ID: uc011bno.1_intron_3_0_chr3_147120600_r.5p
GENE: (1)
chr3:147121551-147121800-


(4)
AGO2.ip
(3)
B-CELL
(5)
BRAIN
(12)
BREAST
(24)
CELL-LINE
(3)
CERVIX
(5)
LIVER
(2)
OTHER
(7)
SKIN
(2)
UTERUS

Sense strand
ATGCCTTTTGGTTAGAAAGAATTGAAAATAATAATACCCTCTGGGAAAAGGTGAGTCTACCCCCCTGCCTCCTAGGCCTGGACCTAGAAAAGAGGGGAGATGGAAGGGTAAAAGCCGCCAAGCCAGTTGGAATTCTGGTTGGACGTTGAGGGGGAGAGAGAGAGAGAGAGATCTTTGTGCATAGAGAACTGGATACCGTTTAAGATAACAGAGTCCCACTTGGATTTGGCCTGTGGTTCAACAAGTTAAA
.......................................................(((..((((((.(((((((((......)))))....))))...((((....(((....))).((.((((((........)))))))).)))).))))))..)))...........................................................................................
..................................................51........................................................................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormGSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM956925PAZD5GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189787SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
TAX577579(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040016(GSM532901)
G645N. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR189782TAX577740(Rovira)
total RNA. (breast)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR038855(GSM458538)
D10. (cell line)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR038861(GSM458544)
MM466. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577742(Rovira)
total RNA. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR038862(GSM458545)
MM472. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191455(GSM715565)
181genomic small RNA (size selected RNA from . (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..................................................................................................................................................TGAGGGGGAGAGAGAGAGACTTT.................................................................................2317.000.00---------1.00-1.001.00--1.001.00--1.00--1.00------1.00--1.00--1.00-1.00----1.00------1.00-1.00--1.00-1.00-----1.00---
..................................................................................................................................................TGAGGGGGAGAGAGAGAGACT...................................................................................215.000.00-------1.00---------------1.00----1.00------------------------1.00----1.00-------
..................................................................................................................................................TGAGGGGGAGAGAGAGAGAATTT.................................................................................233.000.00-------------1.00---1.00-------1.00----------------------------------------
..................................................................................................................................................TGAGGGGGAGAGAGAGAGAGTTT.................................................................................232.000.00---------------1.00-----------------------------1.00--------------------
......................................................GTCTACCCCCCTGCCCCC..................................................................................................................................................................................182.000.00------------------------------1.00------------------------1.00----------
..................................................................................................................................................TGAGGGGGAGAGAGAGAGACTGT.................................................................................232.000.00--------------1.00-------------------------1.00-------------------------
..................................................................................................................................................TGAGGGGGAGAGAGAGAGAAATT.................................................................................232.000.00----------1.00---------1.00---------------------------------------------
..................................................................................................................................................TGAGGGGGAGAGAGAGAGACTCT.................................................................................231.000.00-------1.00----------------------------------------------------------
.....................................................................................................................................................GGGGGAGAGAGAGAGAGAGAGA...............................................................................2201.001.00-------------------------------1.00----------------------------------
...................................................................................CTAGAAAAGAGGGGACCGG....................................................................................................................................................191.000.00------------------------------------1.00-----------------------------
..................................................................................................................................................TGAGGGGGAGAGAGAGAGACATC.................................................................................231.000.00-----------------------------------------------1.00------------------
.....................................................................................................................................................GGGGGAGAGAGAGAGAGAGAGATGA............................................................................251.000.00----------------------------------1.00-------------------------------
..................................................................................................GATGGAAGGGTAAAATTGT.....................................................................................................................................191.000.00-----------------------------------------------------------1.00------
..................................................................................................................................................TGAGGGGGAGAGAGAGAGCC....................................................................................201.000.00--------------------------------------1.00---------------------------
..................................................................................................................................................TGAGGGGGAGAGAGAGAGACTAT.................................................................................231.000.00---------1.00--------------------------------------------------------
......................................................................................................................................................................................AGAGAACTGGATACCATAG.................................................191.000.00---------------------------------------------------------------1.00--
..................................................................................................................................................TGAGGGGGAGAGAGAGAGGCTT..................................................................................221.000.00--------------------------------------------1.00---------------------
..................................................................................................................................................TGAGGGGGAGAGAGAGAGATGT..................................................................................221.000.00-------1.00----------------------------------------------------------
..................................................................................................................................................TGAGGGGGAGAGAGAGAGAGTTA.................................................................................231.000.00----------------1.00-------------------------------------------------
..................................................................................................................................................TGAGGGGGAGAGAGAGAGACGT..................................................................................221.000.00------------1.00-----------------------------------------------------
.....................................................................................................................................................GGGGGAGAGAGAGAGAGAGA.................................................................................2001.001.00-1.00----------------------------------------------------------------
...................................................................................................................................................GAGGGGGAGAGAGAGAGACT...................................................................................201.000.00---------------------------------1.00--------------------------------
..................................................................................................................................................TGAGGGGGAGAGAGAGATTTT...................................................................................211.000.00------------------------1.00-----------------------------------------
..................................................................................................................................................TGAGGGGGAGAGAGAGAGAATT..................................................................................221.000.00----------1.00-------------------------------------------------------
..................................................................................................................................................TGAGGGGGAGAGAGAGAGACTT..................................................................................221.000.00--------------1.00---------------------------------------------------
......................................................................................................................................................................................................................CCCACTTGGATTTGGTGGG.................191.000.00-------------1.00----------------------------------------------------
..................................................................................................................................................TGAGGGGGAGAGAGAGAGAGTTTT................................................................................241.000.00--------1.00---------------------------------------------------------
.....................................................................................................................................................GGGGGAGAGAGAGAGAGAGAGGGC.............................................................................241.000.00---------------------1.00--------------------------------------------
..................................................................................................................................................TGAGGGGGAGAGAGAGCG......................................................................................181.000.00--------------------------------------------------1.00---------------
..................................................................................................................................................TGAGGGGGAGAGAGAGACTTT...................................................................................211.000.00-----------1.00------------------------------------------------------
..........................................................................................AGAGGGGAGATGGAAGAATT............................................................................................................................................201.000.00------------------------------------------------1.00-----------------
..................................................................................................................................................TGAGGGGGAGAGAGAGAGAGAGAG................................................................................2490.110.11-----------------------------------------------------------------0.11

