ID: uc011bui.1_intron_5_0_chr3_197500371_f.5p
GENE: FYTTD1(6)
chr3:197500321-197500570+


(9)
B-CELL 		(2)
BRAIN 		(1)
BREAST 		(8)
CELL-LINE 		(2)
CERVIX 		(7)
HEART 		(6)
LIVER 		(1)
OTHER 		(10)
SKIN 		(1)
TESTES

Sense strand
ATCAGAAAGATACTCGTCAGGCAACTTTTCTTTTCAGAAGAGGCCTGAAGGTATTTAAAAACTTTGGCAGTGTTTTTGTTTGTTTGTTTGTTTTTTCCCAAAGAGGATCCTGAGCAGCCACCTTTAGTAAGCCTCAGTCATAGGCAGCATTGGGTTCAGGATGTGAGGCACGTGGTAGTAGATTAGTTCTTCCTGTTGTATGTTTTTTATTTCCCATCTTTTCTTACCCTCAATAGCAATGTCTTATAAG
................................................................((((..(((((.......(((.((((........)))).))).....)))))))))..................................................................................................................................
...............................................................64...........................................................125...........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR189782SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040042(GSM532927)
G428N. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR040035(GSM532920)
G001T. (cervix)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................................AAGGTATTTAAAAACCATT........................................................................................................................................................................................1913.000.00----6.00-5.00---------2.00--------------------------------
........................................................................TTTTTGTTTGTTTGTTTGTTTTTTCGC.......................................................................................................................................................277.000.003.004.00-----------------------------------------------
.....AAAGATACTCGTCAGGCA...................................................................................................................................................................................................................................1817.007.00--2.00--2.00-1.00--1.00--------------------1.00-----------------
........................................................................TTTTTGTTTGTTTGTTTGTTTTTTCGG.......................................................................................................................................................276.000.002.004.00-----------------------------------------------
.......AGATACTCGTCAGGCAACT................................................................................................................................................................................................................................1916.006.00-----1.00---3.00---------------1.00--------------1.00--------
........GATACTCGTCAGGCAACTTT..............................................................................................................................................................................................................................2014.004.00--1.00------------2.00-----------1.00---------------------
..........TACTCGTCAGGCAACTTTTCTTTTCAG.....................................................................................................................................................................................................................2713.003.00-3.00-----------------------------------------------
..........TACTCGTCAGGCAACTTT..............................................................................................................................................................................................................................1813.003.00--1.00----------2.00-----------------------------------
.........................................................................TTTTGTTTGTTTGTTTGTTTTTTCGG.......................................................................................................................................................263.000.001.002.00-----------------------------------------------
.........................................................................TTTTGTTTGTTTGTTTGTTTTTTCGCTG.....................................................................................................................................................283.000.001.001.00---------1.00-------------------------------------
.TCAGAAAGATACTCGTCAGGCAACTTT..............................................................................................................................................................................................................................2712.002.00---1.00-----------------1.00---------------------------
..CAGAAAGATACTCGTCAGG.....................................................................................................................................................................................................................................1912.002.00----------2.00--------------------------------------
.........................................................................TTTTGTTTGTTTGTTTGTTTTTTCGGAG.....................................................................................................................................................282.000.00-2.00-----------------------------------------------
....GAAAGATACTCGTCAGGC....................................................................................................................................................................................................................................1812.002.00--1.00-----------------------------1.00----------------
.......AGATACTCGTCAGGCAACTTTTC............................................................................................................................................................................................................................2312.002.00------------2.00------------------------------------
....................................................................AGTGTTTTTGTTTGTTTGTTTCTTC.............................................................................................................................................................252.000.00-2.00-----------------------------------------------
....GAAAGATACTCGTCAGGCA...................................................................................................................................................................................................................................1912.002.00--1.00--1.00-------------------------------------------
......................................................................TGTTTTTGTTTGTTTGTTTGTTTCCC..........................................................................................................................................................262.000.002.00------------------------------------------------
......AAGATACTCGTCAGGCAA..................................................................................................................................................................................................................................1812.002.00--1.00----1.00-----------------------------------------
..........................................................................TTTGTTTGTTTGTTTGTTTTTTCCCTGG....................................................................................................................................................282.000.002.00------------------------------------------------
......................................................................TGTTTTTGTTTGTTTGTTTGTTTCACT.........................................................................................................................................................272.000.002.00------------------------------------------------
