ID: uc011beh.1_intron_3_0_chr3_52721632_f
GENE: GNL3(4)
chr3:52721582-52722174+


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(2)
AGO2.ip
(12)
B-CELL
(3)
BRAIN
(10)
BREAST
(46)
CELL-LINE
(4)
CERVIX
(2)
FIBROBLAST
(4)
HEART
(1)
HELA
(1)
KIDNEY
(6)
LIVER
(2)
OTHER
(1)
RRP40.ip
(23)
SKIN
(1)
TESTES
(2)
UTERUS
(2)
XRN.ip

Sense strand
TTGAAACTAATCCTGATATTAAGCCATCAAATGTGGAACCTATGGAAAAGGTATGATTAGGTCTCTTTATGAATGAGAGATCAGGGGTTTTGATTTTGGTTTTTTTGCTTGGGCCTGAGTGCAGTGGCACAATCACAACTCACTGCAACCTGGACCACCCAGGCTCAAGCAGTCTTACCACCTCAGTCTCCAAGTAGCTGGGACTACAGAAGCACACCATCACGCCTGGCTAATTTTTTTTAGCAGACACGGGCTTTCACTATATTGCCAAGGCTGGTCTCAAGTGATCCACCCAACTCAGCCTCCCGAAGTTTCTGGTATTACAGGTGTGGGCTGTTGTGCCTGGCTGAGAGATGAGTTCTGATGCAGAAATAAAAGCACATCCACAGGCTGCTGAGCTTCTTGGGAGGAAGACAACTGAGTTCAGACTCCATCTTACCTATTTAACAACTGCAAGGGCTGCTACTCAGCTGTGGAAAATGGAGTTAGAGGTTACAGTTGCTCTACTTCTAATTTTGTGTTATTTCCCCCTTTATCCTCTAGGAGTTTGGGCTTTGCAAAACTGAGAACAAAGCCAAGTCGGGCAAACAGAA
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................(((((..(((....)))...(((((((..((((((((((............))))))))))..))....))))))))))............................................................
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................444................................................................................................543................................................
SizePerfect hitTotal NormPerfect NormSRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR037937(GSM510475)
293cand2. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR189782SRR189784TAX577742(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577745(Rovira)
total RNA. (breast)
SRR037938(GSM510476)
293Red. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR040035(GSM532920)
G001T. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
TAX577588(Rovira)
total RNA. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR189787GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343336SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343337SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR029131(GSM416760)
MCF7. (cell line)
SRR040034(GSM532919)
G001N. (cervix)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038854(GSM458537)
MM653. (cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR038853(GSM458536)
MELB. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTTTT..........................................................................................................................................................................................................................................................185157.200.2071.8058.20-0.20--10.00-0.401.000.40---0.80-1.40------1.601.600.20-----0.600.60--0.20--------1.601.40-0.20--0.200.20-------------------1.00---------------------------0.400.400.60---0.40-0.400.40-0.20---0.20--0.20-0.200.20--
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTTTA..........................................................................................................................................................................................................................................................1858.400.202.204.40----0.20-0.20-----0.40-0.20--------------0.20--------------0.200.20-------------------------------------------------------------------0.20-------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTTT...........................................................................................................................................................................................................................................................1756.400.20----0.20---------2.60-1.80-----------------0.20---------------------------------------------------------------------0.40-0.40----0.200.20---0.20----0.20-
.............................................................................................................................................ACTGCAACCTGGACCACCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................2016.006.00----------6.00----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTTTTA.........................................................................................................................................................................................................................................................1955.200.201.203.40----0.40---------------------------------------0.20----------------------------------------------------------------------------
...........................CAAATGTGGAACCTATGGAAAAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.005.00---5.00-----------------------------------------------------------------------------------------------------------------------
................................GTGGAACCTATGGAAAAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.005.00---4.00------------------------1.00----------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGTTTGGGCTTTGCA..................................1814.004.00-----------2.00--------------------------1.00---------------------1.00--------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGTCGGGCAAACAGA.1814.004.00-------2.00-1.00---1.00-------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCAAGTCGGGCAAACAGAA2213.003.00---------------------3.00-----------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAACTGAGAACAAAGCCAAGTCGG..........2813.003.00-------------1.00------1.00---------------------------------------------------------------------1.00--------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCCAAGTCGGGCAAACA...2013.003.00-------3.00-------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TCACGCCTGGCTAATTTTTTTTCCTT............................................................................................................................................................................................................................................................................................................................................................263.000.00--3.00------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAACTGAGAACAAAGCC.................2013.003.00-----------1.00-------------------------------------------------1.00---------------1.00---------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................GCCTGGCTGAGAGATGAGTTCTGA.....................................................................................................................................................................................................................................2412.002.00----2.00----------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAACTGAGAACAAAGCCAAGTCGGGCAA......3112.002.00--------------------------------1.00--1.00---------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAACTGAGAACAAAGCCAAGTCGG..........2712.002.00--------------------------2.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTGTT..........................................................................................................................................................................................................................................................182.000.001.00-------1.00------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................TGTGGGCTGTTGTGCCTGGCTGAGAGAT..............................................................................................................................................................................................................................................2812.002.00--------2.00------------------------------------------------------------------------------------------------------------------
....................................................ATGATTAGGTCTCTTAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................172.000.00---------------------------2.00-----------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAACAAAGCCAAGTCGGGCAAACA...2612.002.00-2.00-------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAAGCCAAGTCGGGCAAACAGAA2712.002.00---1.00------------------------1.00----------------------------------------------------------------------------------------------
.........................ATCAAATGTGGAACCTATGGAAAAGGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.002.00-------2.00-------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAACTGAGAACAAAGCCAAGTCG...........2712.002.00------------------------------------2.00--------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAAGTCGGGCAAACA...1812.002.00---------1.00-------------------1.00---------------------------------------------------------------------------------------------
........................................................................................TTTGATTTTGGTTTTTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................182.000.00--2.00------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAAAGCCAAGTCGGGCAAACAGAATCCA322.000.00-----2.00---------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGCAAGGGCTGC..................................................................................................................................1812.002.00-------------------------------2.00-------------------------------------------------------------------------------------------
.......................................................................................................TTTGCTTGGGCCTGAGTGCAGTGGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002.00--2.00------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAACAAAGCCAAGTCGGGCAAACAGA.2912.002.00---------------------------------1.00-------1.00---------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCAAGTCGGGCAAACA...1912.002.00---------2.00-----------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGAGAACAAAGCCAAGTCGGG.........2412.002.00---2.00-----------------------------------------------------------------------------------------------------------------------
.........................ATCAAATGTGGAACCTATGGAAAAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002.00--------2.00------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGAGAACAAAGCCAAGTCGGGC........2512.002.00---2.00-----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCAGCTGTGGAAAATGG..............................................................................................................2012.002.00----2.00----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAAGCCAAGTCGGGCAAACAG..2512.002.00----2.00----------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTTATTTCCCCCTTTATCCTCTAG..................................................2712.002.00------------------------2.00--------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................TTTTTTTTAGCAGACACGGGCTCTC...............................................................................................................................................................................................................................................................................................................................................252.000.00-----2.00---------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTTTTT.........................................................................................................................................................................................................................................................1951.800.200.401.20-------0.20-----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTTTAA.........................................................................................................................................................................................................................................................1951.600.200.800.60-------------------------------------------------------------------------------------------------0.20-----------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTGAGAACAAAGC..................1731.331.33------------------------------------------------1.33--------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTTCT..........................................................................................................................................................................................................................................................1851.200.200.400.40----0.20-0.20------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTT............................................................................................................................................................................................................................................................1651.200.20--------------0.40-0.60-----------------------------------------------------------------------------------0.20----------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGAACAAAGCCAAGTCGGGC........2311.001.00----------------------------------------1.00----------------------------------------------------------------------------------
..................................................................................................................................................................................................TAGCTGGGACTACAGAAGCA...........................................................................................................................................................................................................................................................................................................................................................................................2001.001.00----------------------------------1.00----------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GGGACTACAGAAGCACACTACC....................................................................................................................................................................................................................................................................................................................................................................................221.000.00-----------------------------1.00---------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................ATTACAGGTGTGGGCTGTTG..............................................................................................................................................................................................................................................................2011.001.00---------------------------------------------------1.00-----------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGTCGGGCAAACAGAA2011.001.00---------1.00-----------------------------------------------------------------------------------------------------------------
.....................................................................................................TTTTTGCTTGGGCCTGAGTGCAGTGGCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00--1.00------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAACTGAGAACAAAGCCAAGTCGGT.........2911.003.00--------------------1.00------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAACAAAGCCAAGTCGGGCAAACAGT.291.000.00--------------------1.00------------------------------------------------------------------------------------------------------
........................................................................................................TTGCTTGGGCCTGAGCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-----------------------------------------------------1.00---------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGAGAACAAAGCCAAGTCGGGCAA......2711.001.00---------------1.00-----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAACAAAGCCAAGTCGGGCA.......2211.001.00-------------------------------------1.00-------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAACTGAGAACAAAGC..................2011.001.00---------------------------------1.00-----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTGAGAACAAAGCCAAGTCGGGCAA......2911.001.00-------------------------1.00-------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTGCCTGG.......................................................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------------------------------1.00---------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGCAAAACTGAGAA........................1811.001.00--------------------------------------------------------------------------1.00------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAACTGAGAACAAAGCCAAG..............2211.001.00------------------------------1.00--------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCAAAACTGAGAACAAAG...................2211.001.00-----------------------------------1.00---------------------------------------------------------------------------------------
...............................................................................................................................................................................................AAGTAGCTGGGACTACAGAAGCCAGA........................................................................................................................................................................................................................................................................................................................................................................................261.000.00--------------------------1.00------------------------------------------------------------------------------------------------
