ID: uc011bsq.1_intron_17_0_chr3_193044847_r.5p
GENE: (12)
chr3:193048712-193048961-


(1)
BRAIN 		(8)
BREAST 		(9)
CERVIX 		(2)
HEART 		(2)
OTHER 		(8)
SKIN

Sense strand
CACAGAGAATCAACATGTGTGGGCAAATAAACCTCGTGTGCTTTGACAAAGTATGATCCAGACTTCTCAGGTTTAATGTTAATGATTTCAAGGCATGGTGGAGCTGGGAAGAACCTCAGAAAATGTCTAGTCCAGTGTTCCCATTTTACAGATAGGAACGTTGAGGCCAGAGAAGGTCACAGAGTGAGCTAGTGCAAGATCACATTCTAGGAGCCTGCTCTGCTGACTCTTAAGGTTAGCAGCTTAGCCA
.................................................................................................((((((.((((((..((((.(((.....)))))....)).)))))))))))).....................................................................................................
.....................................................................................86................................................................152................................................................................................
SizePerfect hitTotal NormPerfect NormSRR040029(GSM532914)
G026T. (cervix)		SRR040043(GSM532928)
G428T. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		TAX577589(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR040015(GSM532900)
G623T. (cervix)		TAX577739(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		SRR040016(GSM532901)
G645N. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		SRR040039(GSM532924)
G531T. (cervix)		SRR191423(GSM715533)
137genomic small RNA (size selected RNA from . (breast)		SRR040012(GSM532897)
G648N. (cervix)		TAX577744(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
.................................................................................................................................GTCCAGTGTTCCCATGAAT......................................................................................................1913.000.006.001.00-2.001.00-----------1.00----1.00-1.00------
.................................................................................................................................GTCCAGTGTTCCCATGTAT......................................................................................................194.000.003.00----1.00------------------------
.................................................................................................................................GTCCAGTGTTCCCATTAAT......................................................................................................194.000.00-3.00------------------1.00---------
...........AACATGTGTGGGCAAATAA............................................................................................................................................................................................................................1913.003.00--------2.00--------1.00------------
.................................................................................................................................GTCCAGTGTTCCCATTAGT......................................................................................................193.000.00-3.00----------------------------
.................................................................................................................................GTCCAGTGTTCCCATGCTT......................................................................................................192.000.001.00----------1.00------------------
.................................................................................................................................GTCCAGTGTTCCCATGCAT......................................................................................................192.000.00------1.001.00----------------------
.................................................................................................................................GTCCAGTGTTCCCATGAGT......................................................................................................192.000.00-1.001.00---------------------------
.................................................................................................................................GTCCAGTGTTCCCATTTAT......................................................................................................192.000.00-2.00----------------------------
.................................................................................................................................GTCCAGTGTTCCCATGACT......................................................................................................192.000.001.00----1.00------------------------
.................................................................................................................................GTCCAGTGTTCCCATTAATC.....................................................................................................202.000.00-2.00----------------------------
..CAGAGAATCAACATGTGTGGGCAAATAA............................................................................................................................................................................................................................2811.001.00-------------------1.00----------
......GAATCAACATGTGTGGGCAAATAA............................................................................................................................................................................................................................2411.001.00--------------------------1.00---
.................................................................................................................................GTCCAGTGTTCCCATTTGT......................................................................................................191.000.00-1.00----------------------------
.................................................................................................................................GTCCAGTGTTCCCATGTA.......................................................................................................181.000.00----1.00-------------------------
..........................................................................................AGGCATGGTGGAGCTGGGAAGAACC.......................................................................................................................................2511.001.00--------------1.00---------------
.................................................................................................................................GTCCAGTGTTCCCATTAAA......................................................................................................191.000.001.00-----------------------------
.................................................................................................................................GTCCAGTGTTCCCATGGC.......................................................................................................181.000.00--1.00---------------------------
.................................................................................................................................GTCCAGTGTTCCCATTAGTC.....................................................................................................201.000.00-1.00----------------------------
.................................................................................................................................GTCCAGTGTTCCCATGAAG......................................................................................................191.000.00-----1.00------------------------
.................................................................................................GTGGAGCTGGGAAGAGTGA......................................................................................................................................191.000.00------------1.00-----------------
.................................................................................................................................GTCCAGTGTTCCCATGGAT......................................................................................................191.000.00------------------------1.00-----
.................................................................................................................................GTCCAGTGTTCCCATTAAG......................................................................................................191.000.00----------------------1.00-------
......................................................................................................GCTGGGAAGAACCTCTG...................................................................................................................................171.000.00---------1.00--------------------
.................................................................................................................................GTCCAGTGTTCCCATTCTT......................................................................................................191.000.00---------------1.00--------------
.........TCAACATGTGTGGGCAAATAA............................................................................................................................................................................................................................2111.001.00------------------1.00-----------
.................................................................................................................................GTCCAGTGTTCCCATTATT......................................................................................................191.000.001.00-----------------------------
.................................................................................................................................GTCCAGTGTTCCCATGCCT......................................................................................................191.000.00--1.00---------------------------
.................................................................................................................................GTCCAGTGTTCCCATGTAA......................................................................................................191.000.00----1.00-------------------------
.................................................................................................................................GTCCAGTGTTCCCATGCAC......................................................................................................191.000.00-------1.00----------------------
.................................................................................................................................GTCCAGTGTTCCCATTAA.......................................................................................................181.000.00---1.00--------------------------
.............CATGTGTGGGCAAATAA............................................................................................................................................................................................................................1721.001.00-------------------------1.00----
.................................................................................................................................GTCCAGTGTTCCCATGATT......................................................................................................191.000.00------1.00-----------------------
...................................................................................GATTTCAAGGCATGGTGGAGC..................................................................................................................................................2111.001.00-------------1.00----------------
.................................................................................................................................GTCCAGTGTTCCCATGTTC......................................................................................................191.000.001.00-----------------------------
.............CATGTGTGGGCAAATAATCC.........................................................................................................................................................................................................................2020.501.00---------------------------0.50--
..............ATGTGTGGGCAAATAA............................................................................................................................................................................................................................1640.250.25-----------------------------0.25