.........ATACTCGTCAGGCAACTTT..............................................................................................................................................................................................................................1912.002.00-------1.00---------------1.00-------------------------
....GAAAGATACTCGTCAGGCAAC.................................................................................................................................................................................................................................2112.002.00------------------1.00--------------------1.00---------
....................................................................AGTGTTTTTGTTTGTTTGTTTGGAC.............................................................................................................................................................252.000.002.00------------------------------------------------
...AGAAAGATACTCGTCAGGCAACTTT..............................................................................................................................................................................................................................2511.001.00--------------------1.00----------------------------
.....................................................................................................AGAGGATCCTGAGCAGCCAC.................................................................................................................................2011.001.00--------------------1.00----------------------------
..........TACTCGTCAGGCAACTTTTCTTTTCAGA....................................................................................................................................................................................................................2811.001.00-----------------1.00-------------------------------
....................................................................AGTGTTTTTGTTTGTTTGTTTGTTTTGTG.........................................................................................................................................................291.000.001.00------------------------------------------------
......................................................................TGTTTTTGTTTGTTTGTTTGTTCCTC..........................................................................................................................................................261.000.00-1.00-----------------------------------------------
...............................................................................TTGTTTGTTTGTTTTTTCCGG......................................................................................................................................................211.000.001.00------------------------------------------------
..CAGAAAGATACTCGTCAGGCAACTTT..............................................................................................................................................................................................................................2611.001.00---1.00---------------------------------------------
...AGAAAGATACTCGTCAGGCAACT................................................................................................................................................................................................................................2311.001.00-----------------------------------------1.00-------
...AGAAAGATACTCGTCAGGC....................................................................................................................................................................................................................................1911.001.00---------------------------------------------1.00---
.................................................................................................................................................................................................TGTTGTATGTTTTTTTCGA......................................191.000.00--------1.00----------------------------------------
..............................................................................TTTGTTTGTTTGTTTTTTCCGTGT....................................................................................................................................................241.000.00-1.00-----------------------------------------------
................................................................................................CCCAAAGAGGATCCTGAGC.......................................................................................................................................1921.001.00-----------------1.00-------------------------------
..........................................................................................................................................................................CGTGGTAGTAGATTAT................................................................161.000.00--------1.00----------------------------------------
..........................................................AAACTTTGGCAGTGTTTTTGT...........................................................................................................................................................................2111.001.001.00------------------------------------------------
..........TACTCGTCAGGCAACTTTTCTTTTCAGAA...................................................................................................................................................................................................................2911.001.00----------------------------1.00--------------------
..............................................................TTTGGCAGTGTTTTTGGTG.........................................................................................................................................................................191.000.00-----------1.00-------------------------------------
......................................................................TGTTTTTGTTTGTTTGTTTGTTTCGC..........................................................................................................................................................261.000.001.00------------------------------------------------
.......AGATACTCGTCAGGCAACTTT..............................................................................................................................................................................................................................2111.001.00---1.00---------------------------------------------
......................................................................TGTTTTTGTTTGTTTGTTTGCGG.............................................................................................................................................................231.000.00-1.00-----------------------------------------------
......................................................................TGTTTTTGTTTGTTTGTTTGTCGTT...........................................................................................................................................................251.000.00-1.00-----------------------------------------------
....................................................................AGTGTTTTTGTTTGTTTGTTTGTTTTCGAG........................................................................................................................................................301.000.00-1.00-----------------------------------------------
..................................................GTATTTAAAAACTTTGGCA.....................................................................................................................................................................................1911.001.00-------------------------------------------1.00-----
.........................................................................................................................................................GTTCAGGATGTGAGGAGTC..............................................................................191.000.00--------------------------------------------1.00----
