00---------------------------------------------1.00-----------------------------------------------------1.00---------------
............................................................................................................................................ACCCACCAGGAGCCTGGCA...........................................................................................1912.002.00------------------------------------------1.00---------1.00---------------------------------------------------------------------------------------------------------
......................................................................................................AGACGGTAGGCATGTGTTCT................................................................................................................................202.000.00-2.00------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTTT.....................................................................................2412.0044.00--------------------------------------------------------1.00----------1.00------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCAC..........................................................................................2012.002.00-----------------------------------------------------------------2.00--------------------------------------------------------------------------------------------
.................................................................................................................................................................GTGGCCGCAGCACTGAGCAGTGC..................................................................2312.002.00---------------2.00----------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................CACCAGGAGCCTGGCACTGT.......................................................................................2012.002.00--------------------1.00------------------------------1.00----------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCAC..........................................................................................2112.002.00--------------------------------------------------1.00--------------------------------------------1.00--------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTA........................................................................................2211.008.00------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
............AGCTGTCCAGCCCCTCCGA...........................................................................................................................................................................................................................191.000.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................CTAAGGGGCAGACTGTTAG..................................................................................................................................................1911.001.00---------------------------------------------1.00----------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACCG........................................................................................2311.002.00------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCAAA.........................................................................................2111.002.00----------------------------------------------------------------------------------------------------------1.00---------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTAGA....................................................................................2511.0044.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................CCACCAGGAGCCTGGCACTGAA......................................................................................2211.001.00-------------------------------------------------------------------------------------------------------1.00------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTTTT....................................................................................2611.0032.00------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
..............................................................................................................................................CCACCAGGAGCCTGGCACTGTA......................................................................................2211.005.00---------------------------------------------------------------------------------------1.00----------------------------------------------------------------------
.....................................................................................................................................................GAGCCTGGCACTGTGGCCG..................................................................................1911.001.00----------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTAGT....................................................................................2511.0044.00--------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------
..........................................................................................................................................................TGGCACTGTGGCCGCAGCACTGA.........................................................................2311.001.00-------------------------------------------1.00------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACAG........................................................................................2311.002.00----------------------------------------------------------------1.00---------------------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGAA......................................................................................2311.008.00----------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTAC.....................................................................................2411.0044.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACTGA.......................................................................................2411.007.00----------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................TAAGGGGCAGACTGTTAGACGGTAG...........................................................................................................................................2511.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACA.........................................................................................2211.002.00--------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGA............................................................................................181.000.00-----------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTTT.....................................................................................2511.0032.00------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------
..........................................................................................................................................CCACCCACCAGGAGCCTGGCA...........................................................................................2111.001.00--------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------
..............................................................................................AGACTGTTAGACGGTAGGCATGTGCTGAGT..............................................................................................................................3011.001.00-----------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................CCACCAGGAGCCTGGCAAT.........................................................................................191.000.00--------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----
.............................................................................................................................................CCCACCAGGAGCCTGGCACTAAT......................................................................................2311.0013.00-----------------------------------------------------------------------------------------------------------------------------------------------------------1.00--
...................................................................................................................................................AGGAGCCTGGCACTGCG......................................................................................171.000.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACTGTCT.....................................................................................2611.006.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTC......................................................................................2411.0032.00------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................ACCAGGAGCCTGGCACTGGGG.....................................................................................211.000.00-----------------------------------------------------------------------------------------1.00--------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCAA..........................................................................................211.000.00-----------------------------------------------------------------------------------------------------------------1.00--------------------------------------------
......................CCCCTGCCCCACCCTCTCGGCC..............................................................................................................................................................................................................221.000.00----------------------------------------------------------------------------------------------------------------------------------1.00---------------------------
................................................................................................................................................ACCAGGAGCCTGGCACTGTGG.....................................................................................2111.001.00------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGAT......................................................................................2311.008.00--------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGTTA...........................................................................................181.000.00-------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTATA......................................................................................2411.008.00---------------------------------------------------------------1.00----------------------------------------------------------------------------------------------
..............................................................................................................................................CCACCAGGAGCCTGGCACTGTT......................................................................................2211.005.00-------------------------------------------------------------------------------1.00------------------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGC.......................................................................................2211.008.00------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGTGCCCCGTTTCTGTGGCA...................................................2011.001.00----------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GTCCCAGTGGCCACATGTC.............................................................................................................191.000.00------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTTCT....................................................................................2611.0032.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGTATC....................................................................................2611.0032.00-------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGC............................................................................................1911.001.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCATAG........................................................................................2211.002.00--------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGTGCCCCGTTTCTGTGGCAA..................................................2111.001.00-------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCAT..........................................................................................2011.002.00---------------------------------------------------------------------------------------------------------------------------------------------1.00----------------
..............................................................................................AGACTGTTAGACGGTAGGCATG......................................................................................................................................2211.001.00-------------------------------------------------------------------------------------------1.00------------------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACGG........................................................................................211.000.00--------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACCCACCAGGAGCCTGGCACTGCA......................................................................................2411.0012.00------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
..............................................................................................................................................CCACCAGGAGCCTGGCACTG........................................................................................2011.001.00-----------------------------------------------------------------------------------------------------1.00--------------------------------------------------------
.............................................................................................................................................CCCACCAGGAGCCTGGCACTGTCT.....................................................................................2411.0044.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CACCCACCAGGAGCCTGGCACTGTAC.....................................................................................2611.006.00------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
GAGCTTCCCAGCAGCTGTCCAGCCCCTGCCCCACCCTCTCTGTGGGCTCCCTTGCCCGTAACCTGGGGTGTCTGAACGACCCTTGCTAAGGGGCAGACTGTTAGACGGTAGGCATGTGCTGAGTCCCAGTGGCCACACCCACCCACCAGGAGCCTGGCACTGTGGCCGCAGCACTGAGCAGTGCCCCGTTTCTGTGGCAGGTGTCCATACACTCCGTGTGGCTGGGGAACAGCATCACACCCCTGAGGGA
.................................................................................................(((...(((....(((....)))..))).))).(((((((........((((....))))...)))))))...................................................................................
.................................................................................................98...................................................................167.................................................................................
SizePerfect hitTotal NormPerfect NormSRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189786SRR189787GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577579(Rovira)
total RNA. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR037931(GSM510469)
293GFP. (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR040040(GSM532925)
G612N. (cervix)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191429(GSM715539)
166genomic small RNA (size selected RNA from . (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR040012(GSM532897)
G648N. (cervix)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
.....................................................................................................................................................................................................................................CAGCATCACACCCCTGGAGA. 201.000.00-------------------------------------------------------1.00------------------------------------------------------------------------------------------------------
.......................................................................CTGAACGACCCTTGCTGGT................................................................................................................................................................ 191.000.00-----------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
.................TCCAGCCCCTGCCCCACACTG.................................................................................................................................................................................................................... 211.000.00-------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................CGGCCACAGTGCCAGG.................................................................................. 1630.330.33-------------------------------------------------------------------------------------------------------------------------------------------------------------0.33