ID: uc011bbg.1_intron_3_0_chr3_48309651_f.5p
GENE: (4)
chr3:48309601-48309850+


(1)
AGO2.ip 		(2)
B-CELL 		(3)
BRAIN 		(6)
BREAST 		(13)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(1)
HEART 		(1)
LIVER 		(3)
OTHER 		(8)
SKIN 		(1)
TESTES

Sense strand
TGAAGCAGAAGATCAACGAGTGGAAGGAGGCGTCAGACCCTTGTTTTGGAGTACAAATGAAAGGGGGGCTTTAGTGGGTTTCTCTAGCCTGTTCCAGAGACCACCAATAAGCTCTTGGGGAGGCAACAGAATATTAGAGATACAGCTCAGTCCAGCCCAGAATGCAAGCTCTGAGGAAGTAGACAGAATTTCCAAGAGGGCAGAAACCCCAGGGTTTGGAGCAGTCACGTTTGGGGAGTGTGCACTAGCT
........................................................................................................................................(((......))).(((...((((((........)))).)).....)))..................................................................
..................................................................................................................115.........................................................................191.........................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189782SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR189787SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		TAX577579(Rovira)
total RNA. (breast)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040037(GSM532922)
G243T. (cervix)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSM956925PAZD5SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)
..................................................................................................................................................................TGCAAGCTCTGAGGAAGTAGACAGA...............................................................25125.0025.0025.00---------------------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAATAAAT.........................................................227.000.00----2.001.001.00-----1.00-----------------1.00----1.00----
.............................................................................................................................................................CAGAATGCAAGCTCTGAGGAAGTAGAC..................................................................2716.006.006.00---------------------------------------
.............................................................................................................................................................CAGAATGCAAGCTCTGAGGAAGTAGA...................................................................2615.005.005.00---------------------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAATAGAT.........................................................225.000.00--1.00---------1.00---2.00-----------1.00-----------
...........................................................................................................................................................................TGAGGAAGTAGACAGAATAGTT.........................................................223.000.00----2.00---------1.00-------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAATAAAC.........................................................223.000.00-----2.00----1.00-----------------------------
..................................................................................................................................................................................................................................ACGTTTGGGGAGTGTGCACTAGCC242.000.00-2.00--------------------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAATAG...........................................................202.000.00-----------1.00--------------------------1.00-
..................................................................................................................................................................TGCAAGCTCTGAGGAAGTAGACAG................................................................2412.002.002.00---------------------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAAGAGA..........................................................212.000.00--1.00--------1.00----------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAAGAG...........................................................202.000.00--1.001.00------------------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAACAG...........................................................202.000.00---2.00------------------------------------
.......................................................................................................................GAGGCAACAGAATATTAGAGAT.............................................................................................................2212.002.00---------2.00------------------------------
...............................................................................................................................................................GAATGCAAGCTCTGAGGAAGTAGACA.................................................................2612.002.002.00---------------------------------------
...................................................................................................................................................................................TAGACAGAATTTCCAAGAGGGCAGAAAC...........................................2811.001.001.00---------------------------------------
.............................................................................................................................................................................................................................CAGTCACGTTTGGGGAGTGTGCACTA...2611.001.00---1.00------------------------------------
.......GAAGATCAACGAGTGGAAGG...............................................................................................................................................................................................................................2011.001.00---------1.00------------------------------
................................................................................................................................................................AATGCAAGCTCTGAGGAAGTAG....................................................................2211.001.00-------------------------------1.00--------
...........................................................................................................................................................................TGAGGAAGTAGACAGAATCGAT.........................................................221.000.00------1.00---------------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAGTAA...........................................................201.000.00------1.00---------------------------------
..................................................................................................................................................................TGCAAGCTCTGAGGAAGTAGACA.................................................................2311.001.001.00---------------------------------------
........................AGGAGGCGTCAGACCAGTC...............................................................................................................................................................................................................191.000.00---------------------------------------1.00
.................................................................................................................................................................................AGTAGACAGAATTTCCAAGAGGGCAGAAAC...........................................3011.001.00---------------------------------1.00------
...........................................................................................................................................................................TGAGGAAGTAGACAGAC..............................................................171.000.00-------------1.00--------------------------