......................................................................TGTTTTTGTTTGTTTGTTTGTTGGCC..........................................................................................................................................................261.000.001.00------------------------------------------------
......................................................................TGTTTTTGTTTGTTTGTTTGTCTCG...........................................................................................................................................................251.000.001.00------------------------------------------------
....................................................................AGTGTTTTTGTTTGTTTGTTTGCTTG............................................................................................................................................................261.000.001.00------------------------------------------------
........................................................................TTTTTGTTTGTTTGTTTGTTTTTTCGCT......................................................................................................................................................281.000.001.00------------------------------------------------
....................................................................AGTGTTTTTGTTTGTTTGTTTTGTC.............................................................................................................................................................251.000.00-----------1.00-------------------------------------
.TCAGAAAGATACTCGTCAGGCAACTTTT.............................................................................................................................................................................................................................2811.001.00-------------------1.00-----------------------------
....................................................................AGTGTTTTTGTTTGTTTGTTTGTTTCTTG.........................................................................................................................................................291.000.001.00------------------------------------------------
......................................................................TGTTTTTGTTTGTTTGTTTGTTCTTG..........................................................................................................................................................261.000.001.00------------------------------------------------
...AGAAAGATACTCGTCAGGCAAC.................................................................................................................................................................................................................................2211.001.00--------------------------------------1.00----------
......................................................................TGTTTTTGTTTGTTTGTTTGTTCACT..........................................................................................................................................................261.000.001.00------------------------------------------------
......................................................................TGTTTTTGTTTGTTTGTTTGTCCT............................................................................................................................................................241.000.001.00------------------------------------------------
....GAAAGATACTCGTCAGGCAACT................................................................................................................................................................................................................................2211.001.00--------------1.00----------------------------------
.....AAAGATACTCGTCAGGCAACT................................................................................................................................................................................................................................2111.001.00------------------------------------1.00------------
........................................................................TTTTTGTTTGTTTGTTTGTTTTTTCGCC......................................................................................................................................................281.000.001.00------------------------------------------------
.........................................................................TTTTGTTTGTTTGTTTGTTTTTTCGGTG.....................................................................................................................................................281.000.00-1.00-----------------------------------------------
......AAGATACTCGTCAGG.....................................................................................................................................................................................................................................1511.001.00------------------------------------------1.00------
........................................................................TTTTTGTTTGTTTGTTTGTTTTTTCTCG......................................................................................................................................................281.000.001.00------------------------------------------------
......................................................................TGTTTTTGTTTGTTTGTTTGTCTTC...........................................................................................................................................................251.000.00-1.00-----------------------------------------------
....................................................................AGTGTTTTTGTTTGTTTGTTTGTTTCAC..........................................................................................................................................................281.000.001.00------------------------------------------------
.......................................................................GTTTTTGTTTGTTTGTTTGTTTCGAC.........................................................................................................................................................261.000.00-1.00-----------------------------------------------
......................................................................TGTTTTTGTTTGTTTGTTTGCTGG............................................................................................................................................................241.000.00-1.00-----------------------------------------------
......................................................................TGTTTTTGTTTGTTTGTTTGTTCGGA..........................................................................................................................................................261.000.00-1.00-----------------------------------------------
............................................................................TGTTTGTTTGTTTGTTTTTTCCGGA.....................................................................................................................................................251.000.001.00------------------------------------------------
....................................................................AGTGTTTTTGTTTGTTTGTTTGTTTTGAG.........................................................................................................................................................291.000.001.00------------------------------------------------
.........................................................................TTTTGTTTGTTTGTTTGTTTTTTCGCC......................................................................................................................................................271.000.00-1.00-----------------------------------------------
