ID: uc011bsa.1_intron_6_0_chr3_186450464_f.3p
GENE: (7)
chr3:186456688-186456937+


(2)
B-CELL 		(2)
BRAIN 		(14)
BREAST 		(5)
CELL-LINE 		(1)
FIBROBLAST 		(14)
LIVER 		(3)
OTHER 		(6)
SKIN

Sense strand
AAAAGGAAATGGGACCAACCGATAGCCAAATATTTTAAATATGCATGCCAAGCTTTAATGCCAAACGTGTACTTTTTTGTATGTAACTCTCTAAGTTGGTCAATTAAAATTTCAAGATTCTCCCTTAACATTTCTTAAAGATAAATGATTTATTATGCAAATATTTTTAAGCGTTTACTTTGTACTAATTAATTTTTCAGGTGGTGGCTGGCAAGAAATATTTTATTGACTTCGTGGCCAGGGAAACCAC
.......................................................................................................................................(((((.((((((.((((.(((....)))....)))))))))))))))....................................................................
.......................................................................................................................................136.....................................................192........................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		TAX577738(Rovira)
total RNA. (breast)		TAX577580(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		TAX577743(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR038857(GSM458540)
D20. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR189782SRR189784TAX577588(Rovira)
total RNA. (breast)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577739(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		TAX577746(Rovira)
total RNA. (breast)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR038855(GSM458538)
D10. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		TAX577579(Rovira)
total RNA. (breast)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191457(GSM715567)
27genomic small RNA (size selected RNA from t. (breast)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
......................................................................................................................................................................................................AGGTGGTGGCTGGCAAGAAAT...............................21135.0035.002.007.003.007.005.00--3.002.00---3.00-2.00---------1.00----------------------
.........................................................................................................................................................................AGCGTTTACTTTGTAAAAA..............................................................1926.000.00---------5.001.005.00-2.00-1.001.00--1.00---1.00-2.002.001.00-1.00--1.00----1.001.00--------
......................................................................................................................................................................................................AGGTGGTGGCTGGCAAGAA.................................19124.0024.003.001.002.002.00--8.004.002.00---1.00-------1.00--------------------------
.........................................................................................................................................................................................................TGGTGGCTGGCAAGAAATA..............................19120.0020.00-19.00------------------1.00--------------------------
.......................................................................................................................................................................................................GGTGGTGGCTGGCAAGAAATA..............................21115.0015.005.00-6.00---1.00-1.00---------------1.00-----------------1.00----
......................................................................................................................................................................................................AGGTGGTGGCTGGCAAGAAA................................20114.0014.001.004.004.002.001.00---2.00--------------------------------------
.......................................................................................................................................................................................................GGTGGTGGCTGGCAAGAAAT...............................20112.0012.003.002.003.002.00--1.00-------1.00--------------------------------
......................................................................................................................................................................................................AGGTGGTGGCTGGCAAGAAATA..............................22111.0011.005.006.00---------------------------------------------
.......................................................................................................................................................................................................GGTGGTGGCTGGCAAGAAA................................19110.0010.002.001.005.00-2.00------------------------------------------
.......................................................................................................................................................................................................GGTGGTGGCTGGCAAGAA.................................1817.007.005.00-2.00--------------------------------------------
..........................................................................................................................................................................................................GGTGGCTGGCAAGAAATATT............................2017.007.002.002.001.002.00-------------------------------------------
.....................................................................................................................................................................................................CAGGTGGTGGCTGGCAAGAAATA..............................2315.005.001.00-3.001.00-------------------------------------------
......................................................................................................................................................................................................AGGTGGTGGCTGGCAAGAAATATTT...........................2515.005.004.00-1.00--------------------------------------------
......................................................................................................................................................................................................AGGTGGTGGCTGGCAAGAAATATTTT..........................2615.005.00-1.001.003.00-------------------------------------------
........................................................................................................................................................................AAGCGTTTACTTTGTAAAAA..............................................................205.000.00---------1.00------1.00----------1.00-------1.001.00----------
..........................................................................................................................................................................................................GGTGGCTGGCAAGAAATA..............................1815.005.002.002.00-1.00-------------------------------------------
.........................................................................................................................................................................................................TGGTGGCTGGCAAGAAAT...............................1834.334.33-2.33-1.000.67---0.33--------------------------------------
.....................................................................................................................................................................................................CAGGTGGTGGCTGGCAAGAAATATT............................2514.004.003.00-1.00--------------------------------------------
......................................................................................................................................................................................................AGGTGGTGGCTGGCAAGAAATT..............................2214.0035.00-1.00-2.001.00------------------------------------------
.........................................................................................................................................................................AGCGTTTACTTTGTAAAA...............................................................184.000.00---------1.001.00------------1.00----------------1.00------
........................................................................................................................................................................AAGCGTTTACTTTGTAAAA...............................................................194.000.00---------------1.00-----2.00-----------1.00-------------
......................................................................................................................................................................................................AGGTGGTGGCTGGCAAGA..................................1833.333.331.00--1.000.67---------0.67--------------------------------
.....................................................................................................................................................................................................CAGGTGGTGGCTGGCAAGAAATAT.............................2413.003.001.001.001.00--------------------------------------------
......................................................................................................................................................................................................AGGTGGTGGCTGGCAAGAAATATT............................2413.003.002.001.00---------------------------------------------
.......................................................................................................................................................................................................GGTGGTGGCTGGCAAGAAATATT............................2313.003.002.00-1.00--------------------------------------------