Antisense strand
CACAGAGAATCAACATGTGTGGGCAAATAAACCTCGTGTGCTTTGACAAAGTATGATCCAGACTTCTCAGGTTTAATGTTAATGATTTCAAGGCATGGTGGAGCTGGGAAGAACCTCAGAAAATGTCTAGTCCAGTGTTCCCATTTTACAGATAGGAACGTTGAGGCCAGAGAAGGTCACAGAGTGAGCTAGTGCAAGATCACATTCTAGGAGCCTGCTCTGCTGACTCTTAAGGTTAGCAGCTTAGCCA
.................................................................................................((((((.((((((..((((.(((.....)))))....)).)))))))))))).....................................................................................................
.....................................................................................86................................................................152................................................................................................
SizePerfect hitTotal NormPerfect NormSRR040029(GSM532914)
G026T. (cervix)		SRR040043(GSM532928)
G428T. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		TAX577589(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR040015(GSM532900)
G623T. (cervix)		TAX577739(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		SRR040016(GSM532901)
G645N. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		SRR040039(GSM532924)
G531T. (cervix)		SRR191423(GSM715533)
137genomic small RNA (size selected RNA from . (breast)		SRR040012(GSM532897)
G648N. (cervix)		TAX577744(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
.....................................................................................................................................................CTGGCCTCAACGTTCCTATCT................................................................................ 2111.001.00----------1.00-------------------
.....................................................................................................AGCTGGGAAGAACCTTCC................................................................................................................................... 181.000.001.00-----------------------------
....................................................................................................................GGACTAGACATTTTCTG..................................................................................................................... 1720.500.50----------------------------0.50-