ID: uc011bqt.1_intron_22_0_chr3_183699663_r.3p
GENE: (6)
chr3:183699613-183699862-


(1)
AGO2.ip
(4)
B-CELL
(1)
BREAST
(5)
CELL-LINE
(1)
HEART
(1)
KIDNEY
(1)
LIVER
(1)
OTHER
(8)
SKIN
(1)
XRN.ip

Sense strand
ATAAAGAGATAAGAATTCAGTAATGTTTTATTACAATTCAATAGGTCACTTTTATTAAAGACAGTACGATTACATAACATTTGGCCCATCCTAGCAAGCAGGATTATATGCTCATTTTATTGAGAATGACCTTAAGCAGATTAGGTAGTTCTCAAGTTTGAATGAGCTTTAATTTGGCGTGGCATCGCTTTTCCTTTCAGATGTTTGCATCACGGCTCACAGCATATTTCAGGAGAAAATGCGTGGCCGC
................................................................................................((((........)))).......((((((((.((((..........)))).))))))))...............................................................................................
..........................................................................................91...............................................................156............................................................................................
SizePerfect hitTotal NormPerfect NormSRR343337SRR343336SRR343335SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR343334SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
.......................................................................................................................................GCAGATTAGGTAGTTGG..................................................................................................17232.501.508.504.502.5012.003.50----------------0.50--0.50-0.50
.......................................................................................................................................GCAGATTAGGTAGTTGGT.................................................................................................18226.001.5010.007.503.50-2.00---------1.001.00------0.500.50---
.......................................................................................................................................GCAGATTAGGTAGTTGGTG................................................................................................19218.501.506.003.004.00-2.001.00-----------0.500.500.500.50----0.50-
.......................................................................................................................................GCAGATTAGGTAGTTG...................................................................................................16210.001.504.004.002.00------------------------
.......................................................................................................................................GCAGATTAGGTAGTTGGTA................................................................................................1923.001.50--2.00-1.00----------------------
.......................................................................................................................................GCAGATTAGGTAGTT....................................................................................................1521.501.501.00-0.50------------------------
.......................................................................................................................................GCAGATTAGGTAGTTGGTT................................................................................................1921.501.50-----0.50------1.00--------------
.................................................................................................................................................................................................CTTTCAGATGTTTGCAGC.......................................181.000.00---------1.00-----------------
...............................................................................................AAGCAGGATTATATGTAA.........................................................................................................................................181.000.00----------------1.00----------
............................................................................................AGCAAGCAGGATTATATACC..........................................................................................................................................201.000.00----1.00----------------------
............................................................................ACATTTGGCCCATCCTAGCAAGCA......................................................................................................................................................2411.001.00-------1.00-------------------
......................................................................................................................................AGCAGATTAGGTAGTTGG..................................................................................................181.000.00-1.00-------------------------
...........................................................................................................................................................................................................TTTGCATCACGGCTCACAGC...........................2011.001.00------1.00--------------------

Antisense strand
ATAAAGAGATAAGAATTCAGTAATGTTTTATTACAATTCAATAGGTCACTTTTATTAAAGACAGTACGATTACATAACATTTGGCCCATCCTAGCAAGCAGGATTATATGCTCATTTTATTGAGAATGACCTTAAGCAGATTAGGTAGTTCTCAAGTTTGAATGAGCTTTAATTTGGCGTGGCATCGCTTTTCCTTTCAGATGTTTGCATCACGGCTCACAGCATATTTCAGGAGAAAATGCGTGGCCGC
................................................................................................((((........)))).......((((((((.((((..........)))).))))))))...............................................................................................
..........................................................................................91...............................................................156............................................................................................
SizePerfect hitTotal NormPerfect NormSRR343337SRR343336SRR343335SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR343334SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
..........................................................AGACAGTACGATTACAGATG............................................................................................................................................................................ 202.000.00--------1.00-1.00----------------
..........................................................AGACAGTACGATTACATGATG........................................................................................................................................................................... 211.000.00-------------1.00-------------
....................................................................................................................................TAAGCAGATTAGGTATGCT................................................................................................... 191.000.00-----------1.00---------------