.................ATTAAGCCATCAAATGTGGAACCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00----1.00----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGTTTGGGCTTTGCAAA................................2011.001.00-----------1.00---------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCCAAGTCGGGCAAACAGAA2311.001.00----------------------------------------1.00----------------------------------------------------------------------------------
..............................................................................................................................................................................................CAAGTAGCTGGGACTACCG................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------1.00------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAACTGAGAACAAAGCCAAG..............2411.001.00-------------1.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCAAAACTGAGAACAAAGCCAAGTCGG..........3011.001.00----------------------------------------------------------------------------------------1.00----------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAACAAAGCCAAGTCGGGCAAA.....2511.001.00-------------------------------------------------------1.00-------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGTTTGGGCTTTGCAA.................................1911.001.00-----------1.00---------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................TAGCAGACACGGGCTTTC...............................................................................................................................................................................................................................................................................................................................................1811.001.00--1.00------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................CTGAGAGATGAGTTCTGATGCAGAAA.............................................................................................................................................................................................................................2611.001.00------------------------------------------------------1.00--------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGGAAGACAACTGACGTG........................................................................................................................................................................221.000.00------------------1.00--------------------------------------------------------------------------------------------------------
...............................................................................................TTGGTTTTTTTGCTTCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00--1.00------------------------------------------------------------------------------------------------------------------------
..............................ATGTGGAACCTATGGAAAAGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00---------------------------1.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTGGT..........................................................................................................................................................................................................................................................181.000.00------1.00--------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGTGGAAAATGGGGTA..........................................................................................................191.000.00---------------------------------------------------------------1.00-----------------------------------------------------------
....................................................................................................................................TCACAACTCACTGCACCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00------------------1.00--------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGAGAACAAAGCCAAGTCGGGCAAA.....2811.001.00-----------------------------------------------------------1.00---------------------------------------------------------------
...AAACTAATCCTGATATCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00------------------1.00--------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAACAAAGCCAAGTCGGGCAAAC....2611.001.00-----------------------------------------1.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGAGAACAAAGCCAAGTCGGGCAAAC....2911.001.00----1.00----------------------------------------------------------------------------------------------------------------------
.......................................CTATGGAAAAGGTATGGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------------------------------------------------------------------1.00--------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAAGTCGGGCAAACAG..1911.001.00-----------------------------------------------------------------1.00---------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGTTTGGGCTTTGCAAAAC..............................2211.001.00-----------1.00---------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAAAGCCAAGTCGGGCA.......2111.001.00-------------------------------------1.00-------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGAGGAAGACAACTGA............................................................................................................................................................................1911.001.00-----------------------------------------------------------------------------------1.00---------------------------------------
..............................ATGTGGAACCTATGGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-----------------------1.00---------------------------------------------------------------------------------------------------
...........................CAAATGTGGAACCTATGGAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-------------------------------------------------------------------------------1.00-------------------------------------------
.......................................................................................................TTTGCTTGGGCCTGAGTGCAGTGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00--1.00------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAGGGCTGCTACTCAGCTGT.......................................................................................................................2411.001.00--------------------------------------------------1.00------------------------------------------------------------------------
..........................TCAAATGTGGAACCTATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----1.00----------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCAAGTCGGGCAAACAGA.2111.001.00----------------------------------------------1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................AGTGATCCACCCAACTCAGCCCCC...............................................................................................................................................................................................................................................................................................241.000.00-----1.00---------------------------------------------------------------------------------------------------------------------
...................................................................................................................................ATCACAACTCACTGCAACCTGGGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................261.000.00-----1.00---------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................AGTAGCTGGGACTACAGAAGCACACCCC.....................................................................................................................................................................................................................................................................................................................................................................................281.000.00-----1.00---------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGCCAAGTCGGGCAAACAGA.2311.001.00--------------------------------------------------------------------------------------1.00------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAACTGAGAACAAAGCCAAGTC............2611.001.00--------------------1.00------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................ATCACGCCTGGCTAATAGC....................................................................................................................................................................................................................................................................................................................................................................191.000.00----------------------------------------------------------------------------1.00----------------------------------------------