.........................................................................................................................................................................................................................CTTTTCTTACCCTCATAT...............181.000.00---------------------------------1.00---------------
..CAGAAAGATACTCGTCAGGC....................................................................................................................................................................................................................................2011.001.00----------------------------------1.00--------------
.......................................................................GTTTTTGTTTGTTTGTTTGCTCG............................................................................................................................................................231.000.001.00------------------------------------------------
...............GTCAGGCAACTTTTCTTTTCAGAAGAGG...............................................................................................................................................................................................................2811.001.00-------------------------------------1.00-----------
....................................................................AGTGTTTTTGTTTGTTTGTTTGTTCG............................................................................................................................................................261.000.001.00------------------------------------------------
....GAAAGATACTCGTCAGG.....................................................................................................................................................................................................................................1711.001.00---1.00---------------------------------------------
...............................................AAGGTATTTAAAAACCGT.........................................................................................................................................................................................181.000.00----------------------1.00--------------------------
.....................................................................GTGTTTTTGTTTGTTTGTTTCGTT.............................................................................................................................................................241.000.00-1.00-----------------------------------------------
......................................................................TGTTTTTGTTTGTTTGTTTGTTCTGC..........................................................................................................................................................261.000.001.00------------------------------------------------
.................................................................................................................................................................................................TGTTGTATGTTTTTTTATG......................................191.000.00--------1.00----------------------------------------
.....AAAGATACTCGTCAGGCAAC.................................................................................................................................................................................................................................2011.001.00---1.00---------------------------------------------
....GAAAGATACTCGTCAGGCAA..................................................................................................................................................................................................................................2011.001.00------------------1.00------------------------------
....................................................................AGTGTTTTTGTTTGTTTGTCTGG...............................................................................................................................................................231.000.001.00------------------------------------------------
..........................................................................................................................................................................CGTGGTAGTAGATTAGATAG............................................................201.000.00--------1.00----------------------------------------
.................................................................................................CCAAAGAGGATCCTGAGC.......................................................................................................................................1820.500.50---------------------0.50---------------------------
................................................................TGGCAGTGTTTTTGTTTGTTTGT...................................................................................................................................................................2320.500.500.50------------------------------------------------
...............................TTTCAGAAGAGGCCTG...........................................................................................................................................................................................................1640.250.25------------------------------------------------0.25

Antisense strand
ATCAGAAAGATACTCGTCAGGCAACTTTTCTTTTCAGAAGAGGCCTGAAGGTATTTAAAAACTTTGGCAGTGTTTTTGTTTGTTTGTTTGTTTTTTCCCAAAGAGGATCCTGAGCAGCCACCTTTAGTAAGCCTCAGTCATAGGCAGCATTGGGTTCAGGATGTGAGGCACGTGGTAGTAGATTAGTTCTTCCTGTTGTATGTTTTTTATTTCCCATCTTTTCTTACCCTCAATAGCAATGTCTTATAAG
................................................................((((..(((((.......(((.((((........)))).))).....)))))))))..................................................................................................................................
...............................................................64...........................................................125...........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR189782SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040042(GSM532927)
G428N. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR040035(GSM532920)
G001T. (cervix)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
........................................................................................................................TATGACTGAGGCTTACTAAAGG............................................................................................................ 2211.001.00-------1.00-----------------------------------------
........................................................................................................................................................................................AGTTCTTCCTGTTGTATG................................................ 181.000.00------------------------------1.00------------------
.............................................................................................................................................................................................TTCCTGTTGTATGTTTTTTAA........................................ 211.000.00------------------------1.00------------------------
.................................................................................................................................................................................................TGTTGTATGTTTTTTAAAA...................................... 191.000.00-----------------------------1.00-------------------
...............................................................................................................................................TGAACCCAATGCTGC............................................................................................ 1530.330.33-----------------------------------------------0.33-