.............................................................................................................................................ACAGCTCAGTCCAGCCCAGAATGCAAGC.................................................................................2811.001.001.00---------------------------------------
............................................................AAGGGGGGCTTTAGTGGGTTTCTC......................................................................................................................................................................2411.001.00-1.00--------------------------------------
.....................................................................................................CACCAATAAGCTCTTGGGGA.................................................................................................................................2011.001.00----------------------------------1.00-----
...........................................................................................................................................................................TGAGGAAGTAGACAGAAAAA...........................................................201.000.00---------------1.00------------------------
........................................TTGTTTTGGAGTACAAATGAAAGGGGG.......................................................................................................................................................................................2711.001.001.00---------------------------------------
...........................................TTTTGGAGTACAAATGAAAGG..........................................................................................................................................................................................2111.001.001.00---------------------------------------
...............................................................................................................................................................GAATGCAAGCTCTGAGGAAGTAGA...................................................................2411.001.001.00---------------------------------------
..................................................................................................................................................................TGCAAGCTCTGAGGAAGTAGACAGAA..............................................................2611.001.001.00---------------------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAATTAAT.........................................................221.000.00----------1.00-----------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGTCTA............................................................191.000.00-------------1.00--------------------------
...............................................................................................................................................................GAATGCAAGCTCTGAGGAAGTAGAC..................................................................2511.001.001.00---------------------------------------
.........AGATCAACGAGTGGAAGGAGGCGCC........................................................................................................................................................................................................................251.000.00-1.00--------------------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAGGAA...........................................................201.000.00---------------1.00------------------------
........................................................................................................................................................................CTCTGAGGAAGTAGACAGAATTTC..........................................................2411.001.00---------------------1.00------------------
...............ACGAGTGGAAGGAGGCGTCAGACCCTG................................................................................................................................................................................................................271.000.00-1.00--------------------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAAGAC...........................................................201.000.00-------1.00--------------------------------
...................................................................................................................................................CAGTCCAGCCCAGAATGCAAG..................................................................................2111.001.00-------------------------1.00--------------
................................................................................................................................................................................AAGTAGACAGAATTTCCAAGAGG...................................................2311.001.001.00---------------------------------------
................................................................................................................................................................................AAGTAGACAGAATTTCCAAGAGAG..................................................241.000.00-1.00--------------------------------------
...........................................................................................................TAAGCTCTTGGGGAGGCAACAGAAT......................................................................................................................2511.001.001.00---------------------------------------
.......................AAGGAGGCGTCAGACAAGT................................................................................................................................................................................................................191.000.00----------------------1.00-----------------
................................................................................................................TCTTGGGGAGGCAACAGAA.......................................................................................................................1911.001.00------------------1.00---------------------
..................................................................................................................................................................................................AGAGGGCAGAAACCCCAGGGTTTGGAGCAGCC........................321.000.00-1.00--------------------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAATAGA..........................................................211.000.00--1.00-------------------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAATTGCT.........................................................221.000.00-------1.00--------------------------------
...........................................................................................................................................................................................................................AGCAGTCACGTTTGGGGAGTGTGCACTAG..2911.001.00-1.00--------------------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAACA............................................................191.000.00--1.00-------------------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGTATA............................................................191.000.00---1.00------------------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAATAGT..........................................................211.000.00-------1.00--------------------------------
.............................................................................................................................ACAGAATATTAGAGATACAGCTCAGT...................................................................................................2611.001.00-------------------------------------1.00--