.............................................................................................TTTTGGTTTTTTTGCTGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00----------------------1.00----------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................GCTGAGAGATGAGTTCTGATGCAG................................................................................................................................................................................................................................2411.001.00---------------1.00-----------------------------------------------------------------------------------------------------------
...............................TGTGGAACCTATGGAAAAGGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................231.000.00---------------------------------------1.00-----------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGTGGAAAATGGAGTTAGAGGTTACAA...............................................................................................301.000.00-------------------------------------------------------------------------------------1.00-------------------------------------
.................................................................................................................................................................................................GTAGCTGGGACTACAGAAGCGCGA........................................................................................................................................................................................................................................................................................................................................................................................241.000.00---------------1.00-----------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAAGCCAAGTCGGGCA.......1911.001.00-----------------------------------------------1.00---------------------------------------------------------------------------
................................................................................TCAGGGGTTTTGATTTTGGTCTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.00--1.00------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGCTGTGGAAAATGGAG............................................................................................................2011.001.00---------------------------------------------------------------------------------1.00-----------------------------------------
........................................................................................TTTGATTTTGGTTTTTTTTTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00-----1.00---------------------------------------------------------------------------------------------------------------------
.................ATTAAGCCATCAAATGTGGAACCTACGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................291.000.00--1.00------------------------------------------------------------------------------------------------------------------------
.....................AGCCATCAAATGTGGAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---------1.00-----------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAAAACTGAGAACAAAGCCAAGTCGGG.........3011.001.00--------------------------------------------------------------------------------------------------1.00------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGTCGGGCAAACAGA.1911.001.00-------1.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGAGAACAAAGCCAAGTCGGGCAAA.....2911.001.00-------------------------1.00-------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCTACTCAGCTGTGGAAAA.................................................................................................................2311.001.00--------------------------------------1.00------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AAGCACACCATCACGCCCGTG...........................................................................................................................................................................................................................................................................................................................................................................211.000.00-----------------1.00---------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCTTTGCAAAACTGAGAACAAAG...................2611.001.00---------------1.00-----------------------------------------------------------------------------------------------------------
................................................................................................TGGTTTTTTTGCTTGGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00--1.00------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAACAAAGCCAAGTCGGG.........2011.001.00----1.00----------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGAGAACAAAGCCAAGTCGGGCAAAAAG..3111.001.00-------------------1.00-------------------------------------------------------------------------------------------------------
..............................ATGTGGAACCTATGGAAAAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----1.00----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................CCATCACGCCTGGCTAATCTC....................................................................................................................................................................................................................................................................................................................................................................211.000.00----------------------1.00----------------------------------------------------------------------------------------------------
..............................ATGTGGAACCTATGGAAAAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-------------1.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGCCAAGTCGGGCAA......1811.001.00-----------------------1.00---------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GATCCACCCAACTCAGCCTCAT..............................................................................................................................................................................................................................................................................................221.000.00----------------------1.00----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGTTTGGGCTTTGCAAAA...............................2111.001.00---------------------------------------------------------------------------------------------1.00-----------------------------
.........................................................................................................TGCTTGGGCCTGAGTGCAGTGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00--1.00------------------------------------------------------------------------------------------------------------------------
.............................................................................................................TGGGCCTGAGTGCAGGTAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------1.00---------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................TGTGGGCTGTTGTGCCTGGCTGAGAGACG.............................................................................................................................................................................................................................................291.000.00--1.00------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTCGGGCAAACAGA.1711.001.00--------------------------------------------------------------------1.00------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTTAACAACTGCTACT.......................................................................................................................................191.000.00-------------------------------------------------------------------------------------------------1.00-------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGTGGAAAATGGAGTTAGAGG.....................................................................................................2511.001.00----1.00----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAAAGCCAAGTCGG..........1811.001.00----------------------------------------------------------------------------------------------1.00----------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAAGCCAAGTCGG..........1611.001.00-------------1.00-------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAACTGAGAACAAAGCCAAGTCGGGCA.......3011.001.00-------------------------1.00-------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGTGGAAAATGGCTTT..........................................................................................................191.000.00------------------------------------------------------------------------1.00--------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAACAAAGCCAAGTCGGGCAAAC....2511.001.00--------------------------------------------------------1.00------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................GTGCCTGGCTGAGAGATGAGTTCTGATGCAG................................................................................................................................................................................................................................3111.001.00----------------------------------1.00----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTGAGAACAAAGCCAAGTCGGG.........2611.001.00------------------------------------------------------------------------------------1.00--------------------------------------