.........................................................................................................................................................................................................TGGTGGCTGGCAAGAAATATT............................2113.003.001.001.00-1.00-------------------------------------------
......................................................................................................................................................................................................AGGTGGTGGCTGGCAAGAAATAT.............................2313.003.001.00--2.00-------------------------------------------
...............................................................................................................................................................................................ATTTTTCAGGTGGTGGTGCA.......................................203.000.00------------------2.00---1.00------------------------
..........................................................................................................................................................................................................GGTGGCTGGCAAGAAATATTT...........................2113.003.002.00-1.00--------------------------------------------
........................................................................................................................................................................................................GTGGTGGCTGGCAAGAAA................................1832.672.67-1.00-0.330.33---0.33---0.33-------------------------------0.33--
......................................................................................................................................................................................................AGGTGGTGGCTGGCAAGAAATTT.............................2312.0035.00---2.00-------------------------------------------
............................................................................................................................................ATAAATGATTTATTATTCAT..........................................................................................202.000.00------------------------------2.00----------------
.......................................................................................................................................................................TAAGCGTTTACTTTGAAAA................................................................192.000.00----------------1.00----------------------1.00-------
.....................................................................................................................................................................................................CAGGTGGTGGCTGGCAAGAAA................................2112.002.002.00----------------------------------------------
.......................................................................................................................................................................................................GGTGGTGGCTGGCAAGAAATAT.............................2212.002.002.00----------------------------------------------
.....................................................................................................................................................................................................CAGGTGGTGGCTGGCAAGAAAT...............................2212.002.001.00-1.00--------------------------------------------
..........................................................................................................................................................................................................GGTGGCTGGCAAGAAATAGGT...........................2112.005.00----2.00------------------------------------------
..........................................................................................................................................................................................................GGTGGCTGGCAAGAAATATTTT..........................2212.002.001.001.00---------------------------------------------
.........................................................................................................................................................................AGCGTTTACTTTGTAACAA..............................................................192.000.00----------1.00--1.00---------------------------------
...............................................................AACGTGTACTTTTTTGTATGTAAC...................................................................................................................................................................2412.002.001.00-1.00--------------------------------------------
........................................................................................................................................................................................................GTGGTGGCTGGCAAGAAAT...............................1932.002.00-0.330.330.330.33-0.67----------------------------------------
......................................................................................................................................................................................................AGGTGGTGGCTGGCAAGAAATTTT............................2411.0035.00-1.00---------------------------------------------
.......................................................................................................................................................................................................GGTGGTGGCTGGCAAGAAATATTT...........................2411.001.00--1.00--------------------------------------------
......................................................................................................................................................................................................AGGTGGTGGCTGGCAAGAAATATA............................2411.003.00--1.00--------------------------------------------
........................................................................................................................................................................AAGCGTTTACTTTGTAAA................................................................181.000.00-----------------------------------------1.00-----
.........................................................................................................................................................................................................TGGTGGCTGGCAAGACATA..............................191.000.00-------1.00---------------------------------------
...................................................................................................................................................................................................................................GACTTCGTGGCCAGGGAAAC...2011.001.00--1.00--------------------------------------------
........................................................................................................................................................................................................GTGGTGGCTGGCAAGAAATA..............................2011.001.00-1.00---------------------------------------------
...................................................................................................................................................................................................................................GACTTCGTGGCCAGGGAAACCA.2211.001.001.00----------------------------------------------
.....................................................................................................................................................................................................CAGGTGGTGGCTGGCAAGAAATATTTT..........................2711.001.00---1.00-------------------------------------------
.......................................................................................................................................................................................................GGTGGTGGCTGGCAAGATA................................191.000.001.00----------------------------------------------
..................................................................................................................................................................................................................GCAAGAAATATTTTATTGA.....................1911.001.00----1.00------------------------------------------
.........................................................................................................................................................................AGCGTTTACTTTGTAAATA..............................................................191.000.00-------------1.00---------------------------------
......................................................................................................................................................................................................................................TTCGTGGCCAGGGAAACC..1811.001.001.00----------------------------------------------
................................................................................................................................................................................................TTTTTCAGGTGGTGGTGCA.......................................191.000.00----------------------1.00------------------------
......................................................................................................................................................................................................AGGTGGTGGCTGGCAAGAATT...............................2111.0024.00---1.00-------------------------------------------
.........................................................................................................................................................................AGCGTTTACTTTGTACAAA..............................................................191.000.00----------1.00------------------------------------
