ID: uc011bqc.1_intron_0_0_chr3_178957853_r.3p
GENE: KCNMB3(3)
chr3:178957803-178958052-


(1)
B-CELL 		(1)
BRAIN 		(9)
CELL-LINE 		(4)
HEART 		(1)
HELA 		(1)
LIVER 		(1)
OTHER 		(3)
SKIN

Sense strand
ATAGTTTCAGATTTTCAATCAAGTATTCTTAGTCATTACTGAAAAGAACTCAAATTCAGCTAAATTTTGATTATTAGCAACACCGGCTTGCTTTTCAAAAGGAATGGCAAAAGAGAATTATCACAGTTTTTTGCTTATGTAGTACACTAAGGATTGTTTGGACACAAAAAGTAATTTTTCTTTTTTTTTTTAATAAACAGCGTGATGTTACAGACTGCAGAGTTAAAGAAAAGCAGACATTGACAGTTTC
.................................................................................................(((((((....(((((((((((((.(((((((((((((.....))))....)))))))))(((....)))...)))))))).))))))))))))...........................................................
.............................................................................................94........................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189785SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		GSM359180(GSM359180)
hela_phil_smrna_cyto. (hela)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR037937(GSM510475)
293cand2. (cell line)
.................................................................................................................................................................................TTCTTTTTTTTTTTAATAATTTG..................................................2339.000.0015.0021.00-1.00--2.00----------------
..................................................................................................................................................................................TCTTTTTTTTTTTAATAATTTG..................................................2212.000.0010.001.00----1.00----------------
.............................................................................................................................................................................ATTTTTCTTTTTTTTTTTATG........................................................214.000.003.00-----1.00----------------
.............................................................................................................................................................................ATTTTTCTTTTTTTTTTTACCC.......................................................224.000.00--3.00-1.00------------------
.............................................................................................................................................................................ATTTTTCTTTTTTTTTTTAATAAAAAG..................................................273.000.001.001.00-1.00-------------------
...................................................................................................................................................................................CTTTTTTTTTTTAATAATTTG..................................................213.000.002.00--1.00-------------------
...............................................................................................................................................................................TTTTCTTTTTTTTTTTAATAACAAG..................................................252.000.00-2.00---------------------
.............................................................................................................................................................................ATTTTTCTTTTTTTTTTTAATAAAAAT..................................................272.000.00-2.00---------------------
............................................................................................................................................................................AATTTTTCTTTTTTTTTTTAAAT.......................................................232.000.001.00--------1.00-------------
...........................................................................................................................................................................TAATTTTTCTTTTTTTTTTTCAG........................................................232.000.001.00-----1.00----------------
...................................................................................................................................................................................CTTTTTTTTTTTAATAAACAG..................................................2121.501.501.000.50---------------------
.......................................TGAAAAGAACTCAAAGCG.................................................................................................................................................................................................181.000.00--------1.00--------------
...................................................................................................................................................................................CTTTTTTTTTTTAATAAATTCG.................................................221.000.001.00----------------------
.............................................................................................................................................................................ATTTTTCTTTTTTTTTTTAACGGC.....................................................241.000.00--1.00--------------------
...................................................................................................................................................................................CTTTTTTTTTTTAATAAACCA..................................................211.000.001.00----------------------
.................................................................................................................................................................................................................ACAGACTGCAGAGTTGGCT......................191.000.00-------------1.00---------
...........................................................................................................................................................................TAATTTTTCTTTTTTTTTTTAATAACCAG..................................................291.000.00---1.00-------------------
..........................................................................................................................................................................GTAATTTTTCTTTTTTTTTGGC..........................................................221.000.00--1.00--------------------
.........................................................................................................................................................................AGTAATTTTTCTTTTTTTTTTTAC.........................................................241.000.00--1.00--------------------
..............................................................................................................................................................................TTTTTCTTTTTTTTTTTAATAAACAG..................................................2611.001.001.00----------------------
............................................................................................................................................................................AATTTTTCTTTTTTTTTTTAATAAACAG..................................................2811.001.001.00----------------------
................................TCATTACTGAAAAGAACACG......................................................................................................................................................................................................201.000.00---------------1.00-------
..................................................................................................................................................................................TCTTTTTTTTTTTAATAATTGG..................................................221.000.00-1.00---------------------
.............................................................................................................................................................................ATTTTTCTTTTTTTTTTGATG........................................................211.000.00--1.00--------------------
.............................................................................................................................................................................ATTTTTCTTTTTTTTTTTACG........................................................211.000.00-1.00---------------------
...........................................................................................................................................................................TAATTTTTCTTTTTTTTTTTGCAG.......................................................241.000.00----1.00------------------
...........................................................................................................................................................................TAATTTTTCTTTTTTTTAAAT..........................................................211.000.00---1.00-------------------
.............................................................................................................................................................................ATTTTTCTTTTTTTTTTGCG.........................................................201.000.00--1.00--------------------
.............................................................................................................................................................................ATTTTTCTTTTTTTTTTTATGCA......................................................231.000.00--1.00--------------------
.............................................................................................................................................................................ATTTTTCTTTTTTTTTTGGGC........................................................211.000.00--1.00--------------------
....................................................................................................................................................................................TTTTTTTTTTTAATAAACCG..................................................201.000.00-------1.00---------------
...........................................................................................................................................................................TAATTTTTCTTTTTTTTTACAG.........................................................221.000.00---1.00-------------------
...........................................................................................................................................................................TAATTTTTCTTTTTTTTTTAAG.........................................................221.000.00---1.00-------------------
...................................................................................................................................................................................CTTTTTTTTTTTAATAATATG..................................................211.000.00-1.00---------------------
................................................................................................................................................................................TTTCTTTTTTTTTTTAATACAT....................................................221.000.00---1.00-------------------
.............................................................................................................................................................................ATTTTTCTTTTTTTTTTGCAG........................................................211.000.00----1.00------------------
.............................................................................................................................................................................ATTTTTCTTTTTTTTTTTATAAG......................................................231.000.00------1.00----------------
..............................................................................................................................................................................TTTTTCTTTTTTTTTTTAATAAAAAG..................................................261.000.00-1.00---------------------
.............................................................................................................................................................................ATTTTTCTTTTTTTTTTTAATAAATAG..................................................271.000.001.00----------------------
...........................................................................................................................................................................TAATTTTTCTTTTTTTTTACT..........................................................211.000.00---1.00-------------------
.............................................................................................................................................................................ATTTTTCTTTTTTTTTTTATC........................................................211.000.00--1.00--------------------
....................................TACTGAAAAGAACTCTG.....................................................................................................................................................................................................171.000.00------------1.00----------
.............................................................................................................................................................................ATTTTTCTTTTTTTTTTGGCT........................................................211.000.00----1.00------------------
............................................................................................................................................................................AATTTTTCTTTTTTTTTTGCAG........................................................221.000.00----1.00------------------
...........................................................................................................................................................................TAATTTTTCTTTTTTTTTGGAC.........................................................221.000.00----1.00------------------
....................................................................................................................................................................................TTTTTTTTTTTAATAAACCTAG................................................221.000.00------1.00----------------
..................................................................................................AAGGAATGGCAAAAGAGAATTATC................................................................................................................................2420.500.50--------------------0.50--
................................................................................................................................................CACTAAGGATTGTTTGGACA......................................................................................2020.500.50---------------------0.50-
....................................................................................................................................................AAGGATTGTTTGGACACA....................................................................................1820.500.50-----------------0.50-----
................................................................................................................................................CACTAAGGATTGTTTGGA........................................................................................1820.500.50-------------------0.50---
.............................................................................................................................................................................................................TGTTACAGACTGCAGAGTTAAAGAAAAGCAG..............3120.500.50----------------0.50------
......................GTATTCTTAGTCATTACTGAAAAGAA..........................................................................................................................................................................................................2620.500.50------------------0.50----
............................................................................................................................................................................AATTTTTCTTTTTTTTTTTAAT........................................................2260.170.17--0.17--------------------