........................................................................................TTTGATTTTGGTTTTTTAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00------------------------------------------------------------------1.00--------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCTGCTACTCAGCTG........................................................................................................................1811.001.00-----------------------------------------------------------------------------------------------1.00---------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGAGAACAAAGCCAAGTCGG..........2311.001.00-------------1.00-------------------------------------------------------------------------------------------------------------
...............................................................................................................GGCCTGAGTGCAGTGTGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------------------------------1.00--------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................TTGTGCCTGGCTGAGGAGC..............................................................................................................................................................................................................................................191.000.00---------------------1.00-----------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAAGCCAAGTCGGGCA.......2011.001.00-------1.00-------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................GCCTGGCTGAGAGATTTGC..........................................................................................................................................................................................................................................191.000.00-----------------------------1.00---------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTTAA..........................................................................................................................................................................................................................................................1850.800.20-0.60----0.20--------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................CAAGTAGCTGGGACTACAGAAGCACAC........................................................................................................................................................................................................................................................................................................................................................................................2720.500.50-------------------------------------------------------------------------------------------------------0.50-------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGAGGAAGACAACTG.............................................................................................................................................................................1820.500.50------------------------------------------------------------------------------------------------------0.50--------------------
................................................................................................................................................................................................AGTAGCTGGGACTACAGAAGCACACCAT.....................................................................................................................................................................................................................................................................................................................................................................................2820.500.50---------------0.50-----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTTTG..........................................................................................................................................................................................................................................................1850.400.200.20-------------------------------------------0.20------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTTGT..........................................................................................................................................................................................................................................................1850.400.20-0.20------------0.20------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................TAGCTGGGACTACAGAAGCACACCA......................................................................................................................................................................................................................................................................................................................................................................................2580.250.25--0.25------------------------------------------------------------------------------------------------------------------------
.........................ATCAAATGTGGAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1540.250.25---------------------------------0.25-----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTTA...........................................................................................................................................................................................................................................................1750.200.20----------------0.20----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGT.............................................................................................................................................................................................................................................................1550.200.20--------------0.20------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTAAA..........................................................................................................................................................................................................................................................1850.200.20-0.20-------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTCTA..........................................................................................................................................................................................................................................................1850.200.200.20--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTTGG..........................................................................................................................................................................................................................................................1850.200.20-----------------------------------------------------------------------------------------------------------------0.20---------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTTAAA.........................................................................................................................................................................................................................................................1950.200.200.20--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTAATT.........................................................................................................................................................................................................................................................1950.200.20----------------------------------------------------------------------------------------------------------------------0.20----
.....................................................................................................................................................................................................................................................................................................................................GGTGTGGGCTGTTGTAAAA.........................................................................................................................................................................................................................................................1950.200.200.20--------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................ACCACCCAGGCTCAAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................1990.110.11--------------------------------------------------------------------------------------------------------------------------0.11