Antisense strand
ATGCCTTTTGGTTAGAAAGAATTGAAAATAATAATACCCTCTGGGAAAAGGTGAGTCTACCCCCCTGCCTCCTAGGCCTGGACCTAGAAAAGAGGGGAGATGGAAGGGTAAAAGCCGCCAAGCCAGTTGGAATTCTGGTTGGACGTTGAGGGGGAGAGAGAGAGAGAGAGATCTTTGTGCATAGAGAACTGGATACCGTTTAAGATAACAGAGTCCCACTTGGATTTGGCCTGTGGTTCAACAAGTTAAA
.......................................................(((..((((((.(((((((((......)))))....))))...((((....(((....))).((.((((((........)))))))).)))).))))))..)))...........................................................................................
..................................................51........................................................................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormGSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM956925PAZD5GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189787SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
TAX577579(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040016(GSM532901)
G645N. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR189782TAX577740(Rovira)
total RNA. (breast)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR038855(GSM458538)
D10. (cell line)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR038861(GSM458544)
MM466. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577742(Rovira)
total RNA. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR038862(GSM458545)
MM472. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191455(GSM715565)
181genomic small RNA (size selected RNA from . (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.....................................................................................................................................................CTCTCTCTCTCTCTCTCCCCC................................................................................ 210166.00166.0032.0022.0024.0030.0021.0024.0013.00-----------------------------------------------------------
.....................................................................................................................................................TCTCTCTCTCTCTCTCCCCC................................................................................. 20037.0037.009.0011.0010.002.002.00-3.00-----------------------------------------------------------
.....................................................................................................................................................TCTCTCTCTCTCTCTCTCCCCC............................................................................... 2209.009.001.005.003.00---------------------------------------------------------------
......................................................................................................................................................TCTCTCTCTCTCTCTCTCCCC............................................................................... 2105.005.00-1.001.001.001.00-1.00-----------------------------------------------------------
....................................................................................................................................................CTCTCTCTCTCTCTCTCCCCCT................................................................................ 2204.004.002.001.00--1.00-------------------------------------------------------------
.......................................................................................................................................................GGGAGAGAGAGAGAGAGAGG............................................................................... 203.000.002.00----------------------------------------1.00------------------------
.....................................................................CTAGGTCCAGGCCTAGGA................................................................................................................................................................... 1812.002.00--------2.00---------------------------------------------------------
......................................................................................................................................................GGGGAGAGAGAGAGAGAGG................................................................................. 192.000.00-1.00----1.00-----------------------------------------------------------
.................................................................................................................AACTGGCTTGGCGGC.......................................................................................................................... 1512.002.00------------------1.00------------------------1.00----------------------
......................................................................................................................................................GGGGAGAGAGAGAGAGAGGG................................................................................ 201.000.001.00-----------------------------------------------------------------
....................................................................................................................................................TCTCTCTCTCTCTCTCCCCCT................................................................................. 2101.001.00--1.00---------------------------------------------------------------
....................................................................................................................................................CTCTCTCTCTCTCCCCCT.................................................................................... 1801.001.00---1.00--------------------------------------------------------------
...................................................................................................................................................................................AACGGTATCCAGTTCTCTATG.................................................. 2111.001.00----------------------------------------------1.00-------------------
......................................................................................................................................................GGGGAGAGAGAGAGAGAGG................................................................................. 191.000.00----------------------------------------------------1.00-------------
...................................................TGAGTCTACCCCCCTGGG..................................................................................................................................................................................... 181.000.00-------------------------------------------------------------1.00----
......................................................................................................................................................GGGGAGAGAGAGAGAGAGAGGG.............................................................................. 221.000.001.00-----------------------------------------------------------------
.................AGAATTGAAAATAATAAAGAG.................................................................................................................................................................................................................... 211.000.00----------------------------------------------------------------1.00-
..............GAAAGAATTGAAAATAACAG........................................................................................................................................................................................................................ 201.000.00------------------------------------------------------------1.00-----
....................................................TAGGAGGCAGGGGGGTAGACTC................................................................................................................................................................................ 2211.001.00---------------------------1.00--------------------------------------
..................................................................................................................................................................................................GTGGGACTCTGTTATCTTAAACGGT............................... 2511.001.00---------------------------------------------------------1.00--------
.....................TTGAAAATAATAATACAAG.................................................................................................................................................................................................................. 191.000.00---------------------------------------1.00--------------------------
......................................................................................................................................................GGGGAGAGAGAGAGAGAGAGG............................................................................... 211.000.001.00-----------------------------------------------------------------
....................................................................................................................................................TCTCTCTCTCTCTCCCCCT................................................................................... 1901.001.00-1.00----------------------------------------------------------------
.......................................................................................................................................................GGGAGAGAGAGAGAGAGG................................................................................. 181.000.00-1.00----------------------------------------------------------------
....................................................................................................................................................AGGGGGAGAGAGAGAGAGAGGTCA.............................................................................. 241.000.00--------------------------1.00---------------------------------------