Antisense strand
ATAGTTTCAGATTTTCAATCAAGTATTCTTAGTCATTACTGAAAAGAACTCAAATTCAGCTAAATTTTGATTATTAGCAACACCGGCTTGCTTTTCAAAAGGAATGGCAAAAGAGAATTATCACAGTTTTTTGCTTATGTAGTACACTAAGGATTGTTTGGACACAAAAAGTAATTTTTCTTTTTTTTTTTAATAAACAGCGTGATGTTACAGACTGCAGAGTTAAAGAAAAGCAGACATTGACAGTTTC
.................................................................................................(((((((....(((((((((((((.(((((((((((((.....))))....)))))))))(((....)))...)))))))).))))))))))))...........................................................
.............................................................................................94........................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189785SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		GSM359180(GSM359180)
hela_phil_smrna_cyto. (hela)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR037937(GSM510475)
293cand2. (cell line)
.................................................................................................................AGAATTATCACAGTTAGAG...................................................................................................................... 199.000.00-----8.00----1.00------------
...........TTTTCAATCAAGTATTCTTAGTCATACTA.................................................................................................................................................................................................................. 291.000.00----1.00------------------
....................................................................................................................................................................................................................GTCAATGTCTGCTTTTCTTTAACTCTGCAGTC...... 3221.001.00-----------1.00-----------
............................................................................................................................AGTTTTTTGCTTATGAGTG........................................................................................................... 191.000.00-------1.00---------------
.......................................................................................................................................................................................................TTTAACTCTGCAGTCTGTAACATCACGC....................... 2811.001.00--------------1.00--------
...........TTTTCAATCAAGTATTCTTAGTCATACTG.................................................................................................................................................................................................................. 291.000.00----1.00------------------
................................................................................................................................................................................................................................AACTGTCAATGTCTGCTTTTCTTT.. 2420.500.50--------0.50--------------
......................................................................................................................................................................AAAAGAAAAATTACTTTT.................................................................. 1880.120.12----------------------0.12