Antisense strand
TTGAAACTAATCCTGATATTAAGCCATCAAATGTGGAACCTATGGAAAAGGTATGATTAGGTCTCTTTATGAATGAGAGATCAGGGGTTTTGATTTTGGTTTTTTTGCTTGGGCCTGAGTGCAGTGGCACAATCACAACTCACTGCAACCTGGACCACCCAGGCTCAAGCAGTCTTACCACCTCAGTCTCCAAGTAGCTGGGACTACAGAAGCACACCATCACGCCTGGCTAATTTTTTTTAGCAGACACGGGCTTTCACTATATTGCCAAGGCTGGTCTCAAGTGATCCACCCAACTCAGCCTCCCGAAGTTTCTGGTATTACAGGTGTGGGCTGTTGTGCCTGGCTGAGAGATGAGTTCTGATGCAGAAATAAAAGCACATCCACAGGCTGCTGAGCTTCTTGGGAGGAAGACAACTGAGTTCAGACTCCATCTTACCTATTTAACAACTGCAAGGGCTGCTACTCAGCTGTGGAAAATGGAGTTAGAGGTTACAGTTGCTCTACTTCTAATTTTGTGTTATTTCCCCCTTTATCCTCTAGGAGTTTGGGCTTTGCAAAACTGAGAACAAAGCCAAGTCGGGCAAACAGAA
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................(((((..(((....)))...(((((((..((((((((((............))))))))))..))....))))))))))............................................................
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................444................................................................................................543................................................
SizePerfect hitTotal NormPerfect NormSRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR037937(GSM510475)
293cand2. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR189782SRR189784TAX577742(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577745(Rovira)
total RNA. (breast)
SRR037938(GSM510476)
293Red. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR040035(GSM532920)
G001T. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
TAX577588(Rovira)
total RNA. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR189787GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343336SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343337SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR029131(GSM416760)
MCF7. (cell line)
SRR040034(GSM532919)
G001N. (cervix)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038854(GSM458537)
MM653. (cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR038853(GSM458536)
MELB. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
.....................................................................................................................................................CTGGACCACCCAGGCTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................... 186.000.00--------2.00----------1.00--1.00-------1.00---------------------------1.00----------------------------------------------------------------
..........................................................................................................................AGTGGCACAATCACAACTCACTGCCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................ 273.000.00------------3.00--------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTACCTATTTAAATAG.............................................................................................................................................. 192.000.00-------------------------------------------2.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................CAACTCAGCCTCCCGAAAGAG....................................................................................................................................................................................................................................................................................... 212.000.00-----2.00---------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................CTGGACCACCCAGGCTGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................... 192.000.00-------------------1.00----------1.00--------------------------------------------------------------------------------------------
..........................................................................................................................AGTGGCACAATCACAACTCACTGCACTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................... 282.000.00------------2.00--------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................CTGGACCACCCAGGCCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................... 182.000.00---------------------------------------------------------1.00---------1.00-------------------------------------------------------
...............................................................................................................................CACAATCACAACTCACTGTAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................. 211.000.00------------1.00--------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCAGTCTCCAAGTAGCCG......................................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00--------------------------------1.00------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TCCACCCAACTCAGCCTCCAC............................................................................................................................................................................................................................................................................................. 211.000.00-----1.00---------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................CCCAACTCAGCCTCCCGCGA.......................................................................................................................................................................................................................................................................................... 201.000.00---------------------------------------------------------------------------------------1.00-----------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTACCTATTTAACAC............................................................................................................................................... 181.000.00-------------------------------------------------------------------------1.00-------------------------------------------------
.............................................................................................TTTTGGTTTTTTTGCAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 191.000.00---------------------------------------------------------------------1.00-----------------------------------------------------
......................................................................................................................................................................................................................................TAATTTTTTTTAGCACTAA........................................................................................................................................................................................................................................................................................................................................................ 191.000.00-----------------1.00---------------------------------------------------------------------------------------------------------
...............................................................................................................................................................CAGGCTCAAGCAGTCTTCGGA............................................................................................................................................................................................................................................................................................................................................................................................................................. 211.000.00-----1.00---------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................GGCTGGTCTCAAGTGATGGGA............................................................................................................................................................................................................................................................................................................. 211.000.00--1.00------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGATGGAGTCTGAACT........................................................................................................................................................... 1811.001.00----------------------------1.00----------------------------------------------------------------------------------------------