...........................................................................................................................................................................TGAGGAAGTAGACAGAATAAT..........................................................211.000.00-----1.00----------------------------------
........................................................................................................................................................................CTCTGAGGAAGTAGACAGA...............................................................1911.001.00--------1.00-------------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAATAT...........................................................201.000.00--------------------1.00-------------------
.....................GGAAGGAGGCGTCAGACC...................................................................................................................................................................................................................1811.001.00--------1.00-------------------------------
.............................................................................................................................................................................AGGAAGTAGACAGAATTT...........................................................1811.001.00--------1.00-------------------------------
..............................................................................................................................................................AGAATGCAAGCTCTGAGGAAGTAGA...................................................................2511.001.001.00---------------------------------------
................................................................................................................................................................................AAGTAGACAGAATTTCCAAGAGGGCA................................................2611.001.001.00---------------------------------------
.GAAGCAGAAGATCAAGG........................................................................................................................................................................................................................................171.000.00------------------------1.00---------------
...........................................................................................................................................................................................................................AGCAGTCACGTTTGGGGAGTGTGCACCAG..291.000.00-1.00--------------------------------------
............................................TTTGGAGTACAAATGAAAGGGGGGC.....................................................................................................................................................................................2511.001.001.00---------------------------------------
...........................................................................................................................................................................TGAGGAAGTAGACAGAATAAA..........................................................211.000.00------1.00---------------------------------
............................................................................................................................................................CCAGAATGCAAGCTCTGAGGAAGTAGAC..................................................................2811.001.001.00---------------------------------------
.....CAGAAGATCAACGAGTGGAAG................................................................................................................................................................................................................................2111.001.00---------------------------1.00------------
.........AGATCAACGAGTGGAAGGAGGCGTCAGACCCTG................................................................................................................................................................................................................331.000.00-1.00--------------------------------------
............................................................................................................................................................................GAGGAAGTAGACAGAATTTCCAAGAGGGC.................................................2911.001.001.00---------------------------------------
.............................................................................................................................................................CAGAATGCAAGCTCTGAGGAAGTAG....................................................................2511.001.00--------------1.00-------------------------

Antisense strand
TGAAGCAGAAGATCAACGAGTGGAAGGAGGCGTCAGACCCTTGTTTTGGAGTACAAATGAAAGGGGGGCTTTAGTGGGTTTCTCTAGCCTGTTCCAGAGACCACCAATAAGCTCTTGGGGAGGCAACAGAATATTAGAGATACAGCTCAGTCCAGCCCAGAATGCAAGCTCTGAGGAAGTAGACAGAATTTCCAAGAGGGCAGAAACCCCAGGGTTTGGAGCAGTCACGTTTGGGGAGTGTGCACTAGCT
........................................................................................................................................(((......))).(((...((((((........)))).)).....)))..................................................................
..................................................................................................................115.........................................................................191.........................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189782SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR189787SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		TAX577579(Rovira)
total RNA. (breast)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040037(GSM532922)
G243T. (cervix)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSM956925PAZD5SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)
......................CAAAACAAGGGTCTGACGCCTCCTTC.......................................................................................................................................................................................................... 2612.002.00-----------------1.00-----------1.00----------
......................AAACAAGGGTCTGACGCCTCCTTC............................................................................................................................................................................................................ 2411.001.00--------------------------------1.00-------
......................GTCTGACGCCTCCTTC.................................................................................................................................................................................................................... 1611.001.00-----------------------1.00----------------
.................................................................................................................................................CTCAGTCCAGCCCAGGATC...................................................................................... 191.000.00--------------------------1.00-------------
............................................................................................................................................................................................................CCCAAACGTGACTGCTCCAAACCCTGGGGTT............... 3111.001.00------------------------------------1.00---
....................................................................................................................................................................................................................CACTCCCCAAACGTGACTGCTCCAAACC.......... 2811.001.00-------------------1.00--------------------
.............................................................................................................................................GCTGGACTGAGCTGT.............................................................................................. 1590.110.11-----------------0.11----------------------