.........................................................................................................................................................................AGCGTTTACTTTGTATAAA..............................................................191.000.00---------------1.00-------------------------------
.......................................................................................................................................................................TAAGCGTTTACTTTGAA..................................................................171.000.00-------------------------------1.00---------------
.......................................................................................................................................................................................................GGTGGTGGCTGGCAAGAAAA...............................2011.0010.00-1.00---------------------------------------------
.......................................................................................................................................................................................................GGTGGTGGCTGGCAAGAAATATTTTA.........................2611.001.00--1.00--------------------------------------------
........................................................................................................................................................................AAGCGTTTACTTTGTAAAAT..............................................................201.000.00-----------------------------1.00-----------------
..........................................................................................................................................................................................................GGTGGCTGGCAAGAAATATTTTATTGAC....................2811.001.001.00----------------------------------------------
..........................................................................................................................................................................................................GGTGGCTGGCAAGAAATATTTTAT........................2411.001.00--1.00--------------------------------------------
.........................................................................................................................................................................AGCGTTTACTTTGTAAATG..............................................................191.000.00-------------------1.00---------------------------
................AACCGATAGCCAAATCTCA.......................................................................................................................................................................................................................191.000.00-----------------1.00-----------------------------
.........................................................................................................................................................................................................TGGTGGCTGGCAAGAAATATTTTATT.......................2611.001.00-1.00---------------------------------------------
..............................................................................GTATGTAACTCTCTAAGTTGGTCAAT..................................................................................................................................................2611.001.001.00----------------------------------------------
.....................................................................................................................................................................................................CAGGTGGTGGCTGGCAAG...................................1811.001.001.00----------------------------------------------
.........................................................................................................................................................................AGCGTTTACTTTGTAAA................................................................171.000.00----------1.00------------------------------------
............................................................................................................................................................................................................TGGCTGGCAAGAAATATA............................181.000.00---1.00-------------------------------------------
..................................................................................................................................................................................................................................TGACTTCGTGGCCAGGGAAACC..2211.001.00----1.00------------------------------------------
........................................................................................................................................................................................................GTGGTGGCTGGCAAGTAAT...............................191.000.00--1.00--------------------------------------------
.........................................................................................................................................................................................................TGGTGGCTGGCAAGAAATATA............................211.000.00-1.00---------------------------------------------
....................................................................................................................................................................................................TCAGGTGGTGGCTGGTTTT...................................191.000.00----------------------------------1.00------------
............................................................................................................................................................................................................TGGCTGGCAAGAAATATTTTATTG......................2411.001.00--1.00--------------------------------------------
...AGGAAATGGGACCAACC......................................................................................................................................................................................................................................1720.500.50-------------------------------------------0.50---
................................................................ACGTGTACTTTTTTGT..........................................................................................................................................................................1620.500.50-----------------0.50-----------------------------
.........................................................................................................................................................................................................TGGTGGCTGGCAAGAAAA...............................1850.200.20-0.20---------------------------------------------
.........................................................................................................................................................................................................TGGTGGCTGGCAAGAAA................................1750.200.20---------------------------------------------0.20-
........................................................................................................................................................................AAGCGTTTACTTTGT...................................................................1560.170.17----------------------------------------------0.17

Antisense strand
AAAAGGAAATGGGACCAACCGATAGCCAAATATTTTAAATATGCATGCCAAGCTTTAATGCCAAACGTGTACTTTTTTGTATGTAACTCTCTAAGTTGGTCAATTAAAATTTCAAGATTCTCCCTTAACATTTCTTAAAGATAAATGATTTATTATGCAAATATTTTTAAGCGTTTACTTTGTACTAATTAATTTTTCAGGTGGTGGCTGGCAAGAAATATTTTATTGACTTCGTGGCCAGGGAAACCAC
.......................................................................................................................................(((((.((((((.((((.(((....)))....)))))))))))))))....................................................................
.......................................................................................................................................136.....................................................192........................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		TAX577738(Rovira)
total RNA. (breast)		TAX577580(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		TAX577743(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR038857(GSM458540)
D20. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR189782SRR189784TAX577588(Rovira)
total RNA. (breast)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577739(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		TAX577746(Rovira)
total RNA. (breast)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR038855(GSM458538)
D10. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		TAX577579(Rovira)
total RNA. (breast)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191457(GSM715567)
27genomic small RNA (size selected RNA from t. (breast)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
....................................................................................................................................................................................................................AAGAAATATTTTATTCGTT................... 1914.000.00-----14.00-----------------------------------------
..........................................................................................................................................................................................................GGTGGCTGGCAAGAAGC............................... 172.000.00----------------------------2.00------------------
......................TAGCCAAATATTTTAAATAGTAG............................................................................................................................................................................................................. 231.000.00-----------------1.00-----------------------------