.....................................................................................................................................................................CAAGCAGTCTTACCACCTCATA...................................................................................................................................................................................................................................................................................................................................................................................................................... 221.000.00--------------------------------------------------------------1.00------------------------------------------------------------
.......................................................................................................................................................................................................................ACCATCACGCCTGGCTACTC...................................................................................................................................................................................................................................................................................................................................................................... 201.000.00----------------------------------------------------------------1.00----------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAGGGCTGCTAATCT............................................................................................................................ 191.000.00-----------------1.00---------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGTTAGAGGTTACTCT.............................................................................................. 191.000.00------------------------------------------------------------------------------------------------1.00--------------------------
.....................................................................................................................................................CTGGACCACCCAGGCAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00--------1.00------------------------------------------------------------------------------------------------------------------
........................................................................CCCCTGATCTCTCAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1511.001.00--------------------------------------------------------------------------------------------1.00------------------------------
.....................................................................................................................................................................................................................ACACCATCACGCCTGAAA.......................................................................................................................................................................................................................................................................................................................................................................... 181.000.00----------------------------------------------------------------------1.00----------------------------------------------------
.....................................................................................................................................................CTGGACCACCCAGGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................... 171.000.00---------------------------------------1.00-----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................GGTGGATCACTTGAGA............................................................................................................................................................................................................................................................................................................ 1601.001.00----------------------------------------------------------------------------------1.00----------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTAGAAGTAGAGCAACTGTAACC............................................................................. 2611.001.00----------------------------------------------------1.00----------------------------------------------------------------------
....................................................................................................................................................CCTGGACCACCCAGGCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00-------------------1.00-------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................TTGCCAAGGCTGGTCTCAGCG.................................................................................................................................................................................................................................................................................................................... 211.000.00--1.00------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGTTACAGTTGCG.......................................................................................... 161.000.00-------------------------------------------------------------------------------------------1.00-------------------------------
..................................................................................AGGGGTTTTGATTTTGGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00------------------1.00--------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................GACTACAGAAGCACATCTG..................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00-------------------------------------------------1.00-------------------------------------------------------------------------
............................................................................................................................TGGCACAATCACAACGCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 191.000.00---------------------------------------------------------------------------1.00-----------------------------------------------
..............................................................................................................................................................................................................................CGCCTGGCTAATTTTTTGAAC.............................................................................................................................................................................................................................................................................................................................................................. 211.000.00------------------------------------------1.00--------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTAGAGCAACTGT................................................................................... 1630.330.33-------------------------------------------------0.33-------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................ACTTCGGGAGGCTGAGTTGGGTGGA......................................................................................................................................................................................................................................................................................... 2530.330.33--0.33------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTAACCTCTAACTC............................................................................................. 1830.330.33-------------------------------------------------------------------------------------------------------------0.33-------------
.............................................................................................................................................................................................................................................................................................TCGGGAGGCTGAGTTGGGTGGATC............................................................................................................................................................................................................................................................................................ 2440.250.25--0.25------------------------------------------------------------------------------------------------------------------------
.............................CATAGGTTCCACATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1590.110.11----------------------------------------------------0.11----------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................GGATGTGCTTTTATTT................................................................................................................................................................................................................ 1690.110.11-----------------0.11---------------------------------------------------------------------